RNA–Protein interactions for RNA: ENST00000450633.6

TPRA1-204, Transcript of transmembrane protein adipocyte associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPRA1, Length 1,865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRA1-204ENST00000450633 NISCHQ9Y2I1 1504 aa40.35■■■■■ 4.05
TPRA1-204ENST00000450633 CCDC180Q9P1Z9 1646 aa34.96■■■■□ 3.19
TPRA1-204ENST00000450633 ZCCHC6Q5VYS8 1495 aaKnown RBP33.97■■■■□ 3.03
TPRA1-204ENST00000450633 DCAF1Q9Y4B6 1507 aa33.34■■■□□ 2.93
TPRA1-204ENST00000450633 SHROOM4Q9ULL8 1493 aa33.21■■■□□ 2.91
TPRA1-204ENST00000450633 DCAF8L2P0C7V8 631 aa33.17■■■□□ 2.9
TPRA1-204ENST00000450633 MYO15BQ96JP2 1530 aa32.79■■■□□ 2.84
TPRA1-204ENST00000450633 ABCC9O60706 1549 aa32.78■■■□□ 2.84
TPRA1-204ENST00000450633 NACADO15069 1562 aa32.48■■■□□ 2.79
TPRA1-204ENST00000450633 SCRIBQ14160 1630 aa32.26■■■□□ 2.75
TPRA1-204ENST00000450633 RB1CC1Q8TDY2 1594 aa32.1■■■□□ 2.73
TPRA1-204ENST00000450633 SUPT5HO00267 1087 aaKnown RBP32.1■■■□□ 2.73
TPRA1-204ENST00000450633 UNC13AQ9UPW8 1703 aa31.51■■■□□ 2.64
TPRA1-204ENST00000450633 RSF1Q96T23 1441 aaPredicted RBP31.47■■■□□ 2.63
TPRA1-204ENST00000450633 CECR2Q9BXF3 1484 aa31.36■■■□□ 2.61
TPRA1-204ENST00000450633 MROH2BQ7Z745 1585 aa31.22■■■□□ 2.59
TPRA1-204ENST00000450633 BICRAQ9NZM4 1560 aa31.21■■■□□ 2.59
TPRA1-204ENST00000450633 BAZ1AQ9NRL2 1556 aaPredicted RBP31.1■■■□□ 2.57
TPRA1-204ENST00000450633 PABPN1Q86U42 306 aaKnown RBP eCLIP31■■■□□ 2.55
TPRA1-204ENST00000450633 WIZO95785 1651 aa30.97■■■□□ 2.55
TPRA1-204ENST00000450633 CHIC1Q5VXU3 224 aa30.95■■■□□ 2.55
TPRA1-204ENST00000450633 SMARCA4P51532 1647 aa30.93■■■□□ 2.54
TPRA1-204ENST00000450633 TOP2AP11388 1531 aaKnown RBP30.63■■■□□ 2.49
TPRA1-204ENST00000450633 PEG3Q9GZU2 1588 aa30.53■■■□□ 2.48
TPRA1-204ENST00000450633 SMARCA2P51531 1590 aa30.38■■■□□ 2.45
TPRA1-204ENST00000450633 CCDC88BA6NC98 1476 aa30.35■■■□□ 2.45
TPRA1-204ENST00000450633 ATAD2BQ9ULI0 1458 aa30.34■■■□□ 2.45
TPRA1-204ENST00000450633 EIF4G1Q04637 1599 aaKnown RBP30.32■■■□□ 2.44
TPRA1-204ENST00000450633 BAZ1BQ9UIG0 1483 aaKnown RBP30.17■■■□□ 2.42
TPRA1-204ENST00000450633 TRIM41Q8WV44 630 aa30.13■■■□□ 2.41
TPRA1-204ENST00000450633 NCAPD3P42695 1498 aa30■■■□□ 2.39
TPRA1-204ENST00000450633 HMGXB3Q12766 1538 aa29.98■■■□□ 2.39
TPRA1-204ENST00000450633 ABCC8Q09428 1581 aa29.85■■■□□ 2.37
TPRA1-204ENST00000450633 LOC105371045A0A1W2PR82 267 aa29.8■■■□□ 2.36
TPRA1-204ENST00000450633 CC2D2AQ9P2K1 1620 aa29.66■■■□□ 2.34
TPRA1-204ENST00000450633 FAM9AQ8IZU1 332 aaPredicted RBP29.63■■■□□ 2.33
TPRA1-204ENST00000450633 WRNQ14191 1432 aaPredicted RBP eCLIP29.58■■■□□ 2.33
TPRA1-204ENST00000450633 SYNJ1O43426 1573 aa29.48■■■□□ 2.31
TPRA1-204ENST00000450633 CFTRP13569 1480 aa29.45■■■□□ 2.3
TPRA1-204ENST00000450633 SOGA1O94964 1423 aa29.37■■■□□ 2.29
TPRA1-204ENST00000450633 EEA1Q15075 1411 aa29.32■■■□□ 2.28
TPRA1-204ENST00000450633 TOP2BQ02880 1626 aa29.3■■■□□ 2.28
TPRA1-204ENST00000450633 PRDM2Q13029 1718 aa29.27■■■□□ 2.28
TPRA1-204ENST00000450633 BIVM-ERCC5R4GMW8 1640 aa29.26■■■□□ 2.27
TPRA1-204ENST00000450633 CADPSQ9ULU8 1353 aa29.26■■■□□ 2.27
TPRA1-204ENST00000450633 RUSC2Q8N2Y8 1516 aa29.25■■■□□ 2.27
TPRA1-204ENST00000450633 EHMT2Q96KQ7 1210 aa29.21■■■□□ 2.27
TPRA1-204ENST00000450633 CUX1P39880 1505 aa29.15■■■□□ 2.26
TPRA1-204ENST00000450633 CSRNP3Q8WYN3 585 aa29.14■■■□□ 2.26
TPRA1-204ENST00000450633 KIF21BO75037 1637 aa28.95■■■□□ 2.22
TPRA1-204ENST00000450633 GOLGA3Q08378 1498 aa28.95■■■□□ 2.22
TPRA1-204ENST00000450633 FANCD2Q9BXW9 1451 aa28.94■■■□□ 2.22
TPRA1-204ENST00000450633 TNIKQ9UKE5 1360 aa28.94■■■□□ 2.22
TPRA1-204ENST00000450633 NESP48681 1621 aa28.92■■■□□ 2.22
TPRA1-204ENST00000450633 CEP164Q9UPV0 1460 aa28.91■■■□□ 2.22
TPRA1-204ENST00000450633 LAMC3Q9Y6N6 1575 aa28.89■■■□□ 2.22
TPRA1-204ENST00000450633 DNAJC5BQ9UF47 199 aa28.89■■■□□ 2.21
TPRA1-204ENST00000450633 CEP162Q5TB80 1403 aa28.83■■■□□ 2.21
TPRA1-204ENST00000450633 PCGF6Q9BYE7 350 aa28.8■■■□□ 2.2
TPRA1-204ENST00000450633 UBTFP17480 764 aaKnown RBP28.78■■■□□ 2.2
TPRA1-204ENST00000450633 KIF27Q86VH2 1401 aa28.77■■■□□ 2.2
TPRA1-204ENST00000450633 FGD5Q6ZNL6 1462 aa28.76■■■□□ 2.19
TPRA1-204ENST00000450633 DNMBPQ6XZF7 1577 aa28.75■■■□□ 2.19
TPRA1-204ENST00000450633 RAPGEF2Q9Y4G8 1499 aa28.74■■■□□ 2.19
TPRA1-204ENST00000450633 PRXQ9BXM0 1461 aa28.72■■■□□ 2.19
TPRA1-204ENST00000450633 TRIM26Q12899 539 aaPredicted RBP28.68■■■□□ 2.18
TPRA1-204ENST00000450633 TOPBP1Q92547 1522 aa28.68■■■□□ 2.18
TPRA1-204ENST00000450633 ERICH3Q5RHP9 1530 aa28.68■■■□□ 2.18
TPRA1-204ENST00000450633 PDS5BQ9NTI5 1447 aa28.65■■■□□ 2.18
TPRA1-204ENST00000450633 CUX2O14529 1486 aa28.64■■■□□ 2.17
TPRA1-204ENST00000450633 URB2Q14146 1524 aaKnown RBP28.59■■■□□ 2.17
TPRA1-204ENST00000450633 POLA1P09884 1462 aaPredicted RBP28.57■■■□□ 2.16
TPRA1-204ENST00000450633 KIF21AQ7Z4S6 1674 aa28.54■■■□□ 2.16
TPRA1-204ENST00000450633 IGF1RP08069 1367 aa28.52■■■□□ 2.16
TPRA1-204ENST00000450633 CLIP1P30622 1438 aa28.52■■■□□ 2.16
TPRA1-204ENST00000450633 ABCA10Q8WWZ4 1543 aa28.51■■■□□ 2.15
TPRA1-204ENST00000450633 RAD54L2Q9Y4B4 1467 aa28.5■■■□□ 2.15
TPRA1-204ENST00000450633 WDR97A6NE52 1622 aa28.39■■■□□ 2.14
TPRA1-204ENST00000450633 PPARGC1BQ86YN6 1023 aaKnown RBP28.37■■■□□ 2.13
TPRA1-204ENST00000450633 CARMIL1Q5VZK9 1371 aa28.36■■■□□ 2.13
TPRA1-204ENST00000450633 VPS8Q8N3P4 1428 aa28.32■■■□□ 2.12
TPRA1-204ENST00000450633 HRCP23327 699 aa28.29■■■□□ 2.12
TPRA1-204ENST00000450633 MRC2Q9UBG0 1479 aa28.28■■■□□ 2.12
TPRA1-204ENST00000450633 ABCA5Q8WWZ7 1642 aa28.26■■■□□ 2.11
TPRA1-204ENST00000450633 RANGAP1P46060 587 aaPredicted RBP28.24■■■□□ 2.11
TPRA1-204ENST00000450633 TARBP1Q13395 1621 aaKnown RBP28.23■■■□□ 2.11
TPRA1-204ENST00000450633 ARAP1Q96P48 1450 aa28.23■■■□□ 2.11
TPRA1-204ENST00000450633 CUL7Q14999 1698 aa28.23■■■□□ 2.11
TPRA1-204ENST00000450633 TDRD9Q8NDG6 1382 aaKnown RBP28.18■■■□□ 2.1
TPRA1-204ENST00000450633 GAPVD1Q14C86 1478 aa28.16■■■□□ 2.1
TPRA1-204ENST00000450633 ARHGAP35Q9NRY4 1499 aa28.14■■■□□ 2.09
TPRA1-204ENST00000450633 WDR62O43379 1518 aa28.14■■■□□ 2.09
TPRA1-204ENST00000450633 TTBK1Q5TCY1 1321 aaPredicted RBP28.05■■■□□ 2.08
TPRA1-204ENST00000450633 ERCC6Q03468 1493 aa28.02■■■□□ 2.08
TPRA1-204ENST00000450633 IFT140Q96RY7 1462 aa27.99■■■□□ 2.07
TPRA1-204ENST00000450633 THOC2Q8NI27 1593 aaKnown RBP27.98■■■□□ 2.07
TPRA1-204ENST00000450633 PBRM1Q86U86 1689 aa27.97■■■□□ 2.07
TPRA1-204ENST00000450633 CTTNBP2Q8WZ74 1663 aa27.97■■■□□ 2.07
TPRA1-204ENST00000450633 APLP2Q06481 763 aa27.96■■■□□ 2.07
TPRA1-204ENST00000450633 AQRO60306 1485 aaKnown RBP eCLIP27.94■■■□□ 2.068e-7■■■■□ 23.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms