RNA–Protein interactions for RNA: ENST00000507901.5

DDR1-261, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-261ENST00000507901 NISCHQ9Y2I1 1504 aa39.96■■■■□ 3.99
DDR1-261ENST00000507901 CCDC180Q9P1Z9 1646 aa35.51■■■■□ 3.28
DDR1-261ENST00000507901 ABCC9O60706 1549 aa34.48■■■■□ 3.11
DDR1-261ENST00000507901 ZCCHC6Q5VYS8 1495 aaKnown RBP33.34■■■□□ 2.93
DDR1-261ENST00000507901 NACADO15069 1562 aa33.31■■■□□ 2.92
DDR1-261ENST00000507901 RB1CC1Q8TDY2 1594 aa33.29■■■□□ 2.92
DDR1-261ENST00000507901 MYO15BQ96JP2 1530 aa33.23■■■□□ 2.91
DDR1-261ENST00000507901 DCAF1Q9Y4B6 1507 aa33.13■■■□□ 2.89
DDR1-261ENST00000507901 DCAF8L2P0C7V8 631 aa33.02■■■□□ 2.88
DDR1-261ENST00000507901 UNC13AQ9UPW8 1703 aa32.65■■■□□ 2.82
DDR1-261ENST00000507901 BICRAQ9NZM4 1560 aa32.38■■■□□ 2.77
DDR1-261ENST00000507901 SCRIBQ14160 1630 aa32.31■■■□□ 2.76
DDR1-261ENST00000507901 PABPN1Q86U42 306 aaKnown RBP eCLIP32.19■■■□□ 2.74
DDR1-261ENST00000507901 SHROOM4Q9ULL8 1493 aa32.03■■■□□ 2.72
DDR1-261ENST00000507901 DNAJC5BQ9UF47 199 aa31.99■■■□□ 2.71
DDR1-261ENST00000507901 EIF4G1Q04637 1599 aaKnown RBP31.44■■■□□ 2.62
DDR1-261ENST00000507901 CC2D2AQ9P2K1 1620 aa31.27■■■□□ 2.6
DDR1-261ENST00000507901 CECR2Q9BXF3 1484 aa31.1■■■□□ 2.57
DDR1-261ENST00000507901 SMARCA4P51532 1647 aa30.98■■■□□ 2.55
DDR1-261ENST00000507901 BAZ1AQ9NRL2 1556 aaPredicted RBP30.93■■■□□ 2.54
DDR1-261ENST00000507901 MROH2BQ7Z745 1585 aa30.79■■■□□ 2.52
DDR1-261ENST00000507901 ATAD2BQ9ULI0 1458 aa30.77■■■□□ 2.52
DDR1-261ENST00000507901 NCAPD3P42695 1498 aa30.75■■■□□ 2.51
DDR1-261ENST00000507901 PEG3Q9GZU2 1588 aa30.75■■■□□ 2.51
DDR1-261ENST00000507901 SMARCA2P51531 1590 aa30.71■■■□□ 2.51
DDR1-261ENST00000507901 HMGXB3Q12766 1538 aa30.63■■■□□ 2.49
DDR1-261ENST00000507901 RSF1Q96T23 1441 aaPredicted RBP30.47■■■□□ 2.47
DDR1-261ENST00000507901 WIZO95785 1651 aa30.46■■■□□ 2.47
DDR1-261ENST00000507901 BAZ1BQ9UIG0 1483 aaKnown RBP30.45■■■□□ 2.47
DDR1-261ENST00000507901 TOP2AP11388 1531 aaKnown RBP30.15■■■□□ 2.42
DDR1-261ENST00000507901 NESP48681 1621 aa29.93■■■□□ 2.38
DDR1-261ENST00000507901 LAMC3Q9Y6N6 1575 aa29.9■■■□□ 2.38
DDR1-261ENST00000507901 CADPSQ9ULU8 1353 aa29.8■■■□□ 2.36
DDR1-261ENST00000507901 CCDC88BA6NC98 1476 aa29.77■■■□□ 2.36
DDR1-261ENST00000507901 ERCC6Q03468 1493 aa29.73■■■□□ 2.35
DDR1-261ENST00000507901 CFTRP13569 1480 aa29.71■■■□□ 2.35
DDR1-261ENST00000507901 KIF21AQ7Z4S6 1674 aa29.62■■■□□ 2.33
DDR1-261ENST00000507901 PDS5BQ9NTI5 1447 aa29.62■■■□□ 2.33
DDR1-261ENST00000507901 SUPT5HO00267 1087 aaKnown RBP29.57■■■□□ 2.32
DDR1-261ENST00000507901 CUX2O14529 1486 aa29.56■■■□□ 2.32
DDR1-261ENST00000507901 PRDM2Q13029 1718 aa29.54■■■□□ 2.32
DDR1-261ENST00000507901 THOC2Q8NI27 1593 aaKnown RBP29.53■■■□□ 2.32
DDR1-261ENST00000507901 FANCD2Q9BXW9 1451 aa29.45■■■□□ 2.31
DDR1-261ENST00000507901 CEP164Q9UPV0 1460 aa29.39■■■□□ 2.3
DDR1-261ENST00000507901 MRC2Q9UBG0 1479 aa29.35■■■□□ 2.29
DDR1-261ENST00000507901 WDR62O43379 1518 aa29.31■■■□□ 2.28
DDR1-261ENST00000507901 URB2Q14146 1524 aaKnown RBP29.2■■■□□ 2.27
DDR1-261ENST00000507901 DNAJC5Q9H3Z4 198 aa29.16■■■□□ 2.26
DDR1-261ENST00000507901 TOPBP1Q92547 1522 aa29.03■■■□□ 2.24
DDR1-261ENST00000507901 DNMBPQ6XZF7 1577 aa29.01■■■□□ 2.24
DDR1-261ENST00000507901 ABCC8Q09428 1581 aa29■■■□□ 2.23
DDR1-261ENST00000507901 CUX1P39880 1505 aa28.89■■■□□ 2.21
DDR1-261ENST00000507901 POLA1P09884 1462 aaPredicted RBP28.79■■■□□ 2.2
DDR1-261ENST00000507901 IFT140Q96RY7 1462 aa28.78■■■□□ 2.2
DDR1-261ENST00000507901 TARBP1Q13395 1621 aaKnown RBP28.76■■■□□ 2.2
DDR1-261ENST00000507901 FGD5Q6ZNL6 1462 aa28.72■■■□□ 2.19
DDR1-261ENST00000507901 BIVM-ERCC5R4GMW8 1640 aa28.69■■■□□ 2.18
DDR1-261ENST00000507901 TOP2BQ02880 1626 aa28.67■■■□□ 2.18
DDR1-261ENST00000507901 ZNF608Q9ULD9 1512 aaPredicted RBP28.67■■■□□ 2.18
DDR1-261ENST00000507901 WRNQ14191 1432 aaPredicted RBP eCLIP28.67■■■□□ 2.18
DDR1-261ENST00000507901 SYNJ1O43426 1573 aa28.67■■■□□ 2.18
DDR1-261ENST00000507901 RAD54L2Q9Y4B4 1467 aa28.63■■■□□ 2.17
DDR1-261ENST00000507901 SOGA1O94964 1423 aa28.6■■■□□ 2.17
DDR1-261ENST00000507901 WDR97A6NE52 1622 aa28.59■■■□□ 2.17
DDR1-261ENST00000507901 EIF4G3O43432 1585 aaKnown RBP28.58■■■□□ 2.17
DDR1-261ENST00000507901 ABCA10Q8WWZ4 1543 aa28.49■■■□□ 2.15
DDR1-261ENST00000507901 AQRO60306 1485 aaKnown RBP eCLIP28.48■■■□□ 2.152e-7■■■■■ 31.6
DDR1-261ENST00000507901 TDRD9Q8NDG6 1382 aaKnown RBP28.42■■■□□ 2.14
DDR1-261ENST00000507901 ABCA5Q8WWZ7 1642 aa28.4■■■□□ 2.14
DDR1-261ENST00000507901 OSCARQ8IYS5 282 aa28.33■■■□□ 2.13
DDR1-261ENST00000507901 GAPVD1Q14C86 1478 aa28.31■■■□□ 2.12
DDR1-261ENST00000507901 PBRM1Q86U86 1689 aa28.3■■■□□ 2.12
DDR1-261ENST00000507901 GRIN2BQ13224 1484 aa28.29■■■□□ 2.12
DDR1-261ENST00000507901 SNAPC4Q5SXM2 1469 aa28.23■■■□□ 2.11
DDR1-261ENST00000507901 MAGI1Q96QZ7 1491 aaPredicted RBP28.22■■■□□ 2.11
DDR1-261ENST00000507901 CHD1O14646 1710 aa28.2■■■□□ 2.1
DDR1-261ENST00000507901 ERICH3Q5RHP9 1530 aa28.14■■■□□ 2.1
DDR1-261ENST00000507901 SYNJ2O15056 1496 aa28.1■■■□□ 2.09
DDR1-261ENST00000507901 ADAMTS12P58397 1594 aa28.1■■■□□ 2.09
DDR1-261ENST00000507901 KIF27Q86VH2 1401 aa28.03■■■□□ 2.08
DDR1-261ENST00000507901 TRIM41Q8WV44 630 aa28■■■□□ 2.07
DDR1-261ENST00000507901 FHAD1B1AJZ9 1412 aa27.99■■■□□ 2.07
DDR1-261ENST00000507901 IGF1RP08069 1367 aa27.97■■■□□ 2.07
DDR1-261ENST00000507901 FBLN2P98095 1184 aa27.95■■■□□ 2.06
DDR1-261ENST00000507901 GRIN2AQ12879 1464 aa27.95■■■□□ 2.06
DDR1-261ENST00000507901 CLASP1Q7Z460 1538 aa27.94■■■□□ 2.06
DDR1-261ENST00000507901 CHMP7Q8WUX9 453 aaPredicted RBP27.94■■■□□ 2.06
DDR1-261ENST00000507901 CUL7Q14999 1698 aa27.91■■■□□ 2.06
DDR1-261ENST00000507901 RUSC2Q8N2Y8 1516 aa27.88■■■□□ 2.05
DDR1-261ENST00000507901 NUP160Q12769 1436 aa27.87■■■□□ 2.05
DDR1-261ENST00000507901 CEP170Q5SW79 1584 aa27.84■■■□□ 2.05
DDR1-261ENST00000507901 CHIC1Q5VXU3 224 aa27.79■■■□□ 2.04
DDR1-261ENST00000507901 RIMBP3CA6NJZ7 1639 aa27.78■■■□□ 2.04
DDR1-261ENST00000507901 RIMBP3BA6NNM3 1639 aa27.78■■■□□ 2.04
DDR1-261ENST00000507901 RIMBP3Q9UFD9 1639 aa27.78■■■□□ 2.04
DDR1-261ENST00000507901 ARHGEF11O15085 1522 aa27.77■■■□□ 2.04
DDR1-261ENST00000507901 CARMIL1Q5VZK9 1371 aa27.74■■■□□ 2.03
DDR1-261ENST00000507901 SHROOM2Q13796 1616 aa27.68■■■□□ 2.02
DDR1-261ENST00000507901 PRXQ9BXM0 1461 aa27.63■■■□□ 2.01
DDR1-261ENST00000507901 RAPGEF2Q9Y4G8 1499 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms