RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 NISCHQ9Y2I1 1504 aa35.59■■■■□ 3.29
ABCF3-209ENST00000472608 ABCC9O60706 1549 aa32.73■■■□□ 2.83
ABCF3-209ENST00000472608 CCDC180Q9P1Z9 1646 aa32.16■■■□□ 2.74
ABCF3-209ENST00000472608 DNAJC5BQ9UF47 199 aa31.36■■■□□ 2.61
ABCF3-209ENST00000472608 RB1CC1Q8TDY2 1594 aa30.92■■■□□ 2.54
ABCF3-209ENST00000472608 NACADO15069 1562 aa30.6■■■□□ 2.49
ABCF3-209ENST00000472608 PABPN1Q86U42 306 aaKnown RBP eCLIP30.39■■■□□ 2.46
ABCF3-209ENST00000472608 DCAF8L2P0C7V8 631 aa30.17■■■□□ 2.42
ABCF3-209ENST00000472608 UNC13AQ9UPW8 1703 aa30.15■■■□□ 2.42
ABCF3-209ENST00000472608 BICRAQ9NZM4 1560 aa30.08■■■□□ 2.41
ABCF3-209ENST00000472608 MYO15BQ96JP2 1530 aa30.06■■■□□ 2.4
ABCF3-209ENST00000472608 SHROOM4Q9ULL8 1493 aa29.68■■■□□ 2.34
ABCF3-209ENST00000472608 CECR2Q9BXF3 1484 aa29.59■■■□□ 2.33
ABCF3-209ENST00000472608 CC2D2AQ9P2K1 1620 aa29.56■■■□□ 2.32
ABCF3-209ENST00000472608 DCAF1Q9Y4B6 1507 aa29.42■■■□□ 2.3
ABCF3-209ENST00000472608 EIF4G1Q04637 1599 aaKnown RBP29.36■■■□□ 2.29
ABCF3-209ENST00000472608 ZCCHC6Q5VYS8 1495 aaKnown RBP29.36■■■□□ 2.29
ABCF3-209ENST00000472608 DNAJC5Q9H3Z4 198 aa29.28■■■□□ 2.28
ABCF3-209ENST00000472608 SCRIBQ14160 1630 aa29.19■■■□□ 2.26
ABCF3-209ENST00000472608 CUX2O14529 1486 aa28.54■■■□□ 2.16
ABCF3-209ENST00000472608 NCAPD3P42695 1498 aa28.31■■■□□ 2.12
ABCF3-209ENST00000472608 ERCC6Q03468 1493 aa28.28■■■□□ 2.12
ABCF3-209ENST00000472608 ATAD2BQ9ULI0 1458 aa28.08■■■□□ 2.09
ABCF3-209ENST00000472608 HMGXB3Q12766 1538 aa27.98■■■□□ 2.07
ABCF3-209ENST00000472608 NESP48681 1621 aa27.96■■■□□ 2.07
ABCF3-209ENST00000472608 SMARCA2P51531 1590 aa27.94■■■□□ 2.06
ABCF3-209ENST00000472608 SMARCA4P51532 1647 aa27.85■■■□□ 2.05
ABCF3-209ENST00000472608 THOC2Q8NI27 1593 aaKnown RBP27.81■■■□□ 2.04
ABCF3-209ENST00000472608 BAZ1BQ9UIG0 1483 aaKnown RBP27.72■■■□□ 2.03
ABCF3-209ENST00000472608 LAMC3Q9Y6N6 1575 aa27.69■■■□□ 2.02
ABCF3-209ENST00000472608 PEG3Q9GZU2 1588 aa27.67■■■□□ 2.02
ABCF3-209ENST00000472608 BAZ1AQ9NRL2 1556 aaPredicted RBP27.64■■■□□ 2.01
ABCF3-209ENST00000472608 PDS5BQ9NTI5 1447 aa27.58■■■□□ 2
ABCF3-209ENST00000472608 TRIM41Q8WV44 630 aa27.57■■■□□ 2
ABCF3-209ENST00000472608 KIF21AQ7Z4S6 1674 aa27.52■■■□□ 2
ABCF3-209ENST00000472608 MROH2BQ7Z745 1585 aa27.39■■□□□ 1.97
ABCF3-209ENST00000472608 CADPSQ9ULU8 1353 aa27.38■■□□□ 1.97
ABCF3-209ENST00000472608 MRC2Q9UBG0 1479 aa27.35■■□□□ 1.97
ABCF3-209ENST00000472608 WDR62O43379 1518 aa27.32■■□□□ 1.96
ABCF3-209ENST00000472608 OSCARQ8IYS5 282 aa27.13■■□□□ 1.93
ABCF3-209ENST00000472608 CEP164Q9UPV0 1460 aa27.09■■□□□ 1.93
ABCF3-209ENST00000472608 FANCD2Q9BXW9 1451 aa27.02■■□□□ 1.92
ABCF3-209ENST00000472608 WIZO95785 1651 aa26.97■■□□□ 1.91
ABCF3-209ENST00000472608 CFTRP13569 1480 aa26.95■■□□□ 1.91
ABCF3-209ENST00000472608 URB2Q14146 1524 aaKnown RBP26.85■■□□□ 1.89
ABCF3-209ENST00000472608 RIMBP3CA6NJZ7 1639 aa26.78■■□□□ 1.88
ABCF3-209ENST00000472608 RIMBP3BA6NNM3 1639 aa26.78■■□□□ 1.88
ABCF3-209ENST00000472608 RIMBP3Q9UFD9 1639 aa26.78■■□□□ 1.88
ABCF3-209ENST00000472608 ARHGEF11O15085 1522 aa26.66■■□□□ 1.86
ABCF3-209ENST00000472608 TOP2AP11388 1531 aaKnown RBP26.64■■□□□ 1.85
ABCF3-209ENST00000472608 RSF1Q96T23 1441 aaPredicted RBP26.63■■□□□ 1.85
ABCF3-209ENST00000472608 IFT140Q96RY7 1462 aa26.62■■□□□ 1.85
ABCF3-209ENST00000472608 ZNF608Q9ULD9 1512 aaPredicted RBP26.61■■□□□ 1.85
ABCF3-209ENST00000472608 PRDM2Q13029 1718 aa26.5■■□□□ 1.83
ABCF3-209ENST00000472608 CYB5RLQ6IPT4 315 aa26.49■■□□□ 1.83
ABCF3-209ENST00000472608 TOPBP1Q92547 1522 aa26.45■■□□□ 1.83
ABCF3-209ENST00000472608 EIF4G3O43432 1585 aaKnown RBP26.39■■□□□ 1.82
ABCF3-209ENST00000472608 ABCC8Q09428 1581 aa26.38■■□□□ 1.81
ABCF3-209ENST00000472608 ARAP1Q96P48 1450 aa26.37■■□□□ 1.81
ABCF3-209ENST00000472608 CCDC88BA6NC98 1476 aa26.36■■□□□ 1.81
ABCF3-209ENST00000472608 TRHP20396 242 aaPredicted RBP26.34■■□□□ 1.81
ABCF3-209ENST00000472608 AQRO60306 1485 aaKnown RBP eCLIP26.3■■□□□ 1.82e-8■■■■■ 28.7
ABCF3-209ENST00000472608 DNMBPQ6XZF7 1577 aa26.29■■□□□ 1.8
ABCF3-209ENST00000472608 TARBP1Q13395 1621 aaKnown RBP26.27■■□□□ 1.8
ABCF3-209ENST00000472608 CHD1O14646 1710 aa26.27■■□□□ 1.8
ABCF3-209ENST00000472608 FBLN2P98095 1184 aa26.17■■□□□ 1.78
ABCF3-209ENST00000472608 POLA1P09884 1462 aaPredicted RBP26.15■■□□□ 1.78
ABCF3-209ENST00000472608 CLASP1Q7Z460 1538 aa26.06■■□□□ 1.76
ABCF3-209ENST00000472608 RAD54L2Q9Y4B4 1467 aa26.04■■□□□ 1.76
ABCF3-209ENST00000472608 AEBP2Q6ZN18 517 aaPredicted RBP26.03■■□□□ 1.76
ABCF3-209ENST00000472608 TDRD9Q8NDG6 1382 aaKnown RBP26.03■■□□□ 1.76
ABCF3-209ENST00000472608 SOGA1O94964 1423 aa26.02■■□□□ 1.76
ABCF3-209ENST00000472608 WDR97A6NE52 1622 aa25.99■■□□□ 1.75
ABCF3-209ENST00000472608 SNAPC4Q5SXM2 1469 aa25.98■■□□□ 1.75
ABCF3-209ENST00000472608 MAGI1Q96QZ7 1491 aaPredicted RBP25.94■■□□□ 1.74
ABCF3-209ENST00000472608 CHMP7Q8WUX9 453 aaPredicted RBP25.94■■□□□ 1.74
ABCF3-209ENST00000472608 SYNJ1O43426 1573 aa25.94■■□□□ 1.74
ABCF3-209ENST00000472608 SYNJ2O15056 1496 aa25.86■■□□□ 1.73
ABCF3-209ENST00000472608 GRIN2BQ13224 1484 aa25.86■■□□□ 1.73
ABCF3-209ENST00000472608 FGD5Q6ZNL6 1462 aa25.86■■□□□ 1.73
ABCF3-209ENST00000472608 GAPVD1Q14C86 1478 aa25.81■■□□□ 1.72
ABCF3-209ENST00000472608 CUX1P39880 1505 aa25.76■■□□□ 1.71
ABCF3-209ENST00000472608 PBRM1Q86U86 1689 aa25.62■■□□□ 1.69
ABCF3-209ENST00000472608 ABCA10Q8WWZ4 1543 aa25.59■■□□□ 1.69
ABCF3-209ENST00000472608 ERCC6L2Q5T890 1561 aa25.57■■□□□ 1.68
ABCF3-209ENST00000472608 ABCA5Q8WWZ7 1642 aa25.56■■□□□ 1.68
ABCF3-209ENST00000472608 SUPT5HO00267 1087 aaKnown RBP25.52■■□□□ 1.68
ABCF3-209ENST00000472608 GRIN2AQ12879 1464 aa25.52■■□□□ 1.68
ABCF3-209ENST00000472608 NUP160Q12769 1436 aa25.51■■□□□ 1.67
ABCF3-209ENST00000472608 CEP170Q5SW79 1584 aa25.48■■□□□ 1.67
ABCF3-209ENST00000472608 SHROOM2Q13796 1616 aa25.43■■□□□ 1.66
ABCF3-209ENST00000472608 ADAMTS12P58397 1594 aa25.39■■□□□ 1.66
ABCF3-209ENST00000472608 KIF13AQ9H1H9 1805 aa25.37■■□□□ 1.65
ABCF3-209ENST00000472608 FHAD1B1AJZ9 1412 aa25.36■■□□□ 1.65
ABCF3-209ENST00000472608 WRNQ14191 1432 aaPredicted RBP eCLIP25.35■■□□□ 1.65
ABCF3-209ENST00000472608 PRG4Q92954 1404 aaPredicted RBP25.26■■□□□ 1.63
ABCF3-209ENST00000472608 ABCC10Q5T3U5 1492 aa25.25■■□□□ 1.63
ABCF3-209ENST00000472608 ERICH3Q5RHP9 1530 aa25.24■■□□□ 1.63
ABCF3-209ENST00000472608 JPH4Q96JJ6 628 aa25.23■■□□□ 1.63
ABCF3-209ENST00000472608 FAM69CQ0P6D2 419 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 454.5 ms