RNA–Protein interactions for RNA: ENST00000437124.6

DDR1-237, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-237ENST00000437124 NISCHQ9Y2I1 1504 aa38.13■■■■□ 3.69
DDR1-237ENST00000437124 ABCC9O60706 1549 aa34.88■■■■□ 3.17
DDR1-237ENST00000437124 CCDC180Q9P1Z9 1646 aa34.46■■■■□ 3.11
DDR1-237ENST00000437124 DNAJC5BQ9UF47 199 aa33.21■■■□□ 2.91
DDR1-237ENST00000437124 RB1CC1Q8TDY2 1594 aa33.04■■■□□ 2.88
DDR1-237ENST00000437124 NACADO15069 1562 aa32.72■■■□□ 2.83
DDR1-237ENST00000437124 PABPN1Q86U42 306 aaKnown RBP eCLIP32.37■■■□□ 2.77
DDR1-237ENST00000437124 DCAF8L2P0C7V8 631 aa32.27■■■□□ 2.76
DDR1-237ENST00000437124 UNC13AQ9UPW8 1703 aa32.22■■■□□ 2.75
DDR1-237ENST00000437124 MYO15BQ96JP2 1530 aa32.17■■■□□ 2.74
DDR1-237ENST00000437124 BICRAQ9NZM4 1560 aa32.1■■■□□ 2.73
DDR1-237ENST00000437124 SHROOM4Q9ULL8 1493 aa31.72■■■□□ 2.67
DDR1-237ENST00000437124 DCAF1Q9Y4B6 1507 aa31.54■■■□□ 2.64
DDR1-237ENST00000437124 CECR2Q9BXF3 1484 aa31.52■■■□□ 2.64
DDR1-237ENST00000437124 CC2D2AQ9P2K1 1620 aa31.51■■■□□ 2.63
DDR1-237ENST00000437124 ZCCHC6Q5VYS8 1495 aaKnown RBP31.5■■■□□ 2.63
DDR1-237ENST00000437124 EIF4G1Q04637 1599 aaKnown RBP31.34■■■□□ 2.61
DDR1-237ENST00000437124 SCRIBQ14160 1630 aa31.27■■■□□ 2.6
DDR1-237ENST00000437124 DNAJC5Q9H3Z4 198 aa30.94■■■□□ 2.54
DDR1-237ENST00000437124 CUX2O14529 1486 aa30.37■■■□□ 2.45
DDR1-237ENST00000437124 NCAPD3P42695 1498 aa30.24■■■□□ 2.43
DDR1-237ENST00000437124 ERCC6Q03468 1493 aa30.17■■■□□ 2.42
DDR1-237ENST00000437124 ATAD2BQ9ULI0 1458 aa30.02■■■□□ 2.4
DDR1-237ENST00000437124 HMGXB3Q12766 1538 aa29.94■■■□□ 2.38
DDR1-237ENST00000437124 SMARCA2P51531 1590 aa29.92■■■□□ 2.38
DDR1-237ENST00000437124 SMARCA4P51532 1647 aa29.84■■■□□ 2.37
DDR1-237ENST00000437124 NESP48681 1621 aa29.82■■■□□ 2.36
DDR1-237ENST00000437124 BAZ1BQ9UIG0 1483 aaKnown RBP29.68■■■□□ 2.34
DDR1-237ENST00000437124 THOC2Q8NI27 1593 aaKnown RBP29.67■■■□□ 2.34
DDR1-237ENST00000437124 BAZ1AQ9NRL2 1556 aaPredicted RBP29.64■■■□□ 2.34
DDR1-237ENST00000437124 PEG3Q9GZU2 1588 aa29.63■■■□□ 2.33
DDR1-237ENST00000437124 LAMC3Q9Y6N6 1575 aa29.6■■■□□ 2.33
DDR1-237ENST00000437124 PDS5BQ9NTI5 1447 aa29.45■■■□□ 2.3
DDR1-237ENST00000437124 KIF21AQ7Z4S6 1674 aa29.4■■■□□ 2.3
DDR1-237ENST00000437124 MROH2BQ7Z745 1585 aa29.34■■■□□ 2.29
DDR1-237ENST00000437124 CADPSQ9ULU8 1353 aa29.26■■■□□ 2.27
DDR1-237ENST00000437124 TRIM41Q8WV44 630 aa29.23■■■□□ 2.27
DDR1-237ENST00000437124 MRC2Q9UBG0 1479 aa29.21■■■□□ 2.27
DDR1-237ENST00000437124 WDR62O43379 1518 aa29.17■■■□□ 2.26
DDR1-237ENST00000437124 CEP164Q9UPV0 1460 aa28.97■■■□□ 2.23
DDR1-237ENST00000437124 WIZO95785 1651 aa28.93■■■□□ 2.22
DDR1-237ENST00000437124 FANCD2Q9BXW9 1451 aa28.9■■■□□ 2.22
DDR1-237ENST00000437124 OSCARQ8IYS5 282 aa28.86■■■□□ 2.21
DDR1-237ENST00000437124 CFTRP13569 1480 aa28.83■■■□□ 2.21
DDR1-237ENST00000437124 URB2Q14146 1524 aaKnown RBP28.69■■■□□ 2.18
DDR1-237ENST00000437124 TOP2AP11388 1531 aaKnown RBP28.59■■■□□ 2.17
DDR1-237ENST00000437124 RSF1Q96T23 1441 aaPredicted RBP28.57■■■□□ 2.16
DDR1-237ENST00000437124 RIMBP3CA6NJZ7 1639 aa28.51■■■□□ 2.15
DDR1-237ENST00000437124 RIMBP3BA6NNM3 1639 aa28.51■■■□□ 2.15
DDR1-237ENST00000437124 RIMBP3Q9UFD9 1639 aa28.51■■■□□ 2.15
DDR1-237ENST00000437124 IFT140Q96RY7 1462 aa28.44■■■□□ 2.14
DDR1-237ENST00000437124 PRDM2Q13029 1718 aa28.42■■■□□ 2.14
DDR1-237ENST00000437124 ZNF608Q9ULD9 1512 aaPredicted RBP28.4■■■□□ 2.14
DDR1-237ENST00000437124 ARHGEF11O15085 1522 aa28.39■■■□□ 2.14
DDR1-237ENST00000437124 TOPBP1Q92547 1522 aa28.29■■■□□ 2.12
DDR1-237ENST00000437124 CCDC88BA6NC98 1476 aa28.26■■■□□ 2.11
DDR1-237ENST00000437124 ABCC8Q09428 1581 aa28.25■■■□□ 2.11
DDR1-237ENST00000437124 EIF4G3O43432 1585 aaKnown RBP28.23■■■□□ 2.11
DDR1-237ENST00000437124 CYB5RLQ6IPT4 315 aa28.17■■■□□ 2.1
DDR1-237ENST00000437124 DNMBPQ6XZF7 1577 aa28.15■■■□□ 2.1
DDR1-237ENST00000437124 TARBP1Q13395 1621 aaKnown RBP28.09■■■□□ 2.09
DDR1-237ENST00000437124 AQRO60306 1485 aaKnown RBP eCLIP28.08■■■□□ 2.092e-7■■■■■ 31.6
DDR1-237ENST00000437124 CHD1O14646 1710 aa28.07■■■□□ 2.08
DDR1-237ENST00000437124 ARAP1Q96P48 1450 aa28.07■■■□□ 2.08
DDR1-237ENST00000437124 TRHP20396 242 aaPredicted RBP28■■■□□ 2.07
DDR1-237ENST00000437124 POLA1P09884 1462 aaPredicted RBP27.97■■■□□ 2.07
DDR1-237ENST00000437124 FBLN2P98095 1184 aa27.94■■■□□ 2.06
DDR1-237ENST00000437124 RAD54L2Q9Y4B4 1467 aa27.84■■■□□ 2.05
DDR1-237ENST00000437124 WDR97A6NE52 1622 aa27.83■■■□□ 2.05
DDR1-237ENST00000437124 SOGA1O94964 1423 aa27.83■■■□□ 2.05
DDR1-237ENST00000437124 TDRD9Q8NDG6 1382 aaKnown RBP27.82■■■□□ 2.04
DDR1-237ENST00000437124 CLASP1Q7Z460 1538 aa27.82■■■□□ 2.04
DDR1-237ENST00000437124 SNAPC4Q5SXM2 1469 aa27.77■■■□□ 2.04
DDR1-237ENST00000437124 MAGI1Q96QZ7 1491 aaPredicted RBP27.74■■■□□ 2.03
DDR1-237ENST00000437124 SYNJ1O43426 1573 aa27.73■■■□□ 2.03
DDR1-237ENST00000437124 FGD5Q6ZNL6 1462 aa27.7■■■□□ 2.03
DDR1-237ENST00000437124 CHMP7Q8WUX9 453 aaPredicted RBP27.7■■■□□ 2.02
DDR1-237ENST00000437124 GRIN2BQ13224 1484 aa27.66■■■□□ 2.02
DDR1-237ENST00000437124 SYNJ2O15056 1496 aa27.64■■■□□ 2.02
DDR1-237ENST00000437124 CUX1P39880 1505 aa27.6■■■□□ 2.01
DDR1-237ENST00000437124 AEBP2Q6ZN18 517 aaPredicted RBP27.57■■■□□ 2
DDR1-237ENST00000437124 GAPVD1Q14C86 1478 aa27.54■■■□□ 2
DDR1-237ENST00000437124 PBRM1Q86U86 1689 aa27.46■■□□□ 1.99
DDR1-237ENST00000437124 ABCA10Q8WWZ4 1543 aa27.4■■□□□ 1.98
DDR1-237ENST00000437124 ABCA5Q8WWZ7 1642 aa27.39■■□□□ 1.98
DDR1-237ENST00000437124 GRIN2AQ12879 1464 aa27.31■■□□□ 1.96
DDR1-237ENST00000437124 ERCC6L2Q5T890 1561 aa27.29■■□□□ 1.96
DDR1-237ENST00000437124 NUP160Q12769 1436 aa27.26■■□□□ 1.95
DDR1-237ENST00000437124 CEP170Q5SW79 1584 aa27.23■■□□□ 1.95
DDR1-237ENST00000437124 SUPT5HO00267 1087 aaKnown RBP27.21■■□□□ 1.95
DDR1-237ENST00000437124 ADAMTS12P58397 1594 aa27.21■■□□□ 1.95
DDR1-237ENST00000437124 SHROOM2Q13796 1616 aa27.19■■□□□ 1.94
DDR1-237ENST00000437124 WRNQ14191 1432 aaPredicted RBP eCLIP27.18■■□□□ 1.94
DDR1-237ENST00000437124 FHAD1B1AJZ9 1412 aa27.14■■□□□ 1.93
DDR1-237ENST00000437124 ERICH3Q5RHP9 1530 aa27.06■■□□□ 1.92
DDR1-237ENST00000437124 KIF13AQ9H1H9 1805 aa27.05■■□□□ 1.92
DDR1-237ENST00000437124 TOP2BQ02880 1626 aa27.04■■□□□ 1.92
DDR1-237ENST00000437124 BIVM-ERCC5R4GMW8 1640 aa27.04■■□□□ 1.92
DDR1-237ENST00000437124 PRG4Q92954 1404 aaPredicted RBP26.99■■□□□ 1.91
DDR1-237ENST00000437124 JPH4Q96JJ6 628 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms