RNA–Protein interactions for RNA: ENST00000510363.1

NHP2-204, Transcript of NHP2 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NHP2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHP2-204ENST00000510363 NISCHQ9Y2I1 1504 aa39.48■■■■□ 3.91
NHP2-204ENST00000510363 ABCC9O60706 1549 aa35.32■■■■□ 3.24
NHP2-204ENST00000510363 CCDC180Q9P1Z9 1646 aa35.29■■■■□ 3.24
NHP2-204ENST00000510363 RB1CC1Q8TDY2 1594 aa33.63■■■□□ 2.97
NHP2-204ENST00000510363 DCAF8L2P0C7V8 631 aa33.46■■■□□ 2.95
NHP2-204ENST00000510363 NACADO15069 1562 aa33.43■■■□□ 2.94
NHP2-204ENST00000510363 DNAJC5BQ9UF47 199 aa33.05■■■□□ 2.88
NHP2-204ENST00000510363 MYO15BQ96JP2 1530 aa32.99■■■□□ 2.87
NHP2-204ENST00000510363 PABPN1Q86U42 306 aaKnown RBP eCLIP32.96■■■□□ 2.87
NHP2-204ENST00000510363 ZCCHC6Q5VYS8 1495 aaKnown RBP32.71■■■□□ 2.83
NHP2-204ENST00000510363 UNC13AQ9UPW8 1703 aa32.7■■■□□ 2.83
NHP2-204ENST00000510363 DCAF1Q9Y4B6 1507 aa32.6■■■□□ 2.81
NHP2-204ENST00000510363 BICRAQ9NZM4 1560 aa32.58■■■□□ 2.81
NHP2-204ENST00000510363 SCRIBQ14160 1630 aa32.22■■■□□ 2.75
NHP2-204ENST00000510363 SHROOM4Q9ULL8 1493 aa32.22■■■□□ 2.75
NHP2-204ENST00000510363 CC2D2AQ9P2K1 1620 aa31.85■■■□□ 2.69
NHP2-204ENST00000510363 EIF4G1Q04637 1599 aaKnown RBP31.81■■■□□ 2.68
NHP2-204ENST00000510363 CECR2Q9BXF3 1484 aa31.81■■■□□ 2.68
NHP2-204ENST00000510363 NCAPD3P42695 1498 aa30.89■■■□□ 2.53
NHP2-204ENST00000510363 ATAD2BQ9ULI0 1458 aa30.8■■■□□ 2.52
NHP2-204ENST00000510363 SMARCA4P51532 1647 aa30.73■■■□□ 2.51
NHP2-204ENST00000510363 SMARCA2P51531 1590 aa30.71■■■□□ 2.51
NHP2-204ENST00000510363 BAZ1AQ9NRL2 1556 aaPredicted RBP30.65■■■□□ 2.5
NHP2-204ENST00000510363 HMGXB3Q12766 1538 aa30.61■■■□□ 2.49
NHP2-204ENST00000510363 ERCC6Q03468 1493 aa30.53■■■□□ 2.48
NHP2-204ENST00000510363 BAZ1BQ9UIG0 1483 aaKnown RBP30.52■■■□□ 2.48
NHP2-204ENST00000510363 PEG3Q9GZU2 1588 aa30.43■■■□□ 2.46
NHP2-204ENST00000510363 MROH2BQ7Z745 1585 aa30.41■■■□□ 2.46
NHP2-204ENST00000510363 CUX2O14529 1486 aa30.39■■■□□ 2.46
NHP2-204ENST00000510363 NESP48681 1621 aa30.33■■■□□ 2.45
NHP2-204ENST00000510363 DNAJC5Q9H3Z4 198 aa30.33■■■□□ 2.45
NHP2-204ENST00000510363 LAMC3Q9Y6N6 1575 aa30.14■■■□□ 2.42
NHP2-204ENST00000510363 PDS5BQ9NTI5 1447 aa30.05■■■□□ 2.4
NHP2-204ENST00000510363 WIZO95785 1651 aa30.01■■■□□ 2.39
NHP2-204ENST00000510363 CADPSQ9ULU8 1353 aa29.99■■■□□ 2.39
NHP2-204ENST00000510363 THOC2Q8NI27 1593 aaKnown RBP29.94■■■□□ 2.38
NHP2-204ENST00000510363 RSF1Q96T23 1441 aaPredicted RBP29.86■■■□□ 2.37
NHP2-204ENST00000510363 KIF21AQ7Z4S6 1674 aa29.85■■■□□ 2.37
NHP2-204ENST00000510363 MRC2Q9UBG0 1479 aa29.73■■■□□ 2.35
NHP2-204ENST00000510363 TOP2AP11388 1531 aaKnown RBP29.67■■■□□ 2.34
NHP2-204ENST00000510363 CEP164Q9UPV0 1460 aa29.64■■■□□ 2.34
NHP2-204ENST00000510363 CFTRP13569 1480 aa29.63■■■□□ 2.33
NHP2-204ENST00000510363 FANCD2Q9BXW9 1451 aa29.61■■■□□ 2.33
NHP2-204ENST00000510363 WDR62O43379 1518 aa29.61■■■□□ 2.33
NHP2-204ENST00000510363 CCDC88BA6NC98 1476 aa29.38■■■□□ 2.29
NHP2-204ENST00000510363 URB2Q14146 1524 aaKnown RBP29.33■■■□□ 2.29
NHP2-204ENST00000510363 PRDM2Q13029 1718 aa29.17■■■□□ 2.26
NHP2-204ENST00000510363 OSCARQ8IYS5 282 aa29.13■■■□□ 2.25
NHP2-204ENST00000510363 TRIM41Q8WV44 630 aa29.08■■■□□ 2.25
NHP2-204ENST00000510363 IFT140Q96RY7 1462 aa29.05■■■□□ 2.24
NHP2-204ENST00000510363 ABCC8Q09428 1581 aa29.04■■■□□ 2.24
NHP2-204ENST00000510363 TOPBP1Q92547 1522 aa29.04■■■□□ 2.24
NHP2-204ENST00000510363 ZNF608Q9ULD9 1512 aaPredicted RBP28.96■■■□□ 2.23
NHP2-204ENST00000510363 DNMBPQ6XZF7 1577 aa28.92■■■□□ 2.22
NHP2-204ENST00000510363 EIF4G3O43432 1585 aaKnown RBP28.75■■■□□ 2.19
NHP2-204ENST00000510363 AQRO60306 1485 aaKnown RBP eCLIP28.75■■■□□ 2.197e-6■■□□□ 13.1
NHP2-204ENST00000510363 POLA1P09884 1462 aaPredicted RBP28.75■■■□□ 2.19
NHP2-204ENST00000510363 TARBP1Q13395 1621 aaKnown RBP28.72■■■□□ 2.19
NHP2-204ENST00000510363 SUPT5HO00267 1087 aaKnown RBP28.72■■■□□ 2.19
NHP2-204ENST00000510363 SOGA1O94964 1423 aa28.69■■■□□ 2.18
NHP2-204ENST00000510363 RAD54L2Q9Y4B4 1467 aa28.66■■■□□ 2.18
NHP2-204ENST00000510363 FBLN2P98095 1184 aa28.65■■■□□ 2.18
NHP2-204ENST00000510363 TDRD9Q8NDG6 1382 aaKnown RBP28.62■■■□□ 2.17
NHP2-204ENST00000510363 FGD5Q6ZNL6 1462 aa28.59■■■□□ 2.17
NHP2-204ENST00000510363 RIMBP3CA6NJZ7 1639 aa28.58■■■□□ 2.17
NHP2-204ENST00000510363 RIMBP3BA6NNM3 1639 aa28.58■■■□□ 2.17
NHP2-204ENST00000510363 RIMBP3Q9UFD9 1639 aa28.58■■■□□ 2.17
NHP2-204ENST00000510363 CUX1P39880 1505 aa28.56■■■□□ 2.16
NHP2-204ENST00000510363 ARHGEF11O15085 1522 aa28.53■■■□□ 2.16
NHP2-204ENST00000510363 CHD1O14646 1710 aa28.48■■■□□ 2.15
NHP2-204ENST00000510363 WDR97A6NE52 1622 aa28.47■■■□□ 2.15
NHP2-204ENST00000510363 CYB5RLQ6IPT4 315 aa28.44■■■□□ 2.14
NHP2-204ENST00000510363 CHMP7Q8WUX9 453 aaPredicted RBP28.44■■■□□ 2.14
NHP2-204ENST00000510363 SNAPC4Q5SXM2 1469 aa28.44■■■□□ 2.14
NHP2-204ENST00000510363 GRIN2BQ13224 1484 aa28.4■■■□□ 2.14
NHP2-204ENST00000510363 MAGI1Q96QZ7 1491 aaPredicted RBP28.38■■■□□ 2.13
NHP2-204ENST00000510363 GAPVD1Q14C86 1478 aa28.32■■■□□ 2.12
NHP2-204ENST00000510363 SYNJ2O15056 1496 aa28.28■■■□□ 2.12
NHP2-204ENST00000510363 ABCA10Q8WWZ4 1543 aa28.28■■■□□ 2.12
NHP2-204ENST00000510363 ARAP1Q96P48 1450 aa28.26■■■□□ 2.11
NHP2-204ENST00000510363 SYNJ1O43426 1573 aa28.25■■■□□ 2.11
NHP2-204ENST00000510363 WRNQ14191 1432 aaPredicted RBP eCLIP28.25■■■□□ 2.11
NHP2-204ENST00000510363 CLASP1Q7Z460 1538 aa28.21■■■□□ 2.11
NHP2-204ENST00000510363 PBRM1Q86U86 1689 aa28.16■■■□□ 2.1
NHP2-204ENST00000510363 ABCA5Q8WWZ7 1642 aa28.16■■■□□ 2.1
NHP2-204ENST00000510363 TRHP20396 242 aaPredicted RBP28.13■■■□□ 2.09
NHP2-204ENST00000510363 TOP2BQ02880 1626 aa28.12■■■□□ 2.09
NHP2-204ENST00000510363 BIVM-ERCC5R4GMW8 1640 aa28.08■■■□□ 2.09
NHP2-204ENST00000510363 GRIN2AQ12879 1464 aa28.01■■■□□ 2.07
NHP2-204ENST00000510363 FHAD1B1AJZ9 1412 aa27.98■■■□□ 2.07
NHP2-204ENST00000510363 ADAMTS12P58397 1594 aa27.95■■■□□ 2.07
NHP2-204ENST00000510363 ERICH3Q5RHP9 1530 aa27.92■■■□□ 2.06
NHP2-204ENST00000510363 NUP160Q12769 1436 aa27.91■■■□□ 2.06
NHP2-204ENST00000510363 CEP170Q5SW79 1584 aa27.86■■■□□ 2.05
NHP2-204ENST00000510363 ERCC6L2Q5T890 1561 aa27.77■■■□□ 2.04
NHP2-204ENST00000510363 JPH4Q96JJ6 628 aa27.73■■■□□ 2.03
NHP2-204ENST00000510363 SHROOM2Q13796 1616 aa27.7■■■□□ 2.02
NHP2-204ENST00000510363 PRG4Q92954 1404 aaPredicted RBP27.68■■■□□ 2.02
NHP2-204ENST00000510363 KIF27Q86VH2 1401 aa27.67■■■□□ 2.02
NHP2-204ENST00000510363 IGF1RP08069 1367 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms