RNA–Protein interactions for RNA: ENST00000264560.11

PALM-201, Transcript of paralemmin, humanhuman

APPRIS ALT2 TSL 4 BASIC

Gene PALM, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALM-201ENST00000264560 NISCHQ9Y2I1 1504 aa36.68■■■■□ 3.46
PALM-201ENST00000264560 CCDC180Q9P1Z9 1646 aa31.32■■■□□ 2.6
PALM-201ENST00000264560 SHROOM4Q9ULL8 1493 aa31.19■■■□□ 2.58
PALM-201ENST00000264560 DCAF8L2P0C7V8 631 aa31.1■■■□□ 2.57
PALM-201ENST00000264560 ZCCHC6Q5VYS8 1495 aaKnown RBP30.85■■■□□ 2.53
PALM-201ENST00000264560 SUPT5HO00267 1087 aaKnown RBP30.22■■■□□ 2.43
PALM-201ENST00000264560 ABCC9O60706 1549 aa30.05■■■□□ 2.4
PALM-201ENST00000264560 DCAF1Q9Y4B6 1507 aa29.88■■■□□ 2.37
PALM-201ENST00000264560 SCRIBQ14160 1630 aa29.57■■■□□ 2.32
PALM-201ENST00000264560 PELP1Q8IZL8 1130 aaKnown RBP29.52■■■□□ 2.32
PALM-201ENST00000264560 MYO15BQ96JP2 1530 aa29.23■■■□□ 2.27
PALM-201ENST00000264560 NACADO15069 1562 aa29.19■■■□□ 2.26
PALM-201ENST00000264560 RB1CC1Q8TDY2 1594 aa28.93■■■□□ 2.22
PALM-201ENST00000264560 CHIC1Q5VXU3 224 aa28.84■■■□□ 2.21
PALM-201ENST00000264560 RSF1Q96T23 1441 aaPredicted RBP28.83■■■□□ 2.21
PALM-201ENST00000264560 CECR2Q9BXF3 1484 aa28.83■■■□□ 2.21
PALM-201ENST00000264560 HRCP23327 699 aa28.81■■■□□ 2.2
PALM-201ENST00000264560 MYT1Q01538 1121 aa28.72■■■□□ 2.19
PALM-201ENST00000264560 PABPN1Q86U42 306 aaKnown RBP eCLIP28.72■■■□□ 2.19
PALM-201ENST00000264560 MROH2BQ7Z745 1585 aa28.59■■■□□ 2.17
PALM-201ENST00000264560 UNC13AQ9UPW8 1703 aa28.51■■■□□ 2.15
PALM-201ENST00000264560 WIZO95785 1651 aa28.4■■■□□ 2.14
PALM-201ENST00000264560 BICRAQ9NZM4 1560 aa28.23■■■□□ 2.11
PALM-201ENST00000264560 PPARGC1BQ86YN6 1023 aaKnown RBP28.19■■■□□ 2.1
PALM-201ENST00000264560 BAZ1AQ9NRL2 1556 aaPredicted RBP28.19■■■□□ 2.1
PALM-201ENST00000264560 LOC105371045A0A1W2PR82 267 aa28.15■■■□□ 2.1
PALM-201ENST00000264560 SMARCA4P51532 1647 aa28.07■■■□□ 2.08
PALM-201ENST00000264560 TRIM41Q8WV44 630 aa28.06■■■□□ 2.08
PALM-201ENST00000264560 FAM9AQ8IZU1 332 aaPredicted RBP28.03■■■□□ 2.08
PALM-201ENST00000264560 EHMT2Q96KQ7 1210 aa28■■■□□ 2.07
PALM-201ENST00000264560 SCAF1Q9H7N4 1312 aaKnown RBP27.91■■■□□ 2.06
PALM-201ENST00000264560 TOP2AP11388 1531 aaKnown RBP27.8■■■□□ 2.04
PALM-201ENST00000264560 CCDC88BA6NC98 1476 aa27.79■■■□□ 2.04
PALM-201ENST00000264560 SMARCA2P51531 1590 aa27.68■■■□□ 2.02
PALM-201ENST00000264560 PCGF6Q9BYE7 350 aa27.68■■■□□ 2.02
PALM-201ENST00000264560 ABCC8Q09428 1581 aa27.6■■■□□ 2.01
PALM-201ENST00000264560 ATAD2BQ9ULI0 1458 aa27.57■■■□□ 2
PALM-201ENST00000264560 EIF4G1Q04637 1599 aaKnown RBP27.52■■■□□ 2
PALM-201ENST00000264560 BAZ1BQ9UIG0 1483 aaKnown RBP27.49■■□□□ 1.99
PALM-201ENST00000264560 PEG3Q9GZU2 1588 aa27.43■■□□□ 1.98
PALM-201ENST00000264560 TTBK1Q5TCY1 1321 aaPredicted RBP27.28■■□□□ 1.96
PALM-201ENST00000264560 SOGA1O94964 1423 aa27.2■■□□□ 1.95
PALM-201ENST00000264560 RUSC2Q8N2Y8 1516 aa27.14■■□□□ 1.93
PALM-201ENST00000264560 WRNQ14191 1432 aaPredicted RBP eCLIP27.11■■□□□ 1.93
PALM-201ENST00000264560 NCAPD3P42695 1498 aa27.08■■□□□ 1.93
PALM-201ENST00000264560 SYNJ1O43426 1573 aa27.01■■□□□ 1.91
PALM-201ENST00000264560 HMGXB3Q12766 1538 aa26.96■■□□□ 1.91
PALM-201ENST00000264560 CSRNP3Q8WYN3 585 aa26.92■■□□□ 1.9
PALM-201ENST00000264560 CC2D2AQ9P2K1 1620 aa26.9■■□□□ 1.9
PALM-201ENST00000264560 UBTFP17480 764 aaKnown RBP26.89■■□□□ 1.9
PALM-201ENST00000264560 ACIN1Q9UKV3 1341 aaKnown RBP26.86■■□□□ 1.89
PALM-201ENST00000264560 RANGAP1P46060 587 aaPredicted RBP26.81■■□□□ 1.88
PALM-201ENST00000264560 TRIM26Q12899 539 aaPredicted RBP26.79■■□□□ 1.88
PALM-201ENST00000264560 DNAJC5BQ9UF47 199 aa26.79■■□□□ 1.88
PALM-201ENST00000264560 BCL11AQ9H165 835 aa26.76■■□□□ 1.87
PALM-201ENST00000264560 NEUROD1Q13562 356 aa26.74■■□□□ 1.87
PALM-201ENST00000264560 GTF3C3Q9Y5Q9 886 aa26.73■■□□□ 1.87
PALM-201ENST00000264560 CFTRP13569 1480 aa26.71■■□□□ 1.87
PALM-201ENST00000264560 CEP162Q5TB80 1403 aa26.66■■□□□ 1.86
PALM-201ENST00000264560 CUX1P39880 1505 aa26.63■■□□□ 1.85
PALM-201ENST00000264560 EEA1Q15075 1411 aa26.62■■□□□ 1.85
PALM-201ENST00000264560 TOP2BQ02880 1626 aa26.62■■□□□ 1.85
PALM-201ENST00000264560 ZEB1P37275 1124 aaPredicted RBP26.61■■□□□ 1.85
PALM-201ENST00000264560 CADPSQ9ULU8 1353 aa26.61■■□□□ 1.85
PALM-201ENST00000264560 PRKCSHP14314 528 aaPredicted RBP26.6■■□□□ 1.85
PALM-201ENST00000264560 NESP48681 1621 aa26.56■■□□□ 1.84
PALM-201ENST00000264560 TNIKQ9UKE5 1360 aa26.56■■□□□ 1.84
PALM-201ENST00000264560 GOLGA3Q08378 1498 aa26.55■■□□□ 1.84
PALM-201ENST00000264560 RAPGEF2Q9Y4G8 1499 aa26.53■■□□□ 1.84
PALM-201ENST00000264560 CENPBP07199 599 aaPredicted RBP26.52■■□□□ 1.84
PALM-201ENST00000264560 BIVM-ERCC5R4GMW8 1640 aa26.48■■□□□ 1.83
PALM-201ENST00000264560 CEP164Q9UPV0 1460 aa26.46■■□□□ 1.83
PALM-201ENST00000264560 FANCD2Q9BXW9 1451 aa26.37■■□□□ 1.81
PALM-201ENST00000264560 KIF21BO75037 1637 aa26.33■■□□□ 1.81
PALM-201ENST00000264560 CLIP1P30622 1438 aa26.31■■□□□ 1.8
PALM-201ENST00000264560 KIF27Q86VH2 1401 aa26.3■■□□□ 1.8
PALM-201ENST00000264560 CUX2O14529 1486 aa26.3■■□□□ 1.8
PALM-201ENST00000264560 FGD5Q6ZNL6 1462 aa26.29■■□□□ 1.8
PALM-201ENST00000264560 PRDM2Q13029 1718 aa26.26■■□□□ 1.79
PALM-201ENST00000264560 RAD54L2Q9Y4B4 1467 aa26.22■■□□□ 1.79
PALM-201ENST00000264560 PRXQ9BXM0 1461 aa26.21■■□□□ 1.79
PALM-201ENST00000264560 IGF1RP08069 1367 aa26.14■■□□□ 1.77
PALM-201ENST00000264560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.12■■□□□ 1.77
PALM-201ENST00000264560 TOPBP1Q92547 1522 aa26.1■■□□□ 1.77
PALM-201ENST00000264560 POLA1P09884 1462 aaPredicted RBP26.07■■□□□ 1.76
PALM-201ENST00000264560 URB2Q14146 1524 aaKnown RBP26.04■■□□□ 1.76
PALM-201ENST00000264560 VPS8Q8N3P4 1428 aa26.03■■□□□ 1.76
PALM-201ENST00000264560 CARMIL1Q5VZK9 1371 aa26.02■■□□□ 1.76
PALM-201ENST00000264560 ERICH3Q5RHP9 1530 aa26.02■■□□□ 1.76
PALM-201ENST00000264560 APLP2Q06481 763 aa26.02■■□□□ 1.76
PALM-201ENST00000264560 DNMBPQ6XZF7 1577 aa26.01■■□□□ 1.75
PALM-201ENST00000264560 LAMC3Q9Y6N6 1575 aa26■■□□□ 1.75
PALM-201ENST00000264560 TDRD9Q8NDG6 1382 aaKnown RBP26■■□□□ 1.75
PALM-201ENST00000264560 P3H3Q8IVL6 736 aa25.99■■□□□ 1.75
PALM-201ENST00000264560 ANP32EQ9BTT0 268 aa25.98■■□□□ 1.75
PALM-201ENST00000264560 ARAP1Q96P48 1450 aa25.95■■□□□ 1.75
PALM-201ENST00000264560 PDS5BQ9NTI5 1447 aa25.95■■□□□ 1.75
PALM-201ENST00000264560 ERICH6Q7L0X2 663 aa25.95■■□□□ 1.74
PALM-201ENST00000264560 HNRNPUL2Q1KMD3 747 aaKnown RBP25.94■■□□□ 1.74
PALM-201ENST00000264560 KIF21AQ7Z4S6 1674 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms