RNA–Protein interactions for RNA: ENST00000489171.5

RASSF4-211, Transcript of Ras association domain family member 4, humanhuman

TSL 1 (best)

Gene RASSF4, Length 4,350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASSF4-211ENST00000489171 DCAF8L2P0C7V8 631 aa32.85■■■□□ 2.85
RASSF4-211ENST00000489171 SUPT5HO00267 1087 aaKnown RBP31.68■■■□□ 2.66
RASSF4-211ENST00000489171 SHROOM4Q9ULL8 1493 aa30.9■■■□□ 2.54
RASSF4-211ENST00000489171 NISCHQ9Y2I1 1504 aa30.89■■■□□ 2.54
RASSF4-211ENST00000489171 EHMT2Q96KQ7 1210 aa30.7■■■□□ 2.51
RASSF4-211ENST00000489171 PCGF6Q9BYE7 350 aa30.01■■■□□ 2.4
RASSF4-211ENST00000489171 PELP1Q8IZL8 1130 aaKnown RBP29.91■■■□□ 2.38
RASSF4-211ENST00000489171 FAM9AQ8IZU1 332 aaPredicted RBP29.91■■■□□ 2.38
RASSF4-211ENST00000489171 APLP2Q06481 763 aa29.73■■■□□ 2.35
RASSF4-211ENST00000489171 TTBK1Q5TCY1 1321 aaPredicted RBP29.69■■■□□ 2.34
RASSF4-211ENST00000489171 CENPBP07199 599 aaPredicted RBP29.22■■■□□ 2.27
RASSF4-211ENST00000489171 CCER1Q8TC90 406 aaPredicted RBP29.19■■■□□ 2.26
RASSF4-211ENST00000489171 RANGAP1P46060 587 aaPredicted RBP29.15■■■□□ 2.26
RASSF4-211ENST00000489171 TRIM41Q8WV44 630 aa29.15■■■□□ 2.26
RASSF4-211ENST00000489171 ZEB1P37275 1124 aaPredicted RBP29.13■■■□□ 2.25
RASSF4-211ENST00000489171 UBTFP17480 764 aaKnown RBP28.78■■■□□ 2.2
RASSF4-211ENST00000489171 ERICH6Q7L0X2 663 aa28.77■■■□□ 2.2
RASSF4-211ENST00000489171 YTHDC1Q96MU7 727 aaKnown RBP28.76■■■□□ 2.19
RASSF4-211ENST00000489171 PPARGC1BQ86YN6 1023 aaKnown RBP28.75■■■□□ 2.19
RASSF4-211ENST00000489171 ATP1B4Q9UN42 357 aaPredicted RBP28.7■■■□□ 2.18
RASSF4-211ENST00000489171 HRCP23327 699 aa28.5■■■□□ 2.15
RASSF4-211ENST00000489171 TRIM26Q12899 539 aaPredicted RBP28.47■■■□□ 2.15
RASSF4-211ENST00000489171 NEFLP07196 543 aa28.44■■■□□ 2.14
RASSF4-211ENST00000489171 LOC105371045A0A1W2PR82 267 aa28.36■■■□□ 2.13
RASSF4-211ENST00000489171 CHIC1Q5VXU3 224 aa28.2■■■□□ 2.11
RASSF4-211ENST00000489171 MYT1Q01538 1121 aa28.17■■■□□ 2.1
RASSF4-211ENST00000489171 ITGAEP38570 1179 aa28.03■■■□□ 2.08
RASSF4-211ENST00000489171 HNRNPUL2Q1KMD3 747 aaKnown RBP27.96■■■□□ 2.07
RASSF4-211ENST00000489171 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.8■■■□□ 2.04
RASSF4-211ENST00000489171 POLR3GLQ9BT43 218 aa27.74■■■□□ 2.03
RASSF4-211ENST00000489171 CNGB1Q14028 1251 aaPredicted RBP27.69■■■□□ 2.02
RASSF4-211ENST00000489171 DIEXFQ68CQ4 756 aaKnown RBP27.66■■■□□ 2.02
RASSF4-211ENST00000489171 DAXXQ9UER7 740 aaPredicted RBP27.5■■□□□ 1.99
RASSF4-211ENST00000489171 GTF3C3Q9Y5Q9 886 aa27.3■■□□□ 1.96
RASSF4-211ENST00000489171 MYT1LQ9UL68 1186 aa27.29■■□□□ 1.96
RASSF4-211ENST00000489171 BCANQ96GW7 911 aa27.15■■□□□ 1.94
RASSF4-211ENST00000489171 FAM50AQ14320 339 aaKnown RBP27.12■■□□□ 1.93
RASSF4-211ENST00000489171 NEUROD1Q13562 356 aa27.09■■□□□ 1.93
RASSF4-211ENST00000489171 RTL5Q5HYW3 569 aaPredicted RBP27.06■■□□□ 1.92
RASSF4-211ENST00000489171 CLSPNQ9HAW4 1339 aa27■■□□□ 1.91
RASSF4-211ENST00000489171 SLC4A1APQ9BWU0 796 aaKnown RBP26.95■■□□□ 1.91
RASSF4-211ENST00000489171 TRIM52Q96A61 297 aa26.93■■□□□ 1.9
RASSF4-211ENST00000489171 ZNF316A6NFI3 1004 aaPredicted RBP26.91■■□□□ 1.9
RASSF4-211ENST00000489171 ACIN1Q9UKV3 1341 aaKnown RBP26.84■■□□□ 1.89
RASSF4-211ENST00000489171 ANP32CO43423 234 aa26.82■■□□□ 1.88
RASSF4-211ENST00000489171 PABPN1Q86U42 306 aaKnown RBP eCLIP26.77■■□□□ 1.884e-6■■■■□ 23.2
RASSF4-211ENST00000489171 ZNF326Q5BKZ1 582 aaKnown RBP26.75■■□□□ 1.87
RASSF4-211ENST00000489171 CDK11AQ9UQ88 783 aaPredicted RBP26.71■■□□□ 1.87
RASSF4-211ENST00000489171 CSRNP3Q8WYN3 585 aa26.57■■□□□ 1.84
RASSF4-211ENST00000489171 P3H3Q8IVL6 736 aa26.49■■□□□ 1.83
RASSF4-211ENST00000489171 ABCC9O60706 1549 aa26.48■■□□□ 1.83
RASSF4-211ENST00000489171 ARID3CA6NKF2 412 aa26.36■■□□□ 1.81
RASSF4-211ENST00000489171 FKBP8Q14318 412 aa26.34■■□□□ 1.81
RASSF4-211ENST00000489171 BCL11AQ9H165 835 aa26.33■■□□□ 1.81
RASSF4-211ENST00000489171 FBLN2P98095 1184 aa26.28■■□□□ 1.8
RASSF4-211ENST00000489171 DDX10Q13206 875 aaKnown RBP26.25■■□□□ 1.79
RASSF4-211ENST00000489171 ANP32AP39687 249 aaKnown RBP26.23■■□□□ 1.79
RASSF4-211ENST00000489171 NPM2Q86SE8 214 aaKnown RBP26.23■■□□□ 1.79
RASSF4-211ENST00000489171 CANXP27824 592 aaKnown RBP26.21■■□□□ 1.79
RASSF4-211ENST00000489171 ZBTB47Q9UFB7 747 aaPredicted RBP26.21■■□□□ 1.79
RASSF4-211ENST00000489171 HNRNPUQ00839 825 aaKnown RBP eCLIP26.19■■□□□ 1.78
RASSF4-211ENST00000489171 SCAF1Q9H7N4 1312 aaKnown RBP26.13■■□□□ 1.77
RASSF4-211ENST00000489171 ZNF777Q9ULD5 760 aaPredicted RBP26.11■■□□□ 1.77
RASSF4-211ENST00000489171 FAM9BQ8IZU0 186 aa26.08■■□□□ 1.77
RASSF4-211ENST00000489171 DCAF1Q9Y4B6 1507 aa26.07■■□□□ 1.76
RASSF4-211ENST00000489171 TONSLQ96HA7 1378 aa26.05■■□□□ 1.76
RASSF4-211ENST00000489171 MIER1Q8N108 512 aa26.03■■□□□ 1.76
RASSF4-211ENST00000489171 SALL2Q9Y467 1007 aaPredicted RBP26.02■■□□□ 1.76
RASSF4-211ENST00000489171 SLC24A1O60721 1099 aa26■■□□□ 1.75
RASSF4-211ENST00000489171 EIF5BO60841 1220 aaKnown RBP25.95■■□□□ 1.74
RASSF4-211ENST00000489171 NEFMP07197 916 aa25.94■■□□□ 1.74
RASSF4-211ENST00000489171 HIRIP3Q9BW71 556 aaPredicted RBP25.9■■□□□ 1.74
RASSF4-211ENST00000489171 CCDC136Q96JN2 1154 aa25.86■■□□□ 1.73
RASSF4-211ENST00000489171 CHIC2Q9UKJ5 165 aa25.85■■□□□ 1.73
RASSF4-211ENST00000489171 IRX6P78412 446 aaPredicted RBP25.83■■□□□ 1.73
RASSF4-211ENST00000489171 NBR1Q14596 966 aa25.82■■□□□ 1.72
RASSF4-211ENST00000489171 TMC1Q8TDI8 760 aa25.81■■□□□ 1.72
RASSF4-211ENST00000489171 MRS2Q9HD23 443 aa25.78■■□□□ 1.72
RASSF4-211ENST00000489171 HSP90AA1P07900 732 aaKnown RBP25.73■■□□□ 1.71
RASSF4-211ENST00000489171 CHGAP10645 457 aaKnown RBP25.7■■□□□ 1.7
RASSF4-211ENST00000489171 UPF2Q9HAU5 1272 aaKnown RBP25.67■■□□□ 1.7
RASSF4-211ENST00000489171 KDM2AQ9Y2K7 1162 aa25.62■■□□□ 1.69
RASSF4-211ENST00000489171 MYO15BQ96JP2 1530 aa25.61■■□□□ 1.69
RASSF4-211ENST00000489171 SCRIBQ14160 1630 aa25.6■■□□□ 1.69
RASSF4-211ENST00000489171 ANP32BQ92688 251 aaKnown RBP25.6■■□□□ 1.69
RASSF4-211ENST00000489171 ARXQ96QS3 562 aa25.59■■□□□ 1.69
RASSF4-211ENST00000489171 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.57■■□□□ 1.681e-6■■□□□ 11.7
RASSF4-211ENST00000489171 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.54■■□□□ 1.68
RASSF4-211ENST00000489171 SENP3-EIF4A1A0A087X0R7 540 aa25.52■■□□□ 1.68
RASSF4-211ENST00000489171 ZCCHC6Q5VYS8 1495 aaKnown RBP25.51■■□□□ 1.67
RASSF4-211ENST00000489171 CLIP1P30622 1438 aa25.51■■□□□ 1.67
RASSF4-211ENST00000489171 EIF4G2P78344 907 aaKnown RBP eCLIP25.51■■□□□ 1.67
RASSF4-211ENST00000489171 MTUS2Q5JR59 1369 aa25.48■■□□□ 1.67
RASSF4-211ENST00000489171 WDR43Q15061 677 aaKnown RBP eCLIP25.47■■□□□ 1.67
RASSF4-211ENST00000489171 TSPY4P0CV99 314 aa25.46■■□□□ 1.67
RASSF4-211ENST00000489171 TSPY10P0CW01 314 aa25.46■■□□□ 1.67
RASSF4-211ENST00000489171 RRP7BPQ9NSQ0 103 aa25.46■■□□□ 1.67
RASSF4-211ENST00000489171 STAG3Q9UJ98 1225 aa25.42■■□□□ 1.66
RASSF4-211ENST00000489171 SUPT16HQ9Y5B9 1047 aaKnown RBP25.39■■□□□ 1.65
RASSF4-211ENST00000489171 ESF1Q9H501 851 aaKnown RBP25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 943.7 ms