RNA–Protein interactions for RNA: ENST00000465422.1

SVIL-207, Transcript of supervillin, humanhuman

TSL 3

Gene SVIL, Length 196 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIL-207ENST00000465422 NISCHQ9Y2I1 1504 aa36.83■■■■□ 3.49
SVIL-207ENST00000465422 CCDC180Q9P1Z9 1646 aa32.51■■■□□ 2.8
SVIL-207ENST00000465422 ABCC9O60706 1549 aa31.29■■■□□ 2.6
SVIL-207ENST00000465422 ZCCHC6Q5VYS8 1495 aaKnown RBP30.77■■■□□ 2.52
SVIL-207ENST00000465422 DCAF8L2P0C7V8 631 aa30.77■■■□□ 2.52
SVIL-207ENST00000465422 DCAF1Q9Y4B6 1507 aa30.52■■■□□ 2.48
SVIL-207ENST00000465422 NACADO15069 1562 aa30.49■■■□□ 2.47
SVIL-207ENST00000465422 MYO15BQ96JP2 1530 aa30.45■■■□□ 2.47
SVIL-207ENST00000465422 RB1CC1Q8TDY2 1594 aa30.4■■■□□ 2.46
SVIL-207ENST00000465422 SCRIBQ14160 1630 aa29.69■■■□□ 2.34
SVIL-207ENST00000465422 UNC13AQ9UPW8 1703 aa29.53■■■□□ 2.32
SVIL-207ENST00000465422 SHROOM4Q9ULL8 1493 aa29.48■■■□□ 2.31
SVIL-207ENST00000465422 PABPN1Q86U42 306 aaKnown RBP eCLIP29.36■■■□□ 2.29
SVIL-207ENST00000465422 BICRAQ9NZM4 1560 aa29.27■■■□□ 2.28
SVIL-207ENST00000465422 BAZ1AQ9NRL2 1556 aaPredicted RBP28.57■■■□□ 2.16
SVIL-207ENST00000465422 EIF4G1Q04637 1599 aaKnown RBP28.56■■■□□ 2.16
SVIL-207ENST00000465422 CECR2Q9BXF3 1484 aa28.56■■■□□ 2.16
SVIL-207ENST00000465422 SMARCA4P51532 1647 aa28.44■■■□□ 2.14
SVIL-207ENST00000465422 MROH2BQ7Z745 1585 aa28.34■■■□□ 2.13
SVIL-207ENST00000465422 CC2D2AQ9P2K1 1620 aa28.3■■■□□ 2.12
SVIL-207ENST00000465422 RSF1Q96T23 1441 aaPredicted RBP28.26■■■□□ 2.12
SVIL-207ENST00000465422 SMARCA2P51531 1590 aa28.24■■■□□ 2.11
SVIL-207ENST00000465422 ATAD2BQ9ULI0 1458 aa28.17■■■□□ 2.1
SVIL-207ENST00000465422 PEG3Q9GZU2 1588 aa28.14■■■□□ 2.1
SVIL-207ENST00000465422 SUPT5HO00267 1087 aaKnown RBP28.12■■■□□ 2.09
SVIL-207ENST00000465422 DNAJC5BQ9UF47 199 aa28.1■■■□□ 2.09
SVIL-207ENST00000465422 NCAPD3P42695 1498 aa28.09■■■□□ 2.09
SVIL-207ENST00000465422 WIZO95785 1651 aa28.07■■■□□ 2.08
SVIL-207ENST00000465422 BAZ1BQ9UIG0 1483 aaKnown RBP28.04■■■□□ 2.08
SVIL-207ENST00000465422 HMGXB3Q12766 1538 aa28■■■□□ 2.07
SVIL-207ENST00000465422 TOP2AP11388 1531 aaKnown RBP27.87■■■□□ 2.05
SVIL-207ENST00000465422 CCDC88BA6NC98 1476 aa27.52■■■□□ 2
SVIL-207ENST00000465422 CADPSQ9ULU8 1353 aa27.35■■□□□ 1.97
SVIL-207ENST00000465422 LAMC3Q9Y6N6 1575 aa27.29■■□□□ 1.96
SVIL-207ENST00000465422 CFTRP13569 1480 aa27.25■■□□□ 1.95
SVIL-207ENST00000465422 PDS5BQ9NTI5 1447 aa27.17■■□□□ 1.94
SVIL-207ENST00000465422 NESP48681 1621 aa27.16■■□□□ 1.94
SVIL-207ENST00000465422 PRDM2Q13029 1718 aa27.07■■□□□ 1.92
SVIL-207ENST00000465422 ERCC6Q03468 1493 aa27.05■■□□□ 1.92
SVIL-207ENST00000465422 FANCD2Q9BXW9 1451 aa27.01■■□□□ 1.91
SVIL-207ENST00000465422 CEP164Q9UPV0 1460 aa26.96■■□□□ 1.91
SVIL-207ENST00000465422 KIF21AQ7Z4S6 1674 aa26.87■■□□□ 1.89
SVIL-207ENST00000465422 MRC2Q9UBG0 1479 aa26.78■■□□□ 1.88
SVIL-207ENST00000465422 ABCC8Q09428 1581 aa26.78■■□□□ 1.88
SVIL-207ENST00000465422 WRNQ14191 1432 aaPredicted RBP eCLIP26.72■■□□□ 1.87
SVIL-207ENST00000465422 DNMBPQ6XZF7 1577 aa26.64■■□□□ 1.86
SVIL-207ENST00000465422 URB2Q14146 1524 aaKnown RBP26.62■■□□□ 1.85
SVIL-207ENST00000465422 THOC2Q8NI27 1593 aaKnown RBP26.62■■□□□ 1.85
SVIL-207ENST00000465422 WDR62O43379 1518 aa26.61■■□□□ 1.85
SVIL-207ENST00000465422 TOPBP1Q92547 1522 aa26.6■■□□□ 1.85
SVIL-207ENST00000465422 TRIM41Q8WV44 630 aa26.6■■□□□ 1.85
SVIL-207ENST00000465422 CUX1P39880 1505 aa26.56■■□□□ 1.84
SVIL-207ENST00000465422 TOP2BQ02880 1626 aa26.54■■□□□ 1.84
SVIL-207ENST00000465422 CHIC1Q5VXU3 224 aa26.5■■□□□ 1.83
SVIL-207ENST00000465422 BIVM-ERCC5R4GMW8 1640 aa26.5■■□□□ 1.83
SVIL-207ENST00000465422 SYNJ1O43426 1573 aa26.5■■□□□ 1.83
SVIL-207ENST00000465422 CUX2O14529 1486 aa26.49■■□□□ 1.83
SVIL-207ENST00000465422 FGD5Q6ZNL6 1462 aa26.44■■□□□ 1.82
SVIL-207ENST00000465422 POLA1P09884 1462 aaPredicted RBP26.41■■□□□ 1.82
SVIL-207ENST00000465422 SOGA1O94964 1423 aa26.4■■□□□ 1.82
SVIL-207ENST00000465422 IFT140Q96RY7 1462 aa26.37■■□□□ 1.81
SVIL-207ENST00000465422 RAD54L2Q9Y4B4 1467 aa26.28■■□□□ 1.8
SVIL-207ENST00000465422 ABCA10Q8WWZ4 1543 aa26.22■■□□□ 1.79
SVIL-207ENST00000465422 TARBP1Q13395 1621 aaKnown RBP26.21■■□□□ 1.79
SVIL-207ENST00000465422 KIF27Q86VH2 1401 aa26.17■■□□□ 1.78
SVIL-207ENST00000465422 WDR97A6NE52 1622 aa26.17■■□□□ 1.78
SVIL-207ENST00000465422 TDRD9Q8NDG6 1382 aaKnown RBP26.14■■□□□ 1.78
SVIL-207ENST00000465422 GAPVD1Q14C86 1478 aa26.09■■□□□ 1.77
SVIL-207ENST00000465422 ZNF608Q9ULD9 1512 aaPredicted RBP26.08■■□□□ 1.77
SVIL-207ENST00000465422 EEA1Q15075 1411 aa26.07■■□□□ 1.76
SVIL-207ENST00000465422 AQRO60306 1485 aaKnown RBP eCLIP26.07■■□□□ 1.76
SVIL-207ENST00000465422 EIF4G3O43432 1585 aaKnown RBP26.03■■□□□ 1.76
SVIL-207ENST00000465422 GRIN2BQ13224 1484 aa26.02■■□□□ 1.76
SVIL-207ENST00000465422 ABCA5Q8WWZ7 1642 aa26■■□□□ 1.75
SVIL-207ENST00000465422 FAM9AQ8IZU1 332 aaPredicted RBP25.97■■□□□ 1.75
SVIL-207ENST00000465422 ERICH3Q5RHP9 1530 aa25.95■■□□□ 1.74
SVIL-207ENST00000465422 CSRNP3Q8WYN3 585 aa25.94■■□□□ 1.74
SVIL-207ENST00000465422 PBRM1Q86U86 1689 aa25.92■■□□□ 1.74
SVIL-207ENST00000465422 RUSC2Q8N2Y8 1516 aa25.91■■□□□ 1.74
SVIL-207ENST00000465422 IGF1RP08069 1367 aa25.9■■□□□ 1.74
SVIL-207ENST00000465422 MAGI1Q96QZ7 1491 aaPredicted RBP25.88■■□□□ 1.73
SVIL-207ENST00000465422 SNAPC4Q5SXM2 1469 aa25.85■■□□□ 1.73
SVIL-207ENST00000465422 CHMP7Q8WUX9 453 aaPredicted RBP25.84■■□□□ 1.73
SVIL-207ENST00000465422 CUL7Q14999 1698 aa25.83■■□□□ 1.73
SVIL-207ENST00000465422 CARMIL1Q5VZK9 1371 aa25.82■■□□□ 1.72
SVIL-207ENST00000465422 FHAD1B1AJZ9 1412 aa25.82■■□□□ 1.72
SVIL-207ENST00000465422 FBLN2P98095 1184 aa25.82■■□□□ 1.72
SVIL-207ENST00000465422 SYNJ2O15056 1496 aa25.77■■□□□ 1.72
SVIL-207ENST00000465422 ADAMTS12P58397 1594 aa25.74■■□□□ 1.71
SVIL-207ENST00000465422 RAPGEF2Q9Y4G8 1499 aa25.72■■□□□ 1.71
SVIL-207ENST00000465422 PRXQ9BXM0 1461 aa25.68■■□□□ 1.7
SVIL-207ENST00000465422 GRIN2AQ12879 1464 aa25.64■■□□□ 1.69
SVIL-207ENST00000465422 KIF21BO75037 1637 aa25.63■■□□□ 1.69
SVIL-207ENST00000465422 UBTFP17480 764 aaKnown RBP25.61■■□□□ 1.69
SVIL-207ENST00000465422 GOLGA3Q08378 1498 aa25.6■■□□□ 1.69
SVIL-207ENST00000465422 OSCARQ8IYS5 282 aa25.6■■□□□ 1.69
SVIL-207ENST00000465422 CHD1O14646 1710 aa25.59■■□□□ 1.69
SVIL-207ENST00000465422 EHMT2Q96KQ7 1210 aa25.57■■□□□ 1.68
SVIL-207ENST00000465422 NUP160Q12769 1436 aa25.47■■□□□ 1.67
SVIL-207ENST00000465422 KIAA0586Q9BVV6 1533 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms