RNA–Protein interactions for RNA: ENST00000431556.6

YIF1A-204, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 619 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-204ENST00000431556 NISCHQ9Y2I1 1504 aa38.27■■■■□ 3.72
YIF1A-204ENST00000431556 CCDC180Q9P1Z9 1646 aa34.04■■■■□ 3.04
YIF1A-204ENST00000431556 ABCC9O60706 1549 aa33.36■■■□□ 2.93
YIF1A-204ENST00000431556 RB1CC1Q8TDY2 1594 aa32.03■■■□□ 2.72
YIF1A-204ENST00000431556 NACADO15069 1562 aa31.98■■■□□ 2.71
YIF1A-204ENST00000431556 DCAF8L2P0C7V8 631 aa31.97■■■□□ 2.71
YIF1A-204ENST00000431556 ZCCHC6Q5VYS8 1495 aaKnown RBP31.9■■■□□ 2.7
YIF1A-204ENST00000431556 MYO15BQ96JP2 1530 aa31.75■■■□□ 2.67
YIF1A-204ENST00000431556 DCAF1Q9Y4B6 1507 aa31.63■■■□□ 2.65
YIF1A-204ENST00000431556 UNC13AQ9UPW8 1703 aa31.39■■■□□ 2.62
YIF1A-204ENST00000431556 PABPN1Q86U42 306 aaKnown RBP eCLIP31.16■■■□□ 2.58
YIF1A-204ENST00000431556 BICRAQ9NZM4 1560 aa31.12■■■□□ 2.57
YIF1A-204ENST00000431556 SCRIBQ14160 1630 aa31.12■■■□□ 2.57
YIF1A-204ENST00000431556 SHROOM4Q9ULL8 1493 aa30.7■■■□□ 2.5
YIF1A-204ENST00000431556 DNAJC5BQ9UF47 199 aa30.63■■■□□ 2.49
YIF1A-204ENST00000431556 EIF4G1Q04637 1599 aaKnown RBP30.28■■■□□ 2.44
YIF1A-204ENST00000431556 CC2D2AQ9P2K1 1620 aa30.17■■■□□ 2.42
YIF1A-204ENST00000431556 CECR2Q9BXF3 1484 aa29.94■■■□□ 2.38
YIF1A-204ENST00000431556 SMARCA4P51532 1647 aa29.73■■■□□ 2.35
YIF1A-204ENST00000431556 BAZ1AQ9NRL2 1556 aaPredicted RBP29.65■■■□□ 2.34
YIF1A-204ENST00000431556 ATAD2BQ9ULI0 1458 aa29.55■■■□□ 2.32
YIF1A-204ENST00000431556 MROH2BQ7Z745 1585 aa29.53■■■□□ 2.32
YIF1A-204ENST00000431556 NCAPD3P42695 1498 aa29.49■■■□□ 2.31
YIF1A-204ENST00000431556 SMARCA2P51531 1590 aa29.49■■■□□ 2.31
YIF1A-204ENST00000431556 PEG3Q9GZU2 1588 aa29.39■■■□□ 2.3
YIF1A-204ENST00000431556 HMGXB3Q12766 1538 aa29.39■■■□□ 2.3
YIF1A-204ENST00000431556 BAZ1BQ9UIG0 1483 aaKnown RBP29.3■■■□□ 2.28
YIF1A-204ENST00000431556 WIZO95785 1651 aa29.23■■■□□ 2.27
YIF1A-204ENST00000431556 RSF1Q96T23 1441 aaPredicted RBP29.15■■■□□ 2.26
YIF1A-204ENST00000431556 TOP2AP11388 1531 aaKnown RBP28.89■■■□□ 2.21
YIF1A-204ENST00000431556 NESP48681 1621 aa28.88■■■□□ 2.21
YIF1A-204ENST00000431556 LAMC3Q9Y6N6 1575 aa28.75■■■□□ 2.19
YIF1A-204ENST00000431556 ERCC6Q03468 1493 aa28.72■■■□□ 2.19
YIF1A-204ENST00000431556 CADPSQ9ULU8 1353 aa28.64■■■□□ 2.18
YIF1A-204ENST00000431556 KIF21AQ7Z4S6 1674 aa28.54■■■□□ 2.16
YIF1A-204ENST00000431556 CCDC88BA6NC98 1476 aa28.53■■■□□ 2.16
YIF1A-204ENST00000431556 PDS5BQ9NTI5 1447 aa28.52■■■□□ 2.16
YIF1A-204ENST00000431556 CFTRP13569 1480 aa28.48■■■□□ 2.15
YIF1A-204ENST00000431556 THOC2Q8NI27 1593 aaKnown RBP28.45■■■□□ 2.14
YIF1A-204ENST00000431556 CUX2O14529 1486 aa28.41■■■□□ 2.14
YIF1A-204ENST00000431556 SUPT5HO00267 1087 aaKnown RBP28.41■■■□□ 2.14
YIF1A-204ENST00000431556 FANCD2Q9BXW9 1451 aa28.35■■■□□ 2.13
YIF1A-204ENST00000431556 CEP164Q9UPV0 1460 aa28.31■■■□□ 2.12
YIF1A-204ENST00000431556 PRDM2Q13029 1718 aa28.31■■■□□ 2.12
YIF1A-204ENST00000431556 MRC2Q9UBG0 1479 aa28.27■■■□□ 2.12
YIF1A-204ENST00000431556 WDR62O43379 1518 aa28.19■■■□□ 2.1
YIF1A-204ENST00000431556 URB2Q14146 1524 aaKnown RBP28.09■■■□□ 2.09
YIF1A-204ENST00000431556 TOPBP1Q92547 1522 aa27.91■■■□□ 2.06
YIF1A-204ENST00000431556 DNMBPQ6XZF7 1577 aa27.86■■■□□ 2.05
YIF1A-204ENST00000431556 ABCC8Q09428 1581 aa27.82■■■□□ 2.04
YIF1A-204ENST00000431556 CUX1P39880 1505 aa27.71■■■□□ 2.03
YIF1A-204ENST00000431556 IFT140Q96RY7 1462 aa27.7■■■□□ 2.03
YIF1A-204ENST00000431556 POLA1P09884 1462 aaPredicted RBP27.67■■■□□ 2.02
YIF1A-204ENST00000431556 ZNF608Q9ULD9 1512 aaPredicted RBP27.63■■■□□ 2.01
YIF1A-204ENST00000431556 TARBP1Q13395 1621 aaKnown RBP27.61■■■□□ 2.01
YIF1A-204ENST00000431556 FGD5Q6ZNL6 1462 aa27.6■■■□□ 2.01
YIF1A-204ENST00000431556 RAD54L2Q9Y4B4 1467 aa27.57■■■□□ 2
YIF1A-204ENST00000431556 DNAJC5Q9H3Z4 198 aa27.53■■■□□ 2
YIF1A-204ENST00000431556 EIF4G3O43432 1585 aaKnown RBP27.52■■■□□ 2
YIF1A-204ENST00000431556 SOGA1O94964 1423 aa27.52■■■□□ 2
YIF1A-204ENST00000431556 WRNQ14191 1432 aaPredicted RBP eCLIP27.48■■□□□ 1.99
YIF1A-204ENST00000431556 SYNJ1O43426 1573 aa27.48■■□□□ 1.99
YIF1A-204ENST00000431556 AQRO60306 1485 aaKnown RBP eCLIP27.45■■□□□ 1.992e-6■■■■□ 20
YIF1A-204ENST00000431556 BIVM-ERCC5R4GMW8 1640 aa27.45■■□□□ 1.98
YIF1A-204ENST00000431556 TOP2BQ02880 1626 aa27.44■■□□□ 1.98
YIF1A-204ENST00000431556 WDR97A6NE52 1622 aa27.41■■□□□ 1.98
YIF1A-204ENST00000431556 TDRD9Q8NDG6 1382 aaKnown RBP27.39■■□□□ 1.98
YIF1A-204ENST00000431556 ABCA10Q8WWZ4 1543 aa27.31■■□□□ 1.96
YIF1A-204ENST00000431556 ABCA5Q8WWZ7 1642 aa27.24■■□□□ 1.95
YIF1A-204ENST00000431556 GAPVD1Q14C86 1478 aa27.22■■□□□ 1.95
YIF1A-204ENST00000431556 SNAPC4Q5SXM2 1469 aa27.22■■□□□ 1.95
YIF1A-204ENST00000431556 PBRM1Q86U86 1689 aa27.21■■□□□ 1.95
YIF1A-204ENST00000431556 GRIN2BQ13224 1484 aa27.21■■□□□ 1.95
YIF1A-204ENST00000431556 CHD1O14646 1710 aa27.2■■□□□ 1.94
YIF1A-204ENST00000431556 OSCARQ8IYS5 282 aa27.19■■□□□ 1.94
YIF1A-204ENST00000431556 MAGI1Q96QZ7 1491 aaPredicted RBP27.13■■□□□ 1.93
YIF1A-204ENST00000431556 FBLN2P98095 1184 aa27.1■■□□□ 1.93
YIF1A-204ENST00000431556 SYNJ2O15056 1496 aa27.03■■□□□ 1.92
YIF1A-204ENST00000431556 CHMP7Q8WUX9 453 aaPredicted RBP27■■□□□ 1.91
YIF1A-204ENST00000431556 ADAMTS12P58397 1594 aa26.99■■□□□ 1.91
YIF1A-204ENST00000431556 ERICH3Q5RHP9 1530 aa26.97■■□□□ 1.91
YIF1A-204ENST00000431556 FHAD1B1AJZ9 1412 aa26.89■■□□□ 1.89
YIF1A-204ENST00000431556 KIF27Q86VH2 1401 aa26.89■■□□□ 1.89
YIF1A-204ENST00000431556 CLASP1Q7Z460 1538 aa26.88■■□□□ 1.89
YIF1A-204ENST00000431556 GRIN2AQ12879 1464 aa26.87■■□□□ 1.89
YIF1A-204ENST00000431556 RIMBP3CA6NJZ7 1639 aa26.85■■□□□ 1.89
YIF1A-204ENST00000431556 RIMBP3BA6NNM3 1639 aa26.85■■□□□ 1.89
YIF1A-204ENST00000431556 RIMBP3Q9UFD9 1639 aa26.85■■□□□ 1.89
YIF1A-204ENST00000431556 ARHGEF11O15085 1522 aa26.83■■□□□ 1.89
YIF1A-204ENST00000431556 IGF1RP08069 1367 aa26.79■■□□□ 1.88
YIF1A-204ENST00000431556 CEP170Q5SW79 1584 aa26.78■■□□□ 1.88
YIF1A-204ENST00000431556 TRIM41Q8WV44 630 aa26.77■■□□□ 1.88
YIF1A-204ENST00000431556 NUP160Q12769 1436 aa26.75■■□□□ 1.87
YIF1A-204ENST00000431556 CUL7Q14999 1698 aa26.74■■□□□ 1.87
YIF1A-204ENST00000431556 RUSC2Q8N2Y8 1516 aa26.71■■□□□ 1.87
YIF1A-204ENST00000431556 ARAP1Q96P48 1450 aa26.63■■□□□ 1.85
YIF1A-204ENST00000431556 CARMIL1Q5VZK9 1371 aa26.63■■□□□ 1.85
YIF1A-204ENST00000431556 SHROOM2Q13796 1616 aa26.57■■□□□ 1.84
YIF1A-204ENST00000431556 ERCC6L2Q5T890 1561 aa26.55■■□□□ 1.84
YIF1A-204ENST00000431556 CYB5RLQ6IPT4 315 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms