Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.132e-6■■□□□ 13.9
U2AF2P26368 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.122e-6■■□□□ 13.9
U2AF2P26368 THUMPD3-203ENST00000417036 730 ntTSL 215.7■□□□□ 0.12e-6■■□□□ 13.9
U2AF2P26368 VGLL4-207ENST00000419541 466 ntTSL 315.6■□□□□ 0.092e-6■■□□□ 13.9
U2AF2P26368 VGLL4-215ENST00000458499 766 ntTSL 315.6■□□□□ 0.092e-6■■□□□ 13.9
U2AF2P26368 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.092e-6■■□□□ 13.9
U2AF2P26368 ZNF652-203ENST00000508237 4543 ntTSL 215.43■□□□□ 0.062e-6■■□□□ 13.9
U2AF2P26368 SAMD4B-202ENST00000594204 626 ntTSL 315.37■□□□□ 0.051e-6■■□□□ 13.9
U2AF2P26368 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC15.27■□□□□ 0.042e-6■■□□□ 13.9
U2AF2P26368 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.032e-6■■□□□ 13.9
U2AF2P26368 MAGI2-216ENST00000628997 641 ntTSL 315.15■□□□□ 0.028e-8■■□□□ 13.9
U2AF2P26368 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.012e-6■■□□□ 13.9
U2AF2P26368 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.012e-6■■□□□ 13.9
U2AF2P26368 CHPT1-207ENST00000552213 598 ntTSL 314.86□□□□□ -0.032e-6■■□□□ 13.9
U2AF2P26368 THUMPD3-206ENST00000452837 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.032e-6■■□□□ 13.9
U2AF2P26368 TRO-215ENST00000445561 2597 ntTSL 1 (best)14.56□□□□□ -0.082e-6■■□□□ 13.9
U2AF2P26368 TRO-224ENST00000492706 3677 ntTSL 214.41□□□□□ -0.12e-6■■□□□ 13.9
U2AF2P26368 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.125e-6■■□□□ 13.9
U2AF2P26368 AC023509.3-201ENST00000448979 1406 ntTSL 1 (best)14.18□□□□□ -0.142e-6■■□□□ 13.9
U2AF2P26368 VGLL4-201ENST00000273038 3725 ntTSL 1 (best) BASIC13.88□□□□□ -0.192e-6■■□□□ 13.9
U2AF2P26368 TRO-221ENST00000475183 632 ntTSL 313.82□□□□□ -0.22e-6■■□□□ 13.9
U2AF2P26368 PRKD3-209ENST00000477132 539 ntTSL 413.77□□□□□ -0.212e-6■■□□□ 13.9
U2AF2P26368 RAE1-209ENST00000527947 1503 ntTSL 1 (best) BASIC13.56□□□□□ -0.242e-6■■□□□ 13.9
U2AF2P26368 TRO-201ENST00000173898 4647 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.242e-6■■□□□ 13.9
U2AF2P26368 SLC39A9-204ENST00000554023 513 ntTSL 213.53□□□□□ -0.242e-6■■□□□ 13.9
U2AF2P26368 RBM33-208ENST00000438356 547 ntTSL 413.52□□□□□ -0.252e-6■■□□□ 13.9
U2AF2P26368 UBA3-212ENST00000630585 390 ntTSL 4 BASIC13.36□□□□□ -0.274e-8■■□□□ 13.9
U2AF2P26368 CUTC-203ENST00000471520 831 ntTSL 1 (best)13.35□□□□□ -0.272e-6■■□□□ 13.9
U2AF2P26368 RAE1-203ENST00000395841 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.322e-6■■□□□ 13.9
U2AF2P26368 THUMPD3-204ENST00000419437 704 ntTSL 213.07□□□□□ -0.322e-6■■□□□ 13.9
U2AF2P26368 PPP1R12A-203ENST00000450142 5721 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.335e-6■■□□□ 13.9
U2AF2P26368 FTSJ3-213ENST00000583901 867 ntTSL 212.97□□□□□ -0.332e-6■■□□□ 13.9
U2AF2P26368 RAE1-201ENST00000371242 2362 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.342e-6■■□□□ 13.9
U2AF2P26368 TBCA-202ENST00000380377 683 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.372e-6■■□□□ 13.9
U2AF2P26368 PPP1R12A-202ENST00000437004 4639 ntTSL 1 (best) BASIC12.75□□□□□ -0.375e-6■■□□□ 13.9
U2AF2P26368 THUMPD3-201ENST00000345094 3961 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.382e-6■■□□□ 13.9
U2AF2P26368 IQCH-AS1-202ENST00000559285 928 ntTSL 212.66□□□□□ -0.382e-6■■□□□ 13.9
U2AF2P26368 IFT88-204ENST00000461115 1440 ntTSL 212.65□□□□□ -0.382e-6■■□□□ 13.9
U2AF2P26368 SUGT1-202ENST00000343788 1217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.412e-6■■□□□ 13.9
U2AF2P26368 TUBGCP4-212ENST00000570081 544 ntTSL 412.32□□□□□ -0.442e-6■■□□□ 13.9
U2AF2P26368 SAMD4B-213ENST00000610417 3664 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.441e-6■■□□□ 13.9
U2AF2P26368 TRO-204ENST00000375041 3488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.532e-6■■□□□ 13.9
U2AF2P26368 SAMD4B-214ENST00000611159 3662 ntTSL 5 BASIC11.65□□□□□ -0.541e-6■■□□□ 13.9
U2AF2P26368 TRO-208ENST00000420798 3613 ntTSL 2 BASIC11.62□□□□□ -0.552e-6■■□□□ 13.9
U2AF2P26368 SUGT1-204ENST00000609175 2802 nt11.37□□□□□ -0.592e-6■■□□□ 13.9
U2AF2P26368 PPP1R12A-213ENST00000550107 2925 ntTSL 1 (best) BASIC11.28□□□□□ -0.65e-6■■□□□ 13.9
U2AF2P26368 RAE1-204ENST00000411894 588 ntTSL 511.22□□□□□ -0.612e-6■■□□□ 13.9
U2AF2P26368 RAE1-205ENST00000429339 480 ntTSL 511.22□□□□□ -0.612e-6■■□□□ 13.9
U2AF2P26368 SMG6-213ENST00000573166 4236 ntTSL 1 (best)11.2□□□□□ -0.622e-6■■□□□ 13.9
U2AF2P26368 TOPBP1-209ENST00000513818 898 ntTSL 1 (best)11.12□□□□□ -0.632e-6■■□□□ 13.9
U2AF2P26368 FTSJ3-201ENST00000427159 3559 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.632e-6■■□□□ 13.9
U2AF2P26368 NSMAF-201ENST00000038176 3569 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.642e-6■■□□□ 13.9
U2AF2P26368 RAE1-202ENST00000395840 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.642e-6■■□□□ 13.9
U2AF2P26368 TBCA-201ENST00000306388 2301 ntTSL 2 BASIC10.99□□□□□ -0.652e-6■■□□□ 13.9
U2AF2P26368 FOXM1-206ENST00000536066 2518 ntTSL 1 (best)10.84□□□□□ -0.672e-6■■□□□ 13.9
U2AF2P26368 CELF1-221ENST00000543178 576 ntTSL 410.76□□□□□ -0.692e-6■■□□□ 13.9
U2AF2P26368 NSMAF-208ENST00000519227 583 ntTSL 410.75□□□□□ -0.692e-6■■□□□ 13.9
U2AF2P26368 TBCA-208ENST00000520361 446 ntTSL 2 BASIC10.55□□□□□ -0.722e-6■■□□□ 13.9
U2AF2P26368 VGLL4-213ENST00000445411 726 ntTSL 510.49□□□□□ -0.732e-6■■□□□ 13.9
U2AF2P26368 FTSJ3-204ENST00000579831 411 ntTSL 310.26□□□□□ -0.772e-6■■□□□ 13.9
U2AF2P26368 CELF1-212ENST00000528538 581 ntTSL 410.1□□□□□ -0.792e-6■■□□□ 13.9
U2AF2P26368 FARP1-234ENST00000601361 457 ntTSL 210.05□□□□□ -0.82e-6■■□□□ 13.9
U2AF2P26368 IQCH-AS1-203ENST00000559298 5753 ntTSL 5 BASIC9.8□□□□□ -0.842e-6■■□□□ 13.9
U2AF2P26368 SMG6-218ENST00000575454 652 ntTSL 39.7□□□□□ -0.862e-6■■□□□ 13.9
U2AF2P26368 DHTKD1-205ENST00000465617 773 ntTSL 39.69□□□□□ -0.862e-6■■□□□ 13.9
U2AF2P26368 ANKLE2-205ENST00000538591 886 ntTSL 39.37□□□□□ -0.912e-6■■□□□ 13.9
U2AF2P26368 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC9.36□□□□□ -0.912e-6■■□□□ 13.9
U2AF2P26368 RNMT-205ENST00000588457 1612 ntTSL 29.34□□□□□ -0.915e-6■■□□□ 13.9
U2AF2P26368 ANKLE2-211ENST00000545623 1288 ntTSL 39.13□□□□□ -0.952e-6■■□□□ 13.9
U2AF2P26368 NSMAF-216ENST00000523982 562 ntTSL 49.08□□□□□ -0.962e-6■■□□□ 13.9
U2AF2P26368 ERBIN-213ENST00000509946 641 ntTSL 29.06□□□□□ -0.962e-6■■□□□ 13.9
U2AF2P26368 NBEAL1-202ENST00000434469 920 ntTSL 1 (best)9.04□□□□□ -0.962e-6■■□□□ 13.9
U2AF2P26368 ANKRD13C-205ENST00000498735 530 ntTSL 58.97□□□□□ -0.972e-6■■□□□ 13.9
U2AF2P26368 CELF1-218ENST00000535982 549 ntTSL 48.82□□□□□ -12e-6■■□□□ 13.9
U2AF2P26368 RAE1-206ENST00000452119 691 ntTSL 38.78□□□□□ -12e-6■■□□□ 13.9
U2AF2P26368 FOXM1-205ENST00000535350 618 ntTSL 38.21□□□□□ -1.12e-6■■□□□ 13.9
U2AF2P26368 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.12e-6■■□□□ 13.9
U2AF2P26368 ANKLE2-204ENST00000535036 741 ntTSL 57.88□□□□□ -1.152e-6■■□□□ 13.9
U2AF2P26368 SMG6-217ENST00000575338 546 ntTSL 47.87□□□□□ -1.152e-6■■□□□ 13.9
U2AF2P26368 WDFY3-203ENST00000426414 3428 ntTSL 27.85□□□□□ -1.152e-6■■□□□ 13.9
U2AF2P26368 RNMT-210ENST00000593007 811 ntTSL 47.79□□□□□ -1.165e-6■■□□□ 13.9
U2AF2P26368 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.172e-6■■□□□ 13.9
U2AF2P26368 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.66□□□□□ -1.182e-6■■□□□ 13.9
U2AF2P26368 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.192e-6■■□□□ 13.9
U2AF2P26368 IFT88-207ENST00000537103 2590 ntTSL 57.51□□□□□ -1.212e-6■■□□□ 13.9
U2AF2P26368 NBEAL1-201ENST00000414576 2240 ntTSL 57.05□□□□□ -1.282e-6■■□□□ 13.9
U2AF2P26368 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.325e-6■■□□□ 13.9
U2AF2P26368 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.362e-6■■□□□ 13.9
U2AF2P26368 CELF1-211ENST00000528434 543 ntTSL 56.38□□□□□ -1.392e-6■■□□□ 13.9
U2AF2P26368 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.23□□□□□ -1.412e-6■■□□□ 13.9
U2AF2P26368 ABLIM1-209ENST00000440467 541 ntTSL 36.2□□□□□ -1.422e-6■■□□□ 13.9
U2AF2P26368 PCCA-209ENST00000485946 1789 ntTSL 26.14□□□□□ -1.432e-6■■□□□ 13.9
U2AF2P26368 CELF1-209ENST00000526277 556 ntTSL 46.08□□□□□ -1.442e-6■■□□□ 13.9
U2AF2P26368 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.01□□□□□ -1.452e-6■■□□□ 13.9
U2AF2P26368 PCCA-214ENST00000637358 1533 ntTSL 55.94□□□□□ -1.462e-6■■□□□ 13.9
U2AF2P26368 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.495e-6■■□□□ 13.9
U2AF2P26368 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.56□□□□□ -1.525e-6■■□□□ 13.9
U2AF2P26368 GGNBP2-218ENST00000620927 680 ntTSL 25.54□□□□□ -1.522e-6■■□□□ 13.9
U2AF2P26368 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.15□□□□□ -1.582e-6■■□□□ 13.9
U2AF2P26368 KIAA1109-215ENST00000491933 718 ntTSL 35.09□□□□□ -1.592e-6■■□□□ 13.9
Retrieved 100 of 36,523 protein–RNA pairs in 271 ms