RNA–Protein interactions for RNA: ENST00000507008.5

SLC41A3-209, Transcript of solute carrier family 41 member 3, humanhuman

TSL 3

Gene SLC41A3, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC41A3-209ENST00000507008 NISCHQ9Y2I1 1504 aa39.34■■■■□ 3.89
SLC41A3-209ENST00000507008 CCDC180Q9P1Z9 1646 aa35.2■■■■□ 3.23
SLC41A3-209ENST00000507008 ABCC9O60706 1549 aa35.16■■■■□ 3.22
SLC41A3-209ENST00000507008 RB1CC1Q8TDY2 1594 aa33.55■■■□□ 2.96
SLC41A3-209ENST00000507008 DCAF8L2P0C7V8 631 aa33.45■■■□□ 2.95
SLC41A3-209ENST00000507008 NACADO15069 1562 aa33.34■■■□□ 2.93
SLC41A3-209ENST00000507008 MYO15BQ96JP2 1530 aa32.9■■■□□ 2.86
SLC41A3-209ENST00000507008 DNAJC5BQ9UF47 199 aa32.85■■■□□ 2.85
SLC41A3-209ENST00000507008 PABPN1Q86U42 306 aaKnown RBP eCLIP32.84■■■□□ 2.85
SLC41A3-209ENST00000507008 UNC13AQ9UPW8 1703 aa32.58■■■□□ 2.81
SLC41A3-209ENST00000507008 ZCCHC6Q5VYS8 1495 aaKnown RBP32.57■■■□□ 2.8
SLC41A3-209ENST00000507008 DCAF1Q9Y4B6 1507 aa32.5■■■□□ 2.79
SLC41A3-209ENST00000507008 BICRAQ9NZM4 1560 aa32.4■■■□□ 2.78
SLC41A3-209ENST00000507008 SHROOM4Q9ULL8 1493 aa32.13■■■□□ 2.73
SLC41A3-209ENST00000507008 SCRIBQ14160 1630 aa32.09■■■□□ 2.73
SLC41A3-209ENST00000507008 CC2D2AQ9P2K1 1620 aa31.73■■■□□ 2.67
SLC41A3-209ENST00000507008 CECR2Q9BXF3 1484 aa31.7■■■□□ 2.66
SLC41A3-209ENST00000507008 EIF4G1Q04637 1599 aaKnown RBP31.68■■■□□ 2.66
SLC41A3-209ENST00000507008 NCAPD3P42695 1498 aa30.78■■■□□ 2.52
SLC41A3-209ENST00000507008 ATAD2BQ9ULI0 1458 aa30.68■■■□□ 2.5
SLC41A3-209ENST00000507008 SMARCA2P51531 1590 aa30.64■■■□□ 2.5
SLC41A3-209ENST00000507008 SMARCA4P51532 1647 aa30.62■■■□□ 2.49
SLC41A3-209ENST00000507008 BAZ1AQ9NRL2 1556 aaPredicted RBP30.57■■■□□ 2.48
SLC41A3-209ENST00000507008 HMGXB3Q12766 1538 aa30.51■■■□□ 2.47
SLC41A3-209ENST00000507008 ERCC6Q03468 1493 aa30.45■■■□□ 2.47
SLC41A3-209ENST00000507008 BAZ1BQ9UIG0 1483 aaKnown RBP30.44■■■□□ 2.46
SLC41A3-209ENST00000507008 PEG3Q9GZU2 1588 aa30.32■■■□□ 2.44
SLC41A3-209ENST00000507008 CUX2O14529 1486 aa30.31■■■□□ 2.44
SLC41A3-209ENST00000507008 MROH2BQ7Z745 1585 aa30.27■■■□□ 2.44
SLC41A3-209ENST00000507008 DNAJC5Q9H3Z4 198 aa30.22■■■□□ 2.43
SLC41A3-209ENST00000507008 NESP48681 1621 aa30.18■■■□□ 2.42
SLC41A3-209ENST00000507008 LAMC3Q9Y6N6 1575 aa30.07■■■□□ 2.4
SLC41A3-209ENST00000507008 PDS5BQ9NTI5 1447 aa30■■■□□ 2.39
SLC41A3-209ENST00000507008 CADPSQ9ULU8 1353 aa29.9■■■□□ 2.38
SLC41A3-209ENST00000507008 WIZO95785 1651 aa29.9■■■□□ 2.38
SLC41A3-209ENST00000507008 THOC2Q8NI27 1593 aaKnown RBP29.79■■■□□ 2.36
SLC41A3-209ENST00000507008 KIF21AQ7Z4S6 1674 aa29.75■■■□□ 2.35
SLC41A3-209ENST00000507008 RSF1Q96T23 1441 aaPredicted RBP29.74■■■□□ 2.35
SLC41A3-209ENST00000507008 MRC2Q9UBG0 1479 aa29.62■■■□□ 2.33
SLC41A3-209ENST00000507008 TOP2AP11388 1531 aaKnown RBP29.57■■■□□ 2.32
SLC41A3-209ENST00000507008 CEP164Q9UPV0 1460 aa29.55■■■□□ 2.32
SLC41A3-209ENST00000507008 CFTRP13569 1480 aa29.52■■■□□ 2.32
SLC41A3-209ENST00000507008 FANCD2Q9BXW9 1451 aa29.52■■■□□ 2.32
SLC41A3-209ENST00000507008 WDR62O43379 1518 aa29.48■■■□□ 2.31
SLC41A3-209ENST00000507008 CCDC88BA6NC98 1476 aa29.28■■■□□ 2.28
SLC41A3-209ENST00000507008 URB2Q14146 1524 aaKnown RBP29.19■■■□□ 2.26
SLC41A3-209ENST00000507008 PRDM2Q13029 1718 aa29.13■■■□□ 2.25
SLC41A3-209ENST00000507008 OSCARQ8IYS5 282 aa29.1■■■□□ 2.25
SLC41A3-209ENST00000507008 ABCC8Q09428 1581 aa29.02■■■□□ 2.24
SLC41A3-209ENST00000507008 TRIM41Q8WV44 630 aa29.01■■■□□ 2.23
SLC41A3-209ENST00000507008 IFT140Q96RY7 1462 aa28.97■■■□□ 2.23
SLC41A3-209ENST00000507008 TOPBP1Q92547 1522 aa28.94■■■□□ 2.22
SLC41A3-209ENST00000507008 DNMBPQ6XZF7 1577 aa28.84■■■□□ 2.21
SLC41A3-209ENST00000507008 ZNF608Q9ULD9 1512 aaPredicted RBP28.81■■■□□ 2.2
SLC41A3-209ENST00000507008 SUPT5HO00267 1087 aaKnown RBP28.69■■■□□ 2.18
SLC41A3-209ENST00000507008 AQRO60306 1485 aaKnown RBP eCLIP28.65■■■□□ 2.183e-7■■■■■ 30.5
SLC41A3-209ENST00000507008 POLA1P09884 1462 aaPredicted RBP28.64■■■□□ 2.17
SLC41A3-209ENST00000507008 EIF4G3O43432 1585 aaKnown RBP28.63■■■□□ 2.17
SLC41A3-209ENST00000507008 SOGA1O94964 1423 aa28.63■■■□□ 2.17
SLC41A3-209ENST00000507008 FBLN2P98095 1184 aa28.62■■■□□ 2.17
SLC41A3-209ENST00000507008 TARBP1Q13395 1621 aaKnown RBP28.59■■■□□ 2.17
SLC41A3-209ENST00000507008 RAD54L2Q9Y4B4 1467 aa28.54■■■□□ 2.16
SLC41A3-209ENST00000507008 TDRD9Q8NDG6 1382 aaKnown RBP28.52■■■□□ 2.16
SLC41A3-209ENST00000507008 FGD5Q6ZNL6 1462 aa28.49■■■□□ 2.15
SLC41A3-209ENST00000507008 RIMBP3CA6NJZ7 1639 aa28.45■■■□□ 2.14
SLC41A3-209ENST00000507008 RIMBP3BA6NNM3 1639 aa28.45■■■□□ 2.14
SLC41A3-209ENST00000507008 RIMBP3Q9UFD9 1639 aa28.45■■■□□ 2.14
SLC41A3-209ENST00000507008 CHMP7Q8WUX9 453 aaPredicted RBP28.43■■■□□ 2.14
SLC41A3-209ENST00000507008 CUX1P39880 1505 aa28.43■■■□□ 2.14
SLC41A3-209ENST00000507008 WDR97A6NE52 1622 aa28.41■■■□□ 2.14
SLC41A3-209ENST00000507008 ARHGEF11O15085 1522 aa28.41■■■□□ 2.14
SLC41A3-209ENST00000507008 CHD1O14646 1710 aa28.38■■■□□ 2.13
SLC41A3-209ENST00000507008 CYB5RLQ6IPT4 315 aa28.38■■■□□ 2.13
SLC41A3-209ENST00000507008 GRIN2BQ13224 1484 aa28.33■■■□□ 2.13
SLC41A3-209ENST00000507008 SNAPC4Q5SXM2 1469 aa28.33■■■□□ 2.13
SLC41A3-209ENST00000507008 MAGI1Q96QZ7 1491 aaPredicted RBP28.3■■■□□ 2.12
SLC41A3-209ENST00000507008 GAPVD1Q14C86 1478 aa28.24■■■□□ 2.11
SLC41A3-209ENST00000507008 SYNJ2O15056 1496 aa28.2■■■□□ 2.1
SLC41A3-209ENST00000507008 SYNJ1O43426 1573 aa28.2■■■□□ 2.1
SLC41A3-209ENST00000507008 WRNQ14191 1432 aaPredicted RBP eCLIP28.19■■■□□ 2.1
SLC41A3-209ENST00000507008 ABCA10Q8WWZ4 1543 aa28.18■■■□□ 2.1
SLC41A3-209ENST00000507008 TRHP20396 242 aaPredicted RBP28.11■■■□□ 2.09
SLC41A3-209ENST00000507008 ARAP1Q96P48 1450 aa28.1■■■□□ 2.09
SLC41A3-209ENST00000507008 PBRM1Q86U86 1689 aa28.09■■■□□ 2.09
SLC41A3-209ENST00000507008 CLASP1Q7Z460 1538 aa28.08■■■□□ 2.08
SLC41A3-209ENST00000507008 ABCA5Q8WWZ7 1642 aa28.04■■■□□ 2.08
SLC41A3-209ENST00000507008 TOP2BQ02880 1626 aa28.03■■■□□ 2.08
SLC41A3-209ENST00000507008 BIVM-ERCC5R4GMW8 1640 aa28■■■□□ 2.07
SLC41A3-209ENST00000507008 GRIN2AQ12879 1464 aa27.92■■■□□ 2.06
SLC41A3-209ENST00000507008 FHAD1B1AJZ9 1412 aa27.91■■■□□ 2.06
SLC41A3-209ENST00000507008 ERICH3Q5RHP9 1530 aa27.85■■■□□ 2.05
SLC41A3-209ENST00000507008 ADAMTS12P58397 1594 aa27.83■■■□□ 2.05
SLC41A3-209ENST00000507008 NUP160Q12769 1436 aa27.8■■■□□ 2.04
SLC41A3-209ENST00000507008 CEP170Q5SW79 1584 aa27.73■■■□□ 2.03
SLC41A3-209ENST00000507008 JPH4Q96JJ6 628 aa27.69■■■□□ 2.02
SLC41A3-209ENST00000507008 KIF27Q86VH2 1401 aa27.64■■■□□ 2.02
SLC41A3-209ENST00000507008 PRG4Q92954 1404 aaPredicted RBP27.61■■■□□ 2.01
SLC41A3-209ENST00000507008 ERCC6L2Q5T890 1561 aa27.6■■■□□ 2.01
SLC41A3-209ENST00000507008 SHROOM2Q13796 1616 aa27.59■■■□□ 2.01
SLC41A3-209ENST00000507008 IGF1RP08069 1367 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 219.8 ms