RNA–Protein interactions for RNA: ENST00000490554.5

LMNB2-203, Transcript of lamin B2, humanhuman

TSL 2

Gene LMNB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-203ENST00000490554 NISCHQ9Y2I1 1504 aa39.24■■■■□ 3.87
LMNB2-203ENST00000490554 ABCC9O60706 1549 aa35.53■■■■□ 3.28
LMNB2-203ENST00000490554 CCDC180Q9P1Z9 1646 aa35.25■■■■□ 3.23
LMNB2-203ENST00000490554 RB1CC1Q8TDY2 1594 aa33.7■■■□□ 2.99
LMNB2-203ENST00000490554 DNAJC5BQ9UF47 199 aa33.61■■■□□ 2.97
LMNB2-203ENST00000490554 NACADO15069 1562 aa33.43■■■□□ 2.94
LMNB2-203ENST00000490554 DCAF8L2P0C7V8 631 aa33.22■■■□□ 2.91
LMNB2-203ENST00000490554 PABPN1Q86U42 306 aaKnown RBP eCLIP33.08■■■□□ 2.89
LMNB2-203ENST00000490554 MYO15BQ96JP2 1530 aa32.93■■■□□ 2.86
LMNB2-203ENST00000490554 UNC13AQ9UPW8 1703 aa32.86■■■□□ 2.85
LMNB2-203ENST00000490554 BICRAQ9NZM4 1560 aa32.75■■■□□ 2.83
LMNB2-203ENST00000490554 ZCCHC6Q5VYS8 1495 aaKnown RBP32.48■■■□□ 2.79
LMNB2-203ENST00000490554 DCAF1Q9Y4B6 1507 aa32.41■■■□□ 2.78
LMNB2-203ENST00000490554 SHROOM4Q9ULL8 1493 aa32.3■■■□□ 2.76
LMNB2-203ENST00000490554 SCRIBQ14160 1630 aa32.11■■■□□ 2.73
LMNB2-203ENST00000490554 CC2D2AQ9P2K1 1620 aa32.07■■■□□ 2.72
LMNB2-203ENST00000490554 CECR2Q9BXF3 1484 aa32.05■■■□□ 2.72
LMNB2-203ENST00000490554 EIF4G1Q04637 1599 aaKnown RBP31.95■■■□□ 2.71
LMNB2-203ENST00000490554 DNAJC5Q9H3Z4 198 aa31.03■■■□□ 2.56
LMNB2-203ENST00000490554 NCAPD3P42695 1498 aa30.91■■■□□ 2.54
LMNB2-203ENST00000490554 ATAD2BQ9ULI0 1458 aa30.76■■■□□ 2.52
LMNB2-203ENST00000490554 CUX2O14529 1486 aa30.74■■■□□ 2.51
LMNB2-203ENST00000490554 ERCC6Q03468 1493 aa30.69■■■□□ 2.5
LMNB2-203ENST00000490554 SMARCA2P51531 1590 aa30.63■■■□□ 2.49
LMNB2-203ENST00000490554 SMARCA4P51532 1647 aa30.63■■■□□ 2.49
LMNB2-203ENST00000490554 HMGXB3Q12766 1538 aa30.62■■■□□ 2.49
LMNB2-203ENST00000490554 NESP48681 1621 aa30.47■■■□□ 2.47
LMNB2-203ENST00000490554 BAZ1AQ9NRL2 1556 aaPredicted RBP30.45■■■□□ 2.47
LMNB2-203ENST00000490554 BAZ1BQ9UIG0 1483 aaKnown RBP30.44■■■□□ 2.46
LMNB2-203ENST00000490554 PEG3Q9GZU2 1588 aa30.36■■■□□ 2.45
LMNB2-203ENST00000490554 MROH2BQ7Z745 1585 aa30.24■■■□□ 2.43
LMNB2-203ENST00000490554 LAMC3Q9Y6N6 1575 aa30.2■■■□□ 2.42
LMNB2-203ENST00000490554 THOC2Q8NI27 1593 aaKnown RBP30.17■■■□□ 2.42
LMNB2-203ENST00000490554 PDS5BQ9NTI5 1447 aa30.06■■■□□ 2.4
LMNB2-203ENST00000490554 KIF21AQ7Z4S6 1674 aa29.99■■■□□ 2.39
LMNB2-203ENST00000490554 CADPSQ9ULU8 1353 aa29.96■■■□□ 2.39
LMNB2-203ENST00000490554 WIZO95785 1651 aa29.81■■■□□ 2.36
LMNB2-203ENST00000490554 MRC2Q9UBG0 1479 aa29.8■■■□□ 2.36
LMNB2-203ENST00000490554 WDR62O43379 1518 aa29.73■■■□□ 2.35
LMNB2-203ENST00000490554 CEP164Q9UPV0 1460 aa29.63■■■□□ 2.33
LMNB2-203ENST00000490554 FANCD2Q9BXW9 1451 aa29.59■■■□□ 2.33
LMNB2-203ENST00000490554 CFTRP13569 1480 aa29.55■■■□□ 2.32
LMNB2-203ENST00000490554 RSF1Q96T23 1441 aaPredicted RBP29.55■■■□□ 2.32
LMNB2-203ENST00000490554 TRIM41Q8WV44 630 aa29.52■■■□□ 2.32
LMNB2-203ENST00000490554 TOP2AP11388 1531 aaKnown RBP29.45■■■□□ 2.3
LMNB2-203ENST00000490554 URB2Q14146 1524 aaKnown RBP29.36■■■□□ 2.29
LMNB2-203ENST00000490554 OSCARQ8IYS5 282 aa29.32■■■□□ 2.28
LMNB2-203ENST00000490554 CCDC88BA6NC98 1476 aa29.14■■■□□ 2.26
LMNB2-203ENST00000490554 PRDM2Q13029 1718 aa29.1■■■□□ 2.25
LMNB2-203ENST00000490554 IFT140Q96RY7 1462 aa29.07■■■□□ 2.24
LMNB2-203ENST00000490554 ZNF608Q9ULD9 1512 aaPredicted RBP29.04■■■□□ 2.24
LMNB2-203ENST00000490554 TOPBP1Q92547 1522 aa29■■■□□ 2.23
LMNB2-203ENST00000490554 ABCC8Q09428 1581 aa28.92■■■□□ 2.22
LMNB2-203ENST00000490554 RIMBP3CA6NJZ7 1639 aa28.9■■■□□ 2.22
LMNB2-203ENST00000490554 RIMBP3BA6NNM3 1639 aa28.9■■■□□ 2.22
LMNB2-203ENST00000490554 RIMBP3Q9UFD9 1639 aa28.9■■■□□ 2.22
LMNB2-203ENST00000490554 DNMBPQ6XZF7 1577 aa28.85■■■□□ 2.21
LMNB2-203ENST00000490554 EIF4G3O43432 1585 aaKnown RBP28.82■■■□□ 2.2
LMNB2-203ENST00000490554 ARHGEF11O15085 1522 aa28.81■■■□□ 2.2
LMNB2-203ENST00000490554 AQRO60306 1485 aaKnown RBP eCLIP28.76■■■□□ 2.193e-7■■■■■ 34.2
LMNB2-203ENST00000490554 TARBP1Q13395 1621 aaKnown RBP28.74■■■□□ 2.19
LMNB2-203ENST00000490554 POLA1P09884 1462 aaPredicted RBP28.7■■■□□ 2.18
LMNB2-203ENST00000490554 CYB5RLQ6IPT4 315 aa28.64■■■□□ 2.18
LMNB2-203ENST00000490554 CHD1O14646 1710 aa28.61■■■□□ 2.17
LMNB2-203ENST00000490554 RAD54L2Q9Y4B4 1467 aa28.6■■■□□ 2.17
LMNB2-203ENST00000490554 FBLN2P98095 1184 aa28.6■■■□□ 2.17
LMNB2-203ENST00000490554 SOGA1O94964 1423 aa28.57■■■□□ 2.16
LMNB2-203ENST00000490554 TDRD9Q8NDG6 1382 aaKnown RBP28.55■■■□□ 2.16
LMNB2-203ENST00000490554 ARAP1Q96P48 1450 aa28.53■■■□□ 2.16
LMNB2-203ENST00000490554 FGD5Q6ZNL6 1462 aa28.47■■■□□ 2.15
LMNB2-203ENST00000490554 SNAPC4Q5SXM2 1469 aa28.45■■■□□ 2.14
LMNB2-203ENST00000490554 WDR97A6NE52 1622 aa28.43■■■□□ 2.14
LMNB2-203ENST00000490554 CUX1P39880 1505 aa28.41■■■□□ 2.14
LMNB2-203ENST00000490554 TRHP20396 242 aaPredicted RBP28.38■■■□□ 2.13
LMNB2-203ENST00000490554 CHMP7Q8WUX9 453 aaPredicted RBP28.38■■■□□ 2.13
LMNB2-203ENST00000490554 MAGI1Q96QZ7 1491 aaPredicted RBP28.36■■■□□ 2.13
LMNB2-203ENST00000490554 CLASP1Q7Z460 1538 aa28.35■■■□□ 2.13
LMNB2-203ENST00000490554 GRIN2BQ13224 1484 aa28.34■■■□□ 2.13
LMNB2-203ENST00000490554 SYNJ1O43426 1573 aa28.29■■■□□ 2.12
LMNB2-203ENST00000490554 SYNJ2O15056 1496 aa28.27■■■□□ 2.12
LMNB2-203ENST00000490554 GAPVD1Q14C86 1478 aa28.21■■■□□ 2.11
LMNB2-203ENST00000490554 ABCA10Q8WWZ4 1543 aa28.15■■■□□ 2.1
LMNB2-203ENST00000490554 PBRM1Q86U86 1689 aa28.12■■■□□ 2.09
LMNB2-203ENST00000490554 ABCA5Q8WWZ7 1642 aa28.09■■■□□ 2.09
LMNB2-203ENST00000490554 SUPT5HO00267 1087 aaKnown RBP28.04■■■□□ 2.08
LMNB2-203ENST00000490554 WRNQ14191 1432 aaPredicted RBP eCLIP28■■■□□ 2.07
LMNB2-203ENST00000490554 GRIN2AQ12879 1464 aa27.97■■■□□ 2.07
LMNB2-203ENST00000490554 NUP160Q12769 1436 aa27.92■■■□□ 2.06
LMNB2-203ENST00000490554 ADAMTS12P58397 1594 aa27.9■■■□□ 2.06
LMNB2-203ENST00000490554 ERCC6L2Q5T890 1561 aa27.9■■■□□ 2.06
LMNB2-203ENST00000490554 TOP2BQ02880 1626 aa27.88■■■□□ 2.05
LMNB2-203ENST00000490554 CEP170Q5SW79 1584 aa27.86■■■□□ 2.05
LMNB2-203ENST00000490554 BIVM-ERCC5R4GMW8 1640 aa27.85■■■□□ 2.05
LMNB2-203ENST00000490554 FHAD1B1AJZ9 1412 aa27.85■■■□□ 2.05
LMNB2-203ENST00000490554 ERICH3Q5RHP9 1530 aa27.77■■■□□ 2.04
LMNB2-203ENST00000490554 SHROOM2Q13796 1616 aa27.77■■■□□ 2.04
LMNB2-203ENST00000490554 AEBP2Q6ZN18 517 aaPredicted RBP27.71■■■□□ 2.03
LMNB2-203ENST00000490554 PRG4Q92954 1404 aaPredicted RBP27.66■■■□□ 2.02
LMNB2-203ENST00000490554 JPH4Q96JJ6 628 aa27.64■■■□□ 2.02
LMNB2-203ENST00000490554 RUSC2Q8N2Y8 1516 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms