RNA–Protein interactions for RNA: ENST00000470434.1

SBF1-205, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 2,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-205ENST00000470434 NISCHQ9Y2I1 1504 aa40.57■■■■■ 4.08
SBF1-205ENST00000470434 CCDC180Q9P1Z9 1646 aa35.76■■■■□ 3.32
SBF1-205ENST00000470434 ABCC9O60706 1549 aa34.29■■■■□ 3.08
SBF1-205ENST00000470434 ZCCHC6Q5VYS8 1495 aaKnown RBP33.95■■■■□ 3.03
SBF1-205ENST00000470434 DCAF1Q9Y4B6 1507 aa33.62■■■□□ 2.97
SBF1-205ENST00000470434 DCAF8L2P0C7V8 631 aa33.6■■■□□ 2.97
SBF1-205ENST00000470434 MYO15BQ96JP2 1530 aa33.51■■■□□ 2.95
SBF1-205ENST00000470434 NACADO15069 1562 aa33.47■■■□□ 2.95
SBF1-205ENST00000470434 RB1CC1Q8TDY2 1594 aa33.32■■■□□ 2.93
SBF1-205ENST00000470434 SHROOM4Q9ULL8 1493 aa33.12■■■□□ 2.89
SBF1-205ENST00000470434 SCRIBQ14160 1630 aa32.67■■■□□ 2.82
SBF1-205ENST00000470434 SUPT5HO00267 1087 aaKnown RBP32.59■■■□□ 2.81
SBF1-205ENST00000470434 UNC13AQ9UPW8 1703 aa32.53■■■□□ 2.8
SBF1-205ENST00000470434 BICRAQ9NZM4 1560 aa32.26■■■□□ 2.75
SBF1-205ENST00000470434 PABPN1Q86U42 306 aaKnown RBP eCLIP32.15■■■□□ 2.749e-7■■■□□ 16.3
SBF1-205ENST00000470434 CHIC1Q5VXU3 224 aa31.89■■■□□ 2.7
SBF1-205ENST00000470434 CECR2Q9BXF3 1484 aa31.5■■■□□ 2.63
SBF1-205ENST00000470434 BAZ1AQ9NRL2 1556 aaPredicted RBP31.41■■■□□ 2.62
SBF1-205ENST00000470434 EIF4G1Q04637 1599 aaKnown RBP31.37■■■□□ 2.61
SBF1-205ENST00000470434 HRCP23327 699 aa31.33■■■□□ 2.61
SBF1-205ENST00000470434 SMARCA4P51532 1647 aa31.33■■■□□ 2.61
SBF1-205ENST00000470434 MROH2BQ7Z745 1585 aa31.26■■■□□ 2.59
SBF1-205ENST00000470434 RSF1Q96T23 1441 aaPredicted RBP31.17■■■□□ 2.58
SBF1-205ENST00000470434 PCGF6Q9BYE7 350 aa31.07■■■□□ 2.56
SBF1-205ENST00000470434 CC2D2AQ9P2K1 1620 aa31.06■■■□□ 2.56
SBF1-205ENST00000470434 PEG3Q9GZU2 1588 aa31.02■■■□□ 2.56
SBF1-205ENST00000470434 SMARCA2P51531 1590 aa31■■■□□ 2.55
SBF1-205ENST00000470434 ATAD2BQ9ULI0 1458 aa30.98■■■□□ 2.55
SBF1-205ENST00000470434 WIZO95785 1651 aa30.96■■■□□ 2.55
SBF1-205ENST00000470434 LOC105371045A0A1W2PR82 267 aa30.88■■■□□ 2.53
SBF1-205ENST00000470434 NCAPD3P42695 1498 aa30.86■■■□□ 2.53
SBF1-205ENST00000470434 DNAJC5BQ9UF47 199 aa30.8■■■□□ 2.52
SBF1-205ENST00000470434 HMGXB3Q12766 1538 aa30.78■■■□□ 2.52
SBF1-205ENST00000470434 BAZ1BQ9UIG0 1483 aaKnown RBP30.78■■■□□ 2.52
SBF1-205ENST00000470434 TOP2AP11388 1531 aaKnown RBP30.7■■■□□ 2.5
SBF1-205ENST00000470434 TRIM26Q12899 539 aaPredicted RBP30.52■■■□□ 2.48
SBF1-205ENST00000470434 PPARGC1BQ86YN6 1023 aaKnown RBP30.52■■■□□ 2.48
SBF1-205ENST00000470434 TRIM41Q8WV44 630 aa30.4■■■□□ 2.46
SBF1-205ENST00000470434 CCDC88BA6NC98 1476 aa30.32■■■□□ 2.44
SBF1-205ENST00000470434 FAM9AQ8IZU1 332 aaPredicted RBP30.06■■■□□ 2.4
SBF1-205ENST00000470434 CADPSQ9ULU8 1353 aa30■■■□□ 2.39
SBF1-205ENST00000470434 ZEB1P37275 1124 aaPredicted RBP30■■■□□ 2.39
SBF1-205ENST00000470434 CFTRP13569 1480 aa29.97■■■□□ 2.39
SBF1-205ENST00000470434 LAMC3Q9Y6N6 1575 aa29.94■■■□□ 2.38
SBF1-205ENST00000470434 NESP48681 1621 aa29.87■■■□□ 2.37
SBF1-205ENST00000470434 PRDM2Q13029 1718 aa29.8■■■□□ 2.36
SBF1-205ENST00000470434 PDS5BQ9NTI5 1447 aa29.72■■■□□ 2.35
SBF1-205ENST00000470434 EHMT2Q96KQ7 1210 aa29.72■■■□□ 2.35
SBF1-205ENST00000470434 FANCD2Q9BXW9 1451 aa29.66■■■□□ 2.34
SBF1-205ENST00000470434 CEP164Q9UPV0 1460 aa29.56■■■□□ 2.32
SBF1-205ENST00000470434 KIF21AQ7Z4S6 1674 aa29.54■■■□□ 2.32
SBF1-205ENST00000470434 ERCC6Q03468 1493 aa29.53■■■□□ 2.32
SBF1-205ENST00000470434 ABCC8Q09428 1581 aa29.47■■■□□ 2.31
SBF1-205ENST00000470434 WRNQ14191 1432 aaPredicted RBP eCLIP29.39■■■□□ 2.3
SBF1-205ENST00000470434 MRC2Q9UBG0 1479 aa29.37■■■□□ 2.29
SBF1-205ENST00000470434 URB2Q14146 1524 aaKnown RBP29.3■■■□□ 2.28
SBF1-205ENST00000470434 CUX1P39880 1505 aa29.29■■■□□ 2.28
SBF1-205ENST00000470434 DNMBPQ6XZF7 1577 aa29.29■■■□□ 2.28
SBF1-205ENST00000470434 THOC2Q8NI27 1593 aaKnown RBP29.28■■■□□ 2.28
SBF1-205ENST00000470434 TOPBP1Q92547 1522 aa29.26■■■□□ 2.27
SBF1-205ENST00000470434 SYNJ1O43426 1573 aa29.25■■■□□ 2.27
SBF1-205ENST00000470434 WDR62O43379 1518 aa29.24■■■□□ 2.27
SBF1-205ENST00000470434 TOP2BQ02880 1626 aa29.24■■■□□ 2.27
SBF1-205ENST00000470434 BIVM-ERCC5R4GMW8 1640 aa29.23■■■□□ 2.27
SBF1-205ENST00000470434 CEP162Q5TB80 1403 aa29.22■■■□□ 2.27
SBF1-205ENST00000470434 EEA1Q15075 1411 aa29.21■■■□□ 2.27
SBF1-205ENST00000470434 SOGA1O94964 1423 aa29.2■■■□□ 2.26
SBF1-205ENST00000470434 TNIKQ9UKE5 1360 aa29.18■■■□□ 2.26
SBF1-205ENST00000470434 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.17■■■□□ 2.26
SBF1-205ENST00000470434 CCER1Q8TC90 406 aaPredicted RBP29.13■■■□□ 2.25
SBF1-205ENST00000470434 FGD5Q6ZNL6 1462 aa29.09■■■□□ 2.25
SBF1-205ENST00000470434 POLA1P09884 1462 aaPredicted RBP29.05■■■□□ 2.24
SBF1-205ENST00000470434 CSRNP3Q8WYN3 585 aa29.05■■■□□ 2.24
SBF1-205ENST00000470434 RUSC2Q8N2Y8 1516 aa29.05■■■□□ 2.24
SBF1-205ENST00000470434 GOLGA3Q08378 1498 aa28.99■■■□□ 2.23
SBF1-205ENST00000470434 CUX2O14529 1486 aa28.96■■■□□ 2.23
SBF1-205ENST00000470434 SCAF1Q9H7N4 1312 aaKnown RBP28.95■■■□□ 2.23
SBF1-205ENST00000470434 IFT140Q96RY7 1462 aa28.91■■■□□ 2.22
SBF1-205ENST00000470434 RAD54L2Q9Y4B4 1467 aa28.9■■■□□ 2.22
SBF1-205ENST00000470434 UBTFP17480 764 aaKnown RBP28.9■■■□□ 2.22
SBF1-205ENST00000470434 TARBP1Q13395 1621 aaKnown RBP28.87■■■□□ 2.21
SBF1-205ENST00000470434 TTBK1Q5TCY1 1321 aaPredicted RBP28.86■■■□□ 2.21
SBF1-205ENST00000470434 ABCA10Q8WWZ4 1543 aa28.85■■■□□ 2.21
SBF1-205ENST00000470434 KIF21BO75037 1637 aa28.85■■■□□ 2.21
SBF1-205ENST00000470434 WDR97A6NE52 1622 aa28.8■■■□□ 2.2
SBF1-205ENST00000470434 KIF27Q86VH2 1401 aa28.73■■■□□ 2.19
SBF1-205ENST00000470434 PELP1Q8IZL8 1130 aaKnown RBP28.72■■■□□ 2.19
SBF1-205ENST00000470434 DIEXFQ68CQ4 756 aaKnown RBP28.71■■■□□ 2.19
SBF1-205ENST00000470434 TDRD9Q8NDG6 1382 aaKnown RBP28.69■■■□□ 2.18
SBF1-205ENST00000470434 ZNF608Q9ULD9 1512 aaPredicted RBP28.68■■■□□ 2.18
SBF1-205ENST00000470434 ABCA5Q8WWZ7 1642 aa28.67■■■□□ 2.18
SBF1-205ENST00000470434 ACIN1Q9UKV3 1341 aaKnown RBP28.65■■■□□ 2.18
SBF1-205ENST00000470434 GAPVD1Q14C86 1478 aa28.64■■■□□ 2.18
SBF1-205ENST00000470434 AQRO60306 1485 aaKnown RBP eCLIP28.62■■■□□ 2.17
SBF1-205ENST00000470434 CLIP1P30622 1438 aa28.62■■■□□ 2.17
SBF1-205ENST00000470434 EIF4G3O43432 1585 aaKnown RBP28.62■■■□□ 2.17
SBF1-205ENST00000470434 VPS8Q8N3P4 1428 aa28.56■■■□□ 2.16
SBF1-205ENST00000470434 NEUROD1Q13562 356 aa28.55■■■□□ 2.16
SBF1-205ENST00000470434 GRIN2BQ13224 1484 aa28.54■■■□□ 2.16
SBF1-205ENST00000470434 ERICH3Q5RHP9 1530 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 181.2 ms