RNA–Protein interactions for RNA: ENST00000452119.1

RAE1-206, Transcript of ribonucleic acid export 1, humanhuman

TSL 3

Gene RAE1, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-206ENST00000452119 NISCHQ9Y2I1 1504 aa18.58■□□□□ 0.56
RAE1-206ENST00000452119 CCDC180Q9P1Z9 1646 aa16.56■□□□□ 0.24
RAE1-206ENST00000452119 ABCC9O60706 1549 aa16.37■□□□□ 0.21
RAE1-206ENST00000452119 DCAF8L2P0C7V8 631 aa15.63■□□□□ 0.09
RAE1-206ENST00000452119 RB1CC1Q8TDY2 1594 aa15.62■□□□□ 0.09
RAE1-206ENST00000452119 NACADO15069 1562 aa15.53■□□□□ 0.08
RAE1-206ENST00000452119 ZCCHC6Q5VYS8 1495 aaKnown RBP15.47■□□□□ 0.07
RAE1-206ENST00000452119 UNC13AQ9UPW8 1703 aa15.37■□□□□ 0.05
RAE1-206ENST00000452119 MYO15BQ96JP2 1530 aa15.33■□□□□ 0.05
RAE1-206ENST00000452119 DCAF1Q9Y4B6 1507 aa15.27■□□□□ 0.04
RAE1-206ENST00000452119 PABPN1Q86U42 306 aaKnown RBP eCLIP15.27■□□□□ 0.04
RAE1-206ENST00000452119 SCRIBQ14160 1630 aa15.23■□□□□ 0.03
RAE1-206ENST00000452119 BICRAQ9NZM4 1560 aa15.19■□□□□ 0.02
RAE1-206ENST00000452119 DNAJC5BQ9UF47 199 aa15.05■□□□□ -0
RAE1-206ENST00000452119 SHROOM4Q9ULL8 1493 aa14.87□□□□□ -0.03
RAE1-206ENST00000452119 EIF4G1Q04637 1599 aaKnown RBP14.79□□□□□ -0.04
RAE1-206ENST00000452119 CC2D2AQ9P2K1 1620 aa14.77□□□□□ -0.04
RAE1-206ENST00000452119 CECR2Q9BXF3 1484 aa14.66□□□□□ -0.06
RAE1-206ENST00000452119 SMARCA4P51532 1647 aa14.48□□□□□ -0.09
RAE1-206ENST00000452119 BAZ1AQ9NRL2 1556 aaPredicted RBP14.39□□□□□ -0.11
RAE1-206ENST00000452119 MROH2BQ7Z745 1585 aa14.38□□□□□ -0.11
RAE1-206ENST00000452119 ATAD2BQ9ULI0 1458 aa14.37□□□□□ -0.11
RAE1-206ENST00000452119 SMARCA2P51531 1590 aa14.33□□□□□ -0.12
RAE1-206ENST00000452119 NCAPD3P42695 1498 aa14.31□□□□□ -0.12
RAE1-206ENST00000452119 HMGXB3Q12766 1538 aa14.28□□□□□ -0.12
RAE1-206ENST00000452119 BAZ1BQ9UIG0 1483 aaKnown RBP14.27□□□□□ -0.12
RAE1-206ENST00000452119 WIZO95785 1651 aa14.26□□□□□ -0.13
RAE1-206ENST00000452119 PEG3Q9GZU2 1588 aa14.26□□□□□ -0.13
RAE1-206ENST00000452119 NESP48681 1621 aa14.15□□□□□ -0.14
RAE1-206ENST00000452119 RSF1Q96T23 1441 aaPredicted RBP14.13□□□□□ -0.15
RAE1-206ENST00000452119 ERCC6Q03468 1493 aa14.08□□□□□ -0.16
RAE1-206ENST00000452119 TOP2AP11388 1531 aaKnown RBP14.03□□□□□ -0.16
RAE1-206ENST00000452119 KIF21AQ7Z4S6 1674 aa14.01□□□□□ -0.17
RAE1-206ENST00000452119 LAMC3Q9Y6N6 1575 aa14□□□□□ -0.17
RAE1-206ENST00000452119 THOC2Q8NI27 1593 aaKnown RBP13.93□□□□□ -0.18
RAE1-206ENST00000452119 CADPSQ9ULU8 1353 aa13.91□□□□□ -0.18
RAE1-206ENST00000452119 CUX2O14529 1486 aa13.87□□□□□ -0.19
RAE1-206ENST00000452119 PDS5BQ9NTI5 1447 aa13.87□□□□□ -0.19
RAE1-206ENST00000452119 CCDC88BA6NC98 1476 aa13.87□□□□□ -0.19
RAE1-206ENST00000452119 CFTRP13569 1480 aa13.82□□□□□ -0.2
RAE1-206ENST00000452119 FANCD2Q9BXW9 1451 aa13.82□□□□□ -0.2
RAE1-206ENST00000452119 PRDM2Q13029 1718 aa13.81□□□□□ -0.2
RAE1-206ENST00000452119 MRC2Q9UBG0 1479 aa13.8□□□□□ -0.2
RAE1-206ENST00000452119 CEP164Q9UPV0 1460 aa13.8□□□□□ -0.2
RAE1-206ENST00000452119 SUPT5HO00267 1087 aaKnown RBP13.79□□□□□ -0.2
RAE1-206ENST00000452119 WDR62O43379 1518 aa13.75□□□□□ -0.21
RAE1-206ENST00000452119 URB2Q14146 1524 aaKnown RBP13.71□□□□□ -0.21
RAE1-206ENST00000452119 TOPBP1Q92547 1522 aa13.59□□□□□ -0.23
RAE1-206ENST00000452119 DNMBPQ6XZF7 1577 aa13.57□□□□□ -0.24
RAE1-206ENST00000452119 DNAJC5Q9H3Z4 198 aa13.52□□□□□ -0.25
RAE1-206ENST00000452119 ZNF608Q9ULD9 1512 aaPredicted RBP13.52□□□□□ -0.25
RAE1-206ENST00000452119 CUX1P39880 1505 aa13.49□□□□□ -0.25
RAE1-206ENST00000452119 IFT140Q96RY7 1462 aa13.48□□□□□ -0.25
RAE1-206ENST00000452119 EIF4G3O43432 1585 aaKnown RBP13.48□□□□□ -0.25
RAE1-206ENST00000452119 POLA1P09884 1462 aaPredicted RBP13.48□□□□□ -0.25
RAE1-206ENST00000452119 ABCC8Q09428 1581 aa13.47□□□□□ -0.25
RAE1-206ENST00000452119 TARBP1Q13395 1621 aaKnown RBP13.46□□□□□ -0.25
RAE1-206ENST00000452119 RAD54L2Q9Y4B4 1467 aa13.46□□□□□ -0.25
RAE1-206ENST00000452119 FGD5Q6ZNL6 1462 aa13.45□□□□□ -0.26
RAE1-206ENST00000452119 AQRO60306 1485 aaKnown RBP eCLIP13.41□□□□□ -0.26
RAE1-206ENST00000452119 SOGA1O94964 1423 aa13.39□□□□□ -0.27
RAE1-206ENST00000452119 SYNJ1O43426 1573 aa13.38□□□□□ -0.27
RAE1-206ENST00000452119 WDR97A6NE52 1622 aa13.38□□□□□ -0.27
RAE1-206ENST00000452119 TDRD9Q8NDG6 1382 aaKnown RBP13.36□□□□□ -0.27
RAE1-206ENST00000452119 CHD1O14646 1710 aa13.35□□□□□ -0.27
RAE1-206ENST00000452119 BIVM-ERCC5R4GMW8 1640 aa13.34□□□□□ -0.27
RAE1-206ENST00000452119 TOP2BQ02880 1626 aa13.32□□□□□ -0.28
RAE1-206ENST00000452119 WRNQ14191 1432 aaPredicted RBP eCLIP13.32□□□□□ -0.28
RAE1-206ENST00000452119 PBRM1Q86U86 1689 aa13.31□□□□□ -0.28
RAE1-206ENST00000452119 SNAPC4Q5SXM2 1469 aa13.29□□□□□ -0.28
RAE1-206ENST00000452119 ABCA5Q8WWZ7 1642 aa13.28□□□□□ -0.28
RAE1-206ENST00000452119 FBLN2P98095 1184 aa13.27□□□□□ -0.29
RAE1-206ENST00000452119 OSCARQ8IYS5 282 aa13.26□□□□□ -0.29
RAE1-206ENST00000452119 ABCA10Q8WWZ4 1543 aa13.25□□□□□ -0.29
RAE1-206ENST00000452119 GRIN2BQ13224 1484 aa13.23□□□□□ -0.29
RAE1-206ENST00000452119 GAPVD1Q14C86 1478 aa13.23□□□□□ -0.29
RAE1-206ENST00000452119 TRIM41Q8WV44 630 aa13.2□□□□□ -0.3
RAE1-206ENST00000452119 RIMBP3CA6NJZ7 1639 aa13.2□□□□□ -0.3
RAE1-206ENST00000452119 RIMBP3BA6NNM3 1639 aa13.2□□□□□ -0.3
RAE1-206ENST00000452119 RIMBP3Q9UFD9 1639 aa13.2□□□□□ -0.3
RAE1-206ENST00000452119 MAGI1Q96QZ7 1491 aaPredicted RBP13.19□□□□□ -0.3
RAE1-206ENST00000452119 ADAMTS12P58397 1594 aa13.16□□□□□ -0.3
RAE1-206ENST00000452119 SYNJ2O15056 1496 aa13.16□□□□□ -0.3
RAE1-206ENST00000452119 ARHGEF11O15085 1522 aa13.15□□□□□ -0.3
RAE1-206ENST00000452119 CHMP7Q8WUX9 453 aaPredicted RBP13.15□□□□□ -0.3
RAE1-206ENST00000452119 CLASP1Q7Z460 1538 aa13.13□□□□□ -0.31
RAE1-206ENST00000452119 GRIN2AQ12879 1464 aa13.09□□□□□ -0.31
RAE1-206ENST00000452119 ERICH3Q5RHP9 1530 aa13.08□□□□□ -0.31
RAE1-206ENST00000452119 CEP170Q5SW79 1584 aa13.08□□□□□ -0.32
RAE1-206ENST00000452119 FHAD1B1AJZ9 1412 aa13.05□□□□□ -0.32
RAE1-206ENST00000452119 ARAP1Q96P48 1450 aa13.04□□□□□ -0.32
RAE1-206ENST00000452119 ERCC6L2Q5T890 1561 aa13.03□□□□□ -0.32
RAE1-206ENST00000452119 KIF27Q86VH2 1401 aa13.02□□□□□ -0.33
RAE1-206ENST00000452119 CYB5RLQ6IPT4 315 aa13.01□□□□□ -0.33
RAE1-206ENST00000452119 RUSC2Q8N2Y8 1516 aa13□□□□□ -0.33
RAE1-206ENST00000452119 NUP160Q12769 1436 aa13□□□□□ -0.33
RAE1-206ENST00000452119 CUL7Q14999 1698 aa12.99□□□□□ -0.33
RAE1-206ENST00000452119 IGF1RP08069 1367 aa12.97□□□□□ -0.33
RAE1-206ENST00000452119 SHROOM2Q13796 1616 aa12.95□□□□□ -0.34
RAE1-206ENST00000452119 CARMIL1Q5VZK9 1371 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms