RNA–Protein interactions for RNA: ENST00000508835.5

SLC41A3-211, Transcript of solute carrier family 41 member 3, humanhuman

TSL 2 BASIC

Gene SLC41A3, Length 1,480 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC41A3-211ENST00000508835 NISCHQ9Y2I1 1504 aa35.31■■■■□ 3.24
SLC41A3-211ENST00000508835 CCDC180Q9P1Z9 1646 aa31.55■■■□□ 2.64
SLC41A3-211ENST00000508835 ABCC9O60706 1549 aa31.29■■■□□ 2.6
SLC41A3-211ENST00000508835 RB1CC1Q8TDY2 1594 aa29.91■■■□□ 2.38
SLC41A3-211ENST00000508835 DCAF8L2P0C7V8 631 aa29.79■■■□□ 2.36
SLC41A3-211ENST00000508835 NACADO15069 1562 aa29.75■■■□□ 2.35
SLC41A3-211ENST00000508835 MYO15BQ96JP2 1530 aa29.41■■■□□ 2.3
SLC41A3-211ENST00000508835 ZCCHC6Q5VYS8 1495 aaKnown RBP29.34■■■□□ 2.29
SLC41A3-211ENST00000508835 UNC13AQ9UPW8 1703 aa29.2■■■□□ 2.27
SLC41A3-211ENST00000508835 PABPN1Q86U42 306 aaKnown RBP eCLIP29.18■■■□□ 2.26
SLC41A3-211ENST00000508835 DCAF1Q9Y4B6 1507 aa29.16■■■□□ 2.26
SLC41A3-211ENST00000508835 DNAJC5BQ9UF47 199 aa28.97■■■□□ 2.23
SLC41A3-211ENST00000508835 BICRAQ9NZM4 1560 aa28.96■■■□□ 2.23
SLC41A3-211ENST00000508835 SCRIBQ14160 1630 aa28.83■■■□□ 2.21
SLC41A3-211ENST00000508835 SHROOM4Q9ULL8 1493 aa28.63■■■□□ 2.17
SLC41A3-211ENST00000508835 EIF4G1Q04637 1599 aaKnown RBP28.28■■■□□ 2.12
SLC41A3-211ENST00000508835 CC2D2AQ9P2K1 1620 aa28.25■■■□□ 2.11
SLC41A3-211ENST00000508835 CECR2Q9BXF3 1484 aa28.14■■■□□ 2.1
SLC41A3-211ENST00000508835 SMARCA4P51532 1647 aa27.5■■□□□ 1.99
SLC41A3-211ENST00000508835 NCAPD3P42695 1498 aa27.44■■□□□ 1.98
SLC41A3-211ENST00000508835 ATAD2BQ9ULI0 1458 aa27.43■■□□□ 1.98
SLC41A3-211ENST00000508835 BAZ1AQ9NRL2 1556 aaPredicted RBP27.42■■□□□ 1.98
SLC41A3-211ENST00000508835 SMARCA2P51531 1590 aa27.4■■□□□ 1.98
SLC41A3-211ENST00000508835 HMGXB3Q12766 1538 aa27.3■■□□□ 1.96
SLC41A3-211ENST00000508835 BAZ1BQ9UIG0 1483 aaKnown RBP27.23■■□□□ 1.95
SLC41A3-211ENST00000508835 MROH2BQ7Z745 1585 aa27.23■■□□□ 1.95
SLC41A3-211ENST00000508835 PEG3Q9GZU2 1588 aa27.19■■□□□ 1.94
SLC41A3-211ENST00000508835 ERCC6Q03468 1493 aa27.03■■□□□ 1.92
SLC41A3-211ENST00000508835 NESP48681 1621 aa26.95■■□□□ 1.9
SLC41A3-211ENST00000508835 WIZO95785 1651 aa26.93■■□□□ 1.9
SLC41A3-211ENST00000508835 CUX2O14529 1486 aa26.81■■□□□ 1.88
SLC41A3-211ENST00000508835 LAMC3Q9Y6N6 1575 aa26.81■■□□□ 1.88
SLC41A3-211ENST00000508835 RSF1Q96T23 1441 aaPredicted RBP26.78■■□□□ 1.88
SLC41A3-211ENST00000508835 PDS5BQ9NTI5 1447 aa26.66■■□□□ 1.86
SLC41A3-211ENST00000508835 CADPSQ9ULU8 1353 aa26.65■■□□□ 1.86
SLC41A3-211ENST00000508835 KIF21AQ7Z4S6 1674 aa26.62■■□□□ 1.85
SLC41A3-211ENST00000508835 TOP2AP11388 1531 aaKnown RBP26.61■■□□□ 1.85
SLC41A3-211ENST00000508835 THOC2Q8NI27 1593 aaKnown RBP26.6■■□□□ 1.85
SLC41A3-211ENST00000508835 CFTRP13569 1480 aa26.41■■□□□ 1.82
SLC41A3-211ENST00000508835 MRC2Q9UBG0 1479 aa26.41■■□□□ 1.82
SLC41A3-211ENST00000508835 CEP164Q9UPV0 1460 aa26.39■■□□□ 1.82
SLC41A3-211ENST00000508835 DNAJC5Q9H3Z4 198 aa26.38■■□□□ 1.81
SLC41A3-211ENST00000508835 FANCD2Q9BXW9 1451 aa26.38■■□□□ 1.81
SLC41A3-211ENST00000508835 WDR62O43379 1518 aa26.31■■□□□ 1.8
SLC41A3-211ENST00000508835 CCDC88BA6NC98 1476 aa26.29■■□□□ 1.8
SLC41A3-211ENST00000508835 PRDM2Q13029 1718 aa26.2■■□□□ 1.78
SLC41A3-211ENST00000508835 URB2Q14146 1524 aaKnown RBP26.11■■□□□ 1.77
SLC41A3-211ENST00000508835 SUPT5HO00267 1087 aaKnown RBP25.92■■□□□ 1.74
SLC41A3-211ENST00000508835 TOPBP1Q92547 1522 aa25.9■■□□□ 1.74
SLC41A3-211ENST00000508835 ABCC8Q09428 1581 aa25.86■■□□□ 1.73
SLC41A3-211ENST00000508835 DNMBPQ6XZF7 1577 aa25.84■■□□□ 1.73
SLC41A3-211ENST00000508835 IFT140Q96RY7 1462 aa25.82■■□□□ 1.72
SLC41A3-211ENST00000508835 ZNF608Q9ULD9 1512 aaPredicted RBP25.75■■□□□ 1.71
SLC41A3-211ENST00000508835 POLA1P09884 1462 aaPredicted RBP25.66■■□□□ 1.7
SLC41A3-211ENST00000508835 OSCARQ8IYS5 282 aa25.66■■□□□ 1.7
SLC41A3-211ENST00000508835 EIF4G3O43432 1585 aaKnown RBP25.65■■□□□ 1.7
SLC41A3-211ENST00000508835 TARBP1Q13395 1621 aaKnown RBP25.62■■□□□ 1.69
SLC41A3-211ENST00000508835 AQRO60306 1485 aaKnown RBP eCLIP25.57■■□□□ 1.683e-7■■■■■ 30.5
SLC41A3-211ENST00000508835 CUX1P39880 1505 aa25.57■■□□□ 1.68
SLC41A3-211ENST00000508835 RAD54L2Q9Y4B4 1467 aa25.56■■□□□ 1.68
SLC41A3-211ENST00000508835 FGD5Q6ZNL6 1462 aa25.55■■□□□ 1.68
SLC41A3-211ENST00000508835 SOGA1O94964 1423 aa25.55■■□□□ 1.68
SLC41A3-211ENST00000508835 TRIM41Q8WV44 630 aa25.48■■□□□ 1.67
SLC41A3-211ENST00000508835 TDRD9Q8NDG6 1382 aaKnown RBP25.47■■□□□ 1.67
SLC41A3-211ENST00000508835 FBLN2P98095 1184 aa25.4■■□□□ 1.66
SLC41A3-211ENST00000508835 WDR97A6NE52 1622 aa25.39■■□□□ 1.66
SLC41A3-211ENST00000508835 CHD1O14646 1710 aa25.39■■□□□ 1.66
SLC41A3-211ENST00000508835 SNAPC4Q5SXM2 1469 aa25.34■■□□□ 1.65
SLC41A3-211ENST00000508835 GRIN2BQ13224 1484 aa25.3■■□□□ 1.64
SLC41A3-211ENST00000508835 WRNQ14191 1432 aaPredicted RBP eCLIP25.29■■□□□ 1.64
SLC41A3-211ENST00000508835 RIMBP3CA6NJZ7 1639 aa25.28■■□□□ 1.64
SLC41A3-211ENST00000508835 RIMBP3BA6NNM3 1639 aa25.28■■□□□ 1.64
SLC41A3-211ENST00000508835 RIMBP3Q9UFD9 1639 aa25.28■■□□□ 1.64
SLC41A3-211ENST00000508835 GAPVD1Q14C86 1478 aa25.26■■□□□ 1.63
SLC41A3-211ENST00000508835 MAGI1Q96QZ7 1491 aaPredicted RBP25.26■■□□□ 1.63
SLC41A3-211ENST00000508835 ABCA10Q8WWZ4 1543 aa25.26■■□□□ 1.63
SLC41A3-211ENST00000508835 TOP2BQ02880 1626 aa25.25■■□□□ 1.63
SLC41A3-211ENST00000508835 BIVM-ERCC5R4GMW8 1640 aa25.24■■□□□ 1.63
SLC41A3-211ENST00000508835 CHMP7Q8WUX9 453 aaPredicted RBP25.24■■□□□ 1.63
SLC41A3-211ENST00000508835 SYNJ1O43426 1573 aa25.24■■□□□ 1.63
SLC41A3-211ENST00000508835 ARHGEF11O15085 1522 aa25.24■■□□□ 1.63
SLC41A3-211ENST00000508835 PBRM1Q86U86 1689 aa25.23■■□□□ 1.63
SLC41A3-211ENST00000508835 ABCA5Q8WWZ7 1642 aa25.2■■□□□ 1.62
SLC41A3-211ENST00000508835 SYNJ2O15056 1496 aa25.17■■□□□ 1.62
SLC41A3-211ENST00000508835 CLASP1Q7Z460 1538 aa25.07■■□□□ 1.6
SLC41A3-211ENST00000508835 CYB5RLQ6IPT4 315 aa25.05■■□□□ 1.6
SLC41A3-211ENST00000508835 ADAMTS12P58397 1594 aa25■■□□□ 1.59
SLC41A3-211ENST00000508835 ARAP1Q96P48 1450 aa25■■□□□ 1.59
SLC41A3-211ENST00000508835 GRIN2AQ12879 1464 aa24.97■■□□□ 1.59
SLC41A3-211ENST00000508835 ERICH3Q5RHP9 1530 aa24.96■■□□□ 1.59
SLC41A3-211ENST00000508835 FHAD1B1AJZ9 1412 aa24.94■■□□□ 1.58
SLC41A3-211ENST00000508835 CEP170Q5SW79 1584 aa24.86■■□□□ 1.57
SLC41A3-211ENST00000508835 NUP160Q12769 1436 aa24.85■■□□□ 1.57
SLC41A3-211ENST00000508835 KIF27Q86VH2 1401 aa24.8■■□□□ 1.56
SLC41A3-211ENST00000508835 ERCC6L2Q5T890 1561 aa24.72■■□□□ 1.55
SLC41A3-211ENST00000508835 TRHP20396 242 aaPredicted RBP24.71■■□□□ 1.55
SLC41A3-211ENST00000508835 IGF1RP08069 1367 aa24.7■■□□□ 1.54
SLC41A3-211ENST00000508835 SHROOM2Q13796 1616 aa24.69■■□□□ 1.54
SLC41A3-211ENST00000508835 CUL7Q14999 1698 aa24.68■■□□□ 1.54
SLC41A3-211ENST00000508835 RUSC2Q8N2Y8 1516 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms