RNA–Protein interactions for RNA: ENST00000594204.1

SAMD4B-202, Transcript of sterile alpha motif domain containing 4B, humanhuman

TSL 3

Gene SAMD4B, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-202ENST00000594204 NISCHQ9Y2I1 1504 aa34.38■■■■□ 3.09
SAMD4B-202ENST00000594204 CCDC180Q9P1Z9 1646 aa30.66■■■□□ 2.5
SAMD4B-202ENST00000594204 ABCC9O60706 1549 aa30.57■■■□□ 2.49
SAMD4B-202ENST00000594204 RB1CC1Q8TDY2 1594 aa29.14■■■□□ 2.26
SAMD4B-202ENST00000594204 NACADO15069 1562 aa29.02■■■□□ 2.24
SAMD4B-202ENST00000594204 DCAF8L2P0C7V8 631 aa29.01■■■□□ 2.23
SAMD4B-202ENST00000594204 MYO15BQ96JP2 1530 aa28.7■■■□□ 2.19
SAMD4B-202ENST00000594204 PABPN1Q86U42 306 aaKnown RBP eCLIP28.55■■■□□ 2.16
SAMD4B-202ENST00000594204 DNAJC5BQ9UF47 199 aa28.54■■■□□ 2.16
SAMD4B-202ENST00000594204 ZCCHC6Q5VYS8 1495 aaKnown RBP28.53■■■□□ 2.16
SAMD4B-202ENST00000594204 DCAF1Q9Y4B6 1507 aa28.4■■■□□ 2.14
SAMD4B-202ENST00000594204 UNC13AQ9UPW8 1703 aa28.36■■■□□ 2.13
SAMD4B-202ENST00000594204 BICRAQ9NZM4 1560 aa28.28■■■□□ 2.12
SAMD4B-202ENST00000594204 SCRIBQ14160 1630 aa28■■■□□ 2.07
SAMD4B-202ENST00000594204 SHROOM4Q9ULL8 1493 aa27.95■■■□□ 2.07
SAMD4B-202ENST00000594204 EIF4G1Q04637 1599 aaKnown RBP27.59■■■□□ 2.01
SAMD4B-202ENST00000594204 CC2D2AQ9P2K1 1620 aa27.58■■■□□ 2.01
SAMD4B-202ENST00000594204 CECR2Q9BXF3 1484 aa27.52■■■□□ 2
SAMD4B-202ENST00000594204 NCAPD3P42695 1498 aa26.83■■□□□ 1.89
SAMD4B-202ENST00000594204 ATAD2BQ9ULI0 1458 aa26.77■■□□□ 1.88
SAMD4B-202ENST00000594204 SMARCA4P51532 1647 aa26.73■■□□□ 1.87
SAMD4B-202ENST00000594204 SMARCA2P51531 1590 aa26.67■■□□□ 1.86
SAMD4B-202ENST00000594204 BAZ1AQ9NRL2 1556 aaPredicted RBP26.66■■□□□ 1.86
SAMD4B-202ENST00000594204 HMGXB3Q12766 1538 aa26.6■■□□□ 1.85
SAMD4B-202ENST00000594204 BAZ1BQ9UIG0 1483 aaKnown RBP26.5■■□□□ 1.83
SAMD4B-202ENST00000594204 MROH2BQ7Z745 1585 aa26.5■■□□□ 1.83
SAMD4B-202ENST00000594204 PEG3Q9GZU2 1588 aa26.48■■□□□ 1.83
SAMD4B-202ENST00000594204 ERCC6Q03468 1493 aa26.39■■□□□ 1.82
SAMD4B-202ENST00000594204 NESP48681 1621 aa26.31■■□□□ 1.8
SAMD4B-202ENST00000594204 CUX2O14529 1486 aa26.26■■□□□ 1.79
SAMD4B-202ENST00000594204 WIZO95785 1651 aa26.13■■□□□ 1.77
SAMD4B-202ENST00000594204 LAMC3Q9Y6N6 1575 aa26.13■■□□□ 1.77
SAMD4B-202ENST00000594204 DNAJC5Q9H3Z4 198 aa26.06■■□□□ 1.76
SAMD4B-202ENST00000594204 RSF1Q96T23 1441 aaPredicted RBP26.05■■□□□ 1.76
SAMD4B-202ENST00000594204 CADPSQ9ULU8 1353 aa26.05■■□□□ 1.76
SAMD4B-202ENST00000594204 PDS5BQ9NTI5 1447 aa26.05■■□□□ 1.76
SAMD4B-202ENST00000594204 THOC2Q8NI27 1593 aaKnown RBP25.95■■□□□ 1.74
SAMD4B-202ENST00000594204 KIF21AQ7Z4S6 1674 aa25.87■■□□□ 1.73
SAMD4B-202ENST00000594204 TOP2AP11388 1531 aaKnown RBP25.85■■□□□ 1.73
SAMD4B-202ENST00000594204 MRC2Q9UBG0 1479 aa25.78■■□□□ 1.72
SAMD4B-202ENST00000594204 CFTRP13569 1480 aa25.77■■□□□ 1.72
SAMD4B-202ENST00000594204 FANCD2Q9BXW9 1451 aa25.72■■□□□ 1.71
SAMD4B-202ENST00000594204 CEP164Q9UPV0 1460 aa25.72■■□□□ 1.71
SAMD4B-202ENST00000594204 WDR62O43379 1518 aa25.68■■□□□ 1.7
SAMD4B-202ENST00000594204 CCDC88BA6NC98 1476 aa25.6■■□□□ 1.69
SAMD4B-202ENST00000594204 URB2Q14146 1524 aaKnown RBP25.47■■□□□ 1.67
SAMD4B-202ENST00000594204 PRDM2Q13029 1718 aa25.34■■□□□ 1.65
SAMD4B-202ENST00000594204 TOPBP1Q92547 1522 aa25.24■■□□□ 1.63
SAMD4B-202ENST00000594204 ABCC8Q09428 1581 aa25.21■■□□□ 1.63
SAMD4B-202ENST00000594204 IFT140Q96RY7 1462 aa25.21■■□□□ 1.63
SAMD4B-202ENST00000594204 OSCARQ8IYS5 282 aa25.15■■□□□ 1.62
SAMD4B-202ENST00000594204 DNMBPQ6XZF7 1577 aa25.14■■□□□ 1.62
SAMD4B-202ENST00000594204 ZNF608Q9ULD9 1512 aaPredicted RBP25.14■■□□□ 1.62
SAMD4B-202ENST00000594204 SUPT5HO00267 1087 aaKnown RBP25.1■■□□□ 1.61
SAMD4B-202ENST00000594204 POLA1P09884 1462 aaPredicted RBP25.01■■□□□ 1.59
SAMD4B-202ENST00000594204 TRIM41Q8WV44 630 aa25■■□□□ 1.59
SAMD4B-202ENST00000594204 AQRO60306 1485 aaKnown RBP eCLIP24.96■■□□□ 1.597e-6■□□□□ 9.9
SAMD4B-202ENST00000594204 TARBP1Q13395 1621 aaKnown RBP24.95■■□□□ 1.58
SAMD4B-202ENST00000594204 EIF4G3O43432 1585 aaKnown RBP24.94■■□□□ 1.58
SAMD4B-202ENST00000594204 SOGA1O94964 1423 aa24.93■■□□□ 1.58
SAMD4B-202ENST00000594204 RAD54L2Q9Y4B4 1467 aa24.92■■□□□ 1.58
SAMD4B-202ENST00000594204 CUX1P39880 1505 aa24.87■■□□□ 1.57
SAMD4B-202ENST00000594204 FGD5Q6ZNL6 1462 aa24.87■■□□□ 1.57
SAMD4B-202ENST00000594204 TDRD9Q8NDG6 1382 aaKnown RBP24.85■■□□□ 1.57
SAMD4B-202ENST00000594204 FBLN2P98095 1184 aa24.78■■□□□ 1.56
SAMD4B-202ENST00000594204 WDR97A6NE52 1622 aa24.72■■□□□ 1.55
SAMD4B-202ENST00000594204 SNAPC4Q5SXM2 1469 aa24.7■■□□□ 1.54
SAMD4B-202ENST00000594204 RIMBP3CA6NJZ7 1639 aa24.69■■□□□ 1.54
SAMD4B-202ENST00000594204 RIMBP3BA6NNM3 1639 aa24.69■■□□□ 1.54
SAMD4B-202ENST00000594204 RIMBP3Q9UFD9 1639 aa24.69■■□□□ 1.54
SAMD4B-202ENST00000594204 ARHGEF11O15085 1522 aa24.68■■□□□ 1.54
SAMD4B-202ENST00000594204 GRIN2BQ13224 1484 aa24.67■■□□□ 1.54
SAMD4B-202ENST00000594204 CHD1O14646 1710 aa24.66■■□□□ 1.54
SAMD4B-202ENST00000594204 CHMP7Q8WUX9 453 aaPredicted RBP24.64■■□□□ 1.54
SAMD4B-202ENST00000594204 MAGI1Q96QZ7 1491 aaPredicted RBP24.63■■□□□ 1.53
SAMD4B-202ENST00000594204 ABCA10Q8WWZ4 1543 aa24.61■■□□□ 1.53
SAMD4B-202ENST00000594204 GAPVD1Q14C86 1478 aa24.61■■□□□ 1.53
SAMD4B-202ENST00000594204 WRNQ14191 1432 aaPredicted RBP eCLIP24.58■■□□□ 1.53
SAMD4B-202ENST00000594204 CYB5RLQ6IPT4 315 aa24.56■■□□□ 1.52
SAMD4B-202ENST00000594204 SYNJ2O15056 1496 aa24.55■■□□□ 1.52
SAMD4B-202ENST00000594204 TOP2BQ02880 1626 aa24.5■■□□□ 1.51
SAMD4B-202ENST00000594204 ABCA5Q8WWZ7 1642 aa24.5■■□□□ 1.51
SAMD4B-202ENST00000594204 SYNJ1O43426 1573 aa24.48■■□□□ 1.51
SAMD4B-202ENST00000594204 BIVM-ERCC5R4GMW8 1640 aa24.47■■□□□ 1.51
SAMD4B-202ENST00000594204 CLASP1Q7Z460 1538 aa24.47■■□□□ 1.51
SAMD4B-202ENST00000594204 ARAP1Q96P48 1450 aa24.46■■□□□ 1.51
SAMD4B-202ENST00000594204 PBRM1Q86U86 1689 aa24.46■■□□□ 1.51
SAMD4B-202ENST00000594204 GRIN2AQ12879 1464 aa24.33■■□□□ 1.49
SAMD4B-202ENST00000594204 FHAD1B1AJZ9 1412 aa24.32■■□□□ 1.48
SAMD4B-202ENST00000594204 ADAMTS12P58397 1594 aa24.31■■□□□ 1.48
SAMD4B-202ENST00000594204 ERICH3Q5RHP9 1530 aa24.29■■□□□ 1.48
SAMD4B-202ENST00000594204 NUP160Q12769 1436 aa24.27■■□□□ 1.48
SAMD4B-202ENST00000594204 TRHP20396 242 aaPredicted RBP24.21■■□□□ 1.47
SAMD4B-202ENST00000594204 CEP170Q5SW79 1584 aa24.2■■□□□ 1.47
SAMD4B-202ENST00000594204 ERCC6L2Q5T890 1561 aa24.11■■□□□ 1.45
SAMD4B-202ENST00000594204 KIF27Q86VH2 1401 aa24.1■■□□□ 1.45
SAMD4B-202ENST00000594204 IGF1RP08069 1367 aa24.09■■□□□ 1.45
SAMD4B-202ENST00000594204 JPH4Q96JJ6 628 aa24.07■■□□□ 1.44
SAMD4B-202ENST00000594204 SHROOM2Q13796 1616 aa24.05■■□□□ 1.44
SAMD4B-202ENST00000594204 PRG4Q92954 1404 aaPredicted RBP24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms