RNA–Protein interactions for RNA: ENST00000514333.5

SLC41A3-220, Transcript of solute carrier family 41 member 3, humanhuman

TSL 5

Gene SLC41A3, Length 588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC41A3-220ENST00000514333 NISCHQ9Y2I1 1504 aa37.01■■■■□ 3.52
SLC41A3-220ENST00000514333 CCDC180Q9P1Z9 1646 aa32.99■■■□□ 2.87
SLC41A3-220ENST00000514333 ABCC9O60706 1549 aa32.63■■■□□ 2.81
SLC41A3-220ENST00000514333 RB1CC1Q8TDY2 1594 aa31.26■■■□□ 2.59
SLC41A3-220ENST00000514333 NACADO15069 1562 aa31.17■■■□□ 2.58
SLC41A3-220ENST00000514333 DCAF8L2P0C7V8 631 aa31.13■■■□□ 2.57
SLC41A3-220ENST00000514333 MYO15BQ96JP2 1530 aa30.91■■■□□ 2.54
SLC41A3-220ENST00000514333 ZCCHC6Q5VYS8 1495 aaKnown RBP30.71■■■□□ 2.51
SLC41A3-220ENST00000514333 DCAF1Q9Y4B6 1507 aa30.63■■■□□ 2.49
SLC41A3-220ENST00000514333 PABPN1Q86U42 306 aaKnown RBP eCLIP30.5■■■□□ 2.47
SLC41A3-220ENST00000514333 UNC13AQ9UPW8 1703 aa30.5■■■□□ 2.47
SLC41A3-220ENST00000514333 DNAJC5BQ9UF47 199 aa30.39■■■□□ 2.46
SLC41A3-220ENST00000514333 BICRAQ9NZM4 1560 aa30.32■■■□□ 2.45
SLC41A3-220ENST00000514333 SCRIBQ14160 1630 aa30.03■■■□□ 2.4
SLC41A3-220ENST00000514333 SHROOM4Q9ULL8 1493 aa29.99■■■□□ 2.39
SLC41A3-220ENST00000514333 EIF4G1Q04637 1599 aaKnown RBP29.54■■■□□ 2.32
SLC41A3-220ENST00000514333 CC2D2AQ9P2K1 1620 aa29.5■■■□□ 2.31
SLC41A3-220ENST00000514333 CECR2Q9BXF3 1484 aa29.38■■■□□ 2.29
SLC41A3-220ENST00000514333 NCAPD3P42695 1498 aa28.82■■■□□ 2.2
SLC41A3-220ENST00000514333 SMARCA4P51532 1647 aa28.74■■■□□ 2.19
SLC41A3-220ENST00000514333 ATAD2BQ9ULI0 1458 aa28.73■■■□□ 2.19
SLC41A3-220ENST00000514333 BAZ1AQ9NRL2 1556 aaPredicted RBP28.69■■■□□ 2.18
SLC41A3-220ENST00000514333 SMARCA2P51531 1590 aa28.66■■■□□ 2.18
SLC41A3-220ENST00000514333 HMGXB3Q12766 1538 aa28.54■■■□□ 2.16
SLC41A3-220ENST00000514333 PEG3Q9GZU2 1588 aa28.51■■■□□ 2.15
SLC41A3-220ENST00000514333 MROH2BQ7Z745 1585 aa28.5■■■□□ 2.15
SLC41A3-220ENST00000514333 BAZ1BQ9UIG0 1483 aaKnown RBP28.43■■■□□ 2.14
SLC41A3-220ENST00000514333 WIZO95785 1651 aa28.15■■■□□ 2.1
SLC41A3-220ENST00000514333 ERCC6Q03468 1493 aa28.15■■■□□ 2.1
SLC41A3-220ENST00000514333 NESP48681 1621 aa28.14■■■□□ 2.1
SLC41A3-220ENST00000514333 RSF1Q96T23 1441 aaPredicted RBP28.09■■■□□ 2.09
SLC41A3-220ENST00000514333 LAMC3Q9Y6N6 1575 aa28.04■■■□□ 2.08
SLC41A3-220ENST00000514333 CUX2O14529 1486 aa28.02■■■□□ 2.08
SLC41A3-220ENST00000514333 CADPSQ9ULU8 1353 aa27.96■■■□□ 2.07
SLC41A3-220ENST00000514333 PDS5BQ9NTI5 1447 aa27.91■■■□□ 2.06
SLC41A3-220ENST00000514333 TOP2AP11388 1531 aaKnown RBP27.82■■■□□ 2.04
SLC41A3-220ENST00000514333 KIF21AQ7Z4S6 1674 aa27.75■■■□□ 2.03
SLC41A3-220ENST00000514333 THOC2Q8NI27 1593 aaKnown RBP27.73■■■□□ 2.03
SLC41A3-220ENST00000514333 CFTRP13569 1480 aa27.69■■■□□ 2.02
SLC41A3-220ENST00000514333 DNAJC5Q9H3Z4 198 aa27.68■■■□□ 2.02
SLC41A3-220ENST00000514333 MRC2Q9UBG0 1479 aa27.57■■■□□ 2
SLC41A3-220ENST00000514333 FANCD2Q9BXW9 1451 aa27.57■■■□□ 2
SLC41A3-220ENST00000514333 CCDC88BA6NC98 1476 aa27.56■■■□□ 2
SLC41A3-220ENST00000514333 CEP164Q9UPV0 1460 aa27.54■■■□□ 2
SLC41A3-220ENST00000514333 WDR62O43379 1518 aa27.49■■□□□ 1.99
SLC41A3-220ENST00000514333 PRDM2Q13029 1718 aa27.33■■□□□ 1.97
SLC41A3-220ENST00000514333 URB2Q14146 1524 aaKnown RBP27.3■■□□□ 1.96
SLC41A3-220ENST00000514333 ABCC8Q09428 1581 aa27.14■■□□□ 1.93
SLC41A3-220ENST00000514333 SUPT5HO00267 1087 aaKnown RBP27.13■■□□□ 1.93
SLC41A3-220ENST00000514333 TOPBP1Q92547 1522 aa27.08■■□□□ 1.93
SLC41A3-220ENST00000514333 IFT140Q96RY7 1462 aa27.01■■□□□ 1.91
SLC41A3-220ENST00000514333 DNMBPQ6XZF7 1577 aa27■■□□□ 1.91
SLC41A3-220ENST00000514333 OSCARQ8IYS5 282 aa26.91■■□□□ 1.9
SLC41A3-220ENST00000514333 ZNF608Q9ULD9 1512 aaPredicted RBP26.9■■□□□ 1.9
SLC41A3-220ENST00000514333 POLA1P09884 1462 aaPredicted RBP26.82■■□□□ 1.88
SLC41A3-220ENST00000514333 TARBP1Q13395 1621 aaKnown RBP26.81■■□□□ 1.88
SLC41A3-220ENST00000514333 SOGA1O94964 1423 aa26.78■■□□□ 1.88
SLC41A3-220ENST00000514333 CUX1P39880 1505 aa26.74■■□□□ 1.87
SLC41A3-220ENST00000514333 AQRO60306 1485 aaKnown RBP eCLIP26.74■■□□□ 1.87
SLC41A3-220ENST00000514333 RAD54L2Q9Y4B4 1467 aa26.72■■□□□ 1.87
SLC41A3-220ENST00000514333 EIF4G3O43432 1585 aaKnown RBP26.71■■□□□ 1.87
SLC41A3-220ENST00000514333 FGD5Q6ZNL6 1462 aa26.7■■□□□ 1.87
SLC41A3-220ENST00000514333 TDRD9Q8NDG6 1382 aaKnown RBP26.65■■□□□ 1.86
SLC41A3-220ENST00000514333 WDR97A6NE52 1622 aa26.58■■□□□ 1.85
SLC41A3-220ENST00000514333 FBLN2P98095 1184 aa26.51■■□□□ 1.83
SLC41A3-220ENST00000514333 TRIM41Q8WV44 630 aa26.51■■□□□ 1.83
SLC41A3-220ENST00000514333 WRNQ14191 1432 aaPredicted RBP eCLIP26.47■■□□□ 1.83
SLC41A3-220ENST00000514333 GRIN2BQ13224 1484 aa26.46■■□□□ 1.83
SLC41A3-220ENST00000514333 ABCA10Q8WWZ4 1543 aa26.45■■□□□ 1.83
SLC41A3-220ENST00000514333 CHD1O14646 1710 aa26.45■■□□□ 1.82
SLC41A3-220ENST00000514333 GAPVD1Q14C86 1478 aa26.42■■□□□ 1.82
SLC41A3-220ENST00000514333 CHMP7Q8WUX9 453 aaPredicted RBP26.42■■□□□ 1.82
SLC41A3-220ENST00000514333 TOP2BQ02880 1626 aa26.42■■□□□ 1.82
SLC41A3-220ENST00000514333 SNAPC4Q5SXM2 1469 aa26.42■■□□□ 1.82
SLC41A3-220ENST00000514333 MAGI1Q96QZ7 1491 aaPredicted RBP26.42■■□□□ 1.82
SLC41A3-220ENST00000514333 BIVM-ERCC5R4GMW8 1640 aa26.4■■□□□ 1.82
SLC41A3-220ENST00000514333 SYNJ1O43426 1573 aa26.36■■□□□ 1.81
SLC41A3-220ENST00000514333 RIMBP3CA6NJZ7 1639 aa26.35■■□□□ 1.81
SLC41A3-220ENST00000514333 RIMBP3BA6NNM3 1639 aa26.35■■□□□ 1.81
SLC41A3-220ENST00000514333 RIMBP3Q9UFD9 1639 aa26.35■■□□□ 1.81
SLC41A3-220ENST00000514333 SYNJ2O15056 1496 aa26.33■■□□□ 1.81
SLC41A3-220ENST00000514333 ARHGEF11O15085 1522 aa26.33■■□□□ 1.81
SLC41A3-220ENST00000514333 ABCA5Q8WWZ7 1642 aa26.32■■□□□ 1.8
SLC41A3-220ENST00000514333 PBRM1Q86U86 1689 aa26.29■■□□□ 1.8
SLC41A3-220ENST00000514333 CYB5RLQ6IPT4 315 aa26.21■■□□□ 1.79
SLC41A3-220ENST00000514333 CLASP1Q7Z460 1538 aa26.19■■□□□ 1.78
SLC41A3-220ENST00000514333 ERICH3Q5RHP9 1530 aa26.14■■□□□ 1.77
SLC41A3-220ENST00000514333 FHAD1B1AJZ9 1412 aa26.12■■□□□ 1.77
SLC41A3-220ENST00000514333 GRIN2AQ12879 1464 aa26.1■■□□□ 1.77
SLC41A3-220ENST00000514333 ARAP1Q96P48 1450 aa26.08■■□□□ 1.77
SLC41A3-220ENST00000514333 ADAMTS12P58397 1594 aa26.07■■□□□ 1.76
SLC41A3-220ENST00000514333 NUP160Q12769 1436 aa26.03■■□□□ 1.76
SLC41A3-220ENST00000514333 KIF27Q86VH2 1401 aa25.97■■□□□ 1.75
SLC41A3-220ENST00000514333 IGF1RP08069 1367 aa25.96■■□□□ 1.75
SLC41A3-220ENST00000514333 CEP170Q5SW79 1584 aa25.95■■□□□ 1.75
SLC41A3-220ENST00000514333 JPH4Q96JJ6 628 aa25.86■■□□□ 1.73
SLC41A3-220ENST00000514333 SHROOM2Q13796 1616 aa25.83■■□□□ 1.73
SLC41A3-220ENST00000514333 ERCC6L2Q5T890 1561 aa25.79■■□□□ 1.72
SLC41A3-220ENST00000514333 CUL7Q14999 1698 aa25.78■■□□□ 1.72
SLC41A3-220ENST00000514333 CARMIL1Q5VZK9 1371 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms