RNA–Protein interactions for RNA: ENST00000592222.5

SBNO2-210, Transcript of strawberry notch homolog 2, humanhuman

TSL 1 (best)

Gene SBNO2, Length 2,403 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO2-210ENST00000592222 NISCHQ9Y2I1 1504 aa38.03■■■■□ 3.68
SBNO2-210ENST00000592222 CCDC180Q9P1Z9 1646 aa32.61■■■□□ 2.81
SBNO2-210ENST00000592222 ZCCHC6Q5VYS8 1495 aaKnown RBP32.08■■■□□ 2.73
SBNO2-210ENST00000592222 SHROOM4Q9ULL8 1493 aa31.99■■■□□ 2.71
SBNO2-210ENST00000592222 DCAF8L2P0C7V8 631 aa31.55■■■□□ 2.64
SBNO2-210ENST00000592222 SUPT5HO00267 1087 aaKnown RBP31.32■■■□□ 2.6
SBNO2-210ENST00000592222 DCAF1Q9Y4B6 1507 aa31.22■■■□□ 2.59
SBNO2-210ENST00000592222 HRCP23327 699 aa31.21■■■□□ 2.59
SBNO2-210ENST00000592222 MYO15BQ96JP2 1530 aa30.96■■■□□ 2.55
SBNO2-210ENST00000592222 CHIC1Q5VXU3 224 aa30.82■■■□□ 2.52
SBNO2-210ENST00000592222 PCGF6Q9BYE7 350 aa30.67■■■□□ 2.5
SBNO2-210ENST00000592222 ABCC9O60706 1549 aa30.55■■■□□ 2.48
SBNO2-210ENST00000592222 PPARGC1BQ86YN6 1023 aaKnown RBP30.47■■■□□ 2.47
SBNO2-210ENST00000592222 SCRIBQ14160 1630 aa30.44■■■□□ 2.46
SBNO2-210ENST00000592222 NACADO15069 1562 aa30.22■■■□□ 2.43
SBNO2-210ENST00000592222 LOC105371045A0A1W2PR82 267 aa29.97■■■□□ 2.39
SBNO2-210ENST00000592222 RSF1Q96T23 1441 aaPredicted RBP29.89■■■□□ 2.37
SBNO2-210ENST00000592222 TRIM26Q12899 539 aaPredicted RBP29.88■■■□□ 2.37
SBNO2-210ENST00000592222 RB1CC1Q8TDY2 1594 aa29.83■■■□□ 2.37
SBNO2-210ENST00000592222 CECR2Q9BXF3 1484 aa29.7■■■□□ 2.35
SBNO2-210ENST00000592222 PELP1Q8IZL8 1130 aaKnown RBP29.57■■■□□ 2.32
SBNO2-210ENST00000592222 MROH2BQ7Z745 1585 aa29.56■■■□□ 2.32
SBNO2-210ENST00000592222 ZEB1P37275 1124 aaPredicted RBP29.55■■■□□ 2.32
SBNO2-210ENST00000592222 UNC13AQ9UPW8 1703 aa29.5■■■□□ 2.31
SBNO2-210ENST00000592222 WIZO95785 1651 aa29.4■■■□□ 2.3
SBNO2-210ENST00000592222 SCAF1Q9H7N4 1312 aaKnown RBP29.27■■■□□ 2.28
SBNO2-210ENST00000592222 BAZ1AQ9NRL2 1556 aaPredicted RBP29.23■■■□□ 2.27
SBNO2-210ENST00000592222 BICRAQ9NZM4 1560 aa29.1■■■□□ 2.25
SBNO2-210ENST00000592222 PABPN1Q86U42 306 aaKnown RBP eCLIP29.09■■■□□ 2.25
SBNO2-210ENST00000592222 SMARCA4P51532 1647 aa29.09■■■□□ 2.25
SBNO2-210ENST00000592222 TRIM41Q8WV44 630 aa29.08■■■□□ 2.25
SBNO2-210ENST00000592222 FAM9AQ8IZU1 332 aaPredicted RBP28.92■■■□□ 2.22
SBNO2-210ENST00000592222 TOP2AP11388 1531 aaKnown RBP28.89■■■□□ 2.22
SBNO2-210ENST00000592222 EIF4G1Q04637 1599 aaKnown RBP28.81■■■□□ 2.2
SBNO2-210ENST00000592222 CCDC88BA6NC98 1476 aa28.76■■■□□ 2.19
SBNO2-210ENST00000592222 SMARCA2P51531 1590 aa28.74■■■□□ 2.19
SBNO2-210ENST00000592222 ACIN1Q9UKV3 1341 aaKnown RBP28.71■■■□□ 2.19
SBNO2-210ENST00000592222 EHMT2Q96KQ7 1210 aa28.69■■■□□ 2.18
SBNO2-210ENST00000592222 NEUROD1Q13562 356 aa28.61■■■□□ 2.17
SBNO2-210ENST00000592222 PEG3Q9GZU2 1588 aa28.56■■■□□ 2.16
SBNO2-210ENST00000592222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.55■■■□□ 2.16
SBNO2-210ENST00000592222 ABCC8Q09428 1581 aa28.53■■■□□ 2.16
SBNO2-210ENST00000592222 CCER1Q8TC90 406 aaPredicted RBP28.51■■■□□ 2.15
SBNO2-210ENST00000592222 ATAD2BQ9ULI0 1458 aa28.43■■■□□ 2.14
SBNO2-210ENST00000592222 GTF3C3Q9Y5Q9 886 aa28.4■■■□□ 2.14
SBNO2-210ENST00000592222 DIEXFQ68CQ4 756 aaKnown RBP28.4■■■□□ 2.14
SBNO2-210ENST00000592222 CENPBP07199 599 aaPredicted RBP28.39■■■□□ 2.13
SBNO2-210ENST00000592222 MYT1Q01538 1121 aa28.32■■■□□ 2.12
SBNO2-210ENST00000592222 BAZ1BQ9UIG0 1483 aaKnown RBP28.3■■■□□ 2.12
SBNO2-210ENST00000592222 SOGA1O94964 1423 aa28.14■■■□□ 2.1
SBNO2-210ENST00000592222 WRNQ14191 1432 aaPredicted RBP eCLIP28.14■■■□□ 2.1
SBNO2-210ENST00000592222 RUSC2Q8N2Y8 1516 aa28.06■■■□□ 2.08
SBNO2-210ENST00000592222 SYNJ1O43426 1573 aa28.01■■■□□ 2.08
SBNO2-210ENST00000592222 ZNF316A6NFI3 1004 aaPredicted RBP27.98■■■□□ 2.07
SBNO2-210ENST00000592222 TTBK1Q5TCY1 1321 aaPredicted RBP27.97■■■□□ 2.07
SBNO2-210ENST00000592222 CEP162Q5TB80 1403 aa27.97■■■□□ 2.07
SBNO2-210ENST00000592222 NCAPD3P42695 1498 aa27.96■■■□□ 2.07
SBNO2-210ENST00000592222 HMGXB3Q12766 1538 aa27.93■■■□□ 2.06
SBNO2-210ENST00000592222 CSRNP3Q8WYN3 585 aa27.89■■■□□ 2.05
SBNO2-210ENST00000592222 EEA1Q15075 1411 aa27.86■■■□□ 2.05
SBNO2-210ENST00000592222 TNIKQ9UKE5 1360 aa27.84■■■□□ 2.05
SBNO2-210ENST00000592222 YTHDC1Q96MU7 727 aaKnown RBP27.79■■■□□ 2.04
SBNO2-210ENST00000592222 TOP2BQ02880 1626 aa27.7■■■□□ 2.03
SBNO2-210ENST00000592222 UBTFP17480 764 aaKnown RBP27.7■■■□□ 2.02
SBNO2-210ENST00000592222 MIER1Q8N108 512 aa27.7■■■□□ 2.02
SBNO2-210ENST00000592222 GOLGA3Q08378 1498 aa27.67■■■□□ 2.02
SBNO2-210ENST00000592222 BIVM-ERCC5R4GMW8 1640 aa27.63■■■□□ 2.01
SBNO2-210ENST00000592222 CFTRP13569 1480 aa27.6■■■□□ 2.01
SBNO2-210ENST00000592222 KIF21BO75037 1637 aa27.58■■■□□ 2.01
SBNO2-210ENST00000592222 CEP164Q9UPV0 1460 aa27.56■■■□□ 2
SBNO2-210ENST00000592222 CC2D2AQ9P2K1 1620 aa27.56■■■□□ 2
SBNO2-210ENST00000592222 CUX1P39880 1505 aa27.54■■■□□ 2
SBNO2-210ENST00000592222 RAPGEF2Q9Y4G8 1499 aa27.48■■□□□ 1.99
SBNO2-210ENST00000592222 HNRNPUL2Q1KMD3 747 aaKnown RBP27.47■■□□□ 1.99
SBNO2-210ENST00000592222 PRDM2Q13029 1718 aa27.44■■□□□ 1.98
SBNO2-210ENST00000592222 CADPSQ9ULU8 1353 aa27.37■■□□□ 1.97
SBNO2-210ENST00000592222 CLIP1P30622 1438 aa27.33■■□□□ 1.97
SBNO2-210ENST00000592222 RANGAP1P46060 587 aaPredicted RBP27.29■■□□□ 1.96
SBNO2-210ENST00000592222 PRXQ9BXM0 1461 aa27.27■■□□□ 1.96
SBNO2-210ENST00000592222 VPS8Q8N3P4 1428 aa27.25■■□□□ 1.95
SBNO2-210ENST00000592222 CLSPNQ9HAW4 1339 aa27.24■■□□□ 1.95
SBNO2-210ENST00000592222 KIF27Q86VH2 1401 aa27.22■■□□□ 1.95
SBNO2-210ENST00000592222 ERICH3Q5RHP9 1530 aa27.21■■□□□ 1.95
SBNO2-210ENST00000592222 SUPT16HQ9Y5B9 1047 aaKnown RBP27.17■■□□□ 1.94
SBNO2-210ENST00000592222 APLP2Q06481 763 aa27.13■■□□□ 1.93
SBNO2-210ENST00000592222 NESP48681 1621 aa27.12■■□□□ 1.93
SBNO2-210ENST00000592222 FGD5Q6ZNL6 1462 aa27.11■■□□□ 1.93
SBNO2-210ENST00000592222 FANCD2Q9BXW9 1451 aa27.11■■□□□ 1.93
SBNO2-210ENST00000592222 CUX2O14529 1486 aa27.09■■□□□ 1.93
SBNO2-210ENST00000592222 DHX57Q6P158 1386 aaKnown RBP27.05■■□□□ 1.92
SBNO2-210ENST00000592222 DNAJC5BQ9UF47 199 aa27.01■■□□□ 1.91
SBNO2-210ENST00000592222 ARAP1Q96P48 1450 aa27.01■■□□□ 1.91
SBNO2-210ENST00000592222 IGF1RP08069 1367 aa27■■□□□ 1.91
SBNO2-210ENST00000592222 TSHZ2Q9NRE2 1034 aa26.95■■□□□ 1.9
SBNO2-210ENST00000592222 DNMBPQ6XZF7 1577 aa26.93■■□□□ 1.9
SBNO2-210ENST00000592222 TOPBP1Q92547 1522 aa26.9■■□□□ 1.9
SBNO2-210ENST00000592222 RAD54L2Q9Y4B4 1467 aa26.9■■□□□ 1.9
SBNO2-210ENST00000592222 POLA1P09884 1462 aaPredicted RBP26.86■■□□□ 1.89
SBNO2-210ENST00000592222 CARMIL1Q5VZK9 1371 aa26.86■■□□□ 1.89
SBNO2-210ENST00000592222 LAMC3Q9Y6N6 1575 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms