RNA–Protein interactions for RNA: ENST00000528538.5

CELF1-212, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 4

Gene CELF1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-212ENST00000528538 NISCHQ9Y2I1 1504 aa22.64■■□□□ 1.21
CELF1-212ENST00000528538 CCDC180Q9P1Z9 1646 aa20.26■□□□□ 0.83
CELF1-212ENST00000528538 ABCC9O60706 1549 aa19.97■□□□□ 0.79
CELF1-212ENST00000528538 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
CELF1-212ENST00000528538 NACADO15069 1562 aa19.1■□□□□ 0.65
CELF1-212ENST00000528538 MYO15BQ96JP2 1530 aa19■□□□□ 0.63
CELF1-212ENST00000528538 DCAF8L2P0C7V8 631 aa18.84■□□□□ 0.61
CELF1-212ENST00000528538 ZCCHC6Q5VYS8 1495 aaKnown RBP18.81■□□□□ 0.6
CELF1-212ENST00000528538 DCAF1Q9Y4B6 1507 aa18.79■□□□□ 0.6
CELF1-212ENST00000528538 UNC13AQ9UPW8 1703 aa18.74■□□□□ 0.59
CELF1-212ENST00000528538 DNAJC5BQ9UF47 199 aa18.66■□□□□ 0.58
CELF1-212ENST00000528538 BICRAQ9NZM4 1560 aa18.64■□□□□ 0.58
CELF1-212ENST00000528538 PABPN1Q86U42 306 aaKnown RBP eCLIP18.6■□□□□ 0.57
CELF1-212ENST00000528538 SHROOM4Q9ULL8 1493 aa18.45■□□□□ 0.54
CELF1-212ENST00000528538 SCRIBQ14160 1630 aa18.35■□□□□ 0.53
CELF1-212ENST00000528538 EIF4G1Q04637 1599 aaKnown RBP18.13■□□□□ 0.49
CELF1-212ENST00000528538 CC2D2AQ9P2K1 1620 aa18.11■□□□□ 0.49
CELF1-212ENST00000528538 CECR2Q9BXF3 1484 aa18.01■□□□□ 0.47
CELF1-212ENST00000528538 NCAPD3P42695 1498 aa17.67■□□□□ 0.42
CELF1-212ENST00000528538 SMARCA4P51532 1647 aa17.61■□□□□ 0.41
CELF1-212ENST00000528538 ATAD2BQ9ULI0 1458 aa17.6■□□□□ 0.41
CELF1-212ENST00000528538 BAZ1AQ9NRL2 1556 aaPredicted RBP17.55■□□□□ 0.4
CELF1-212ENST00000528538 SMARCA2P51531 1590 aa17.54■□□□□ 0.4
CELF1-212ENST00000528538 HMGXB3Q12766 1538 aa17.52■□□□□ 0.4
CELF1-212ENST00000528538 PEG3Q9GZU2 1588 aa17.51■□□□□ 0.39
CELF1-212ENST00000528538 MROH2BQ7Z745 1585 aa17.42■□□□□ 0.38
CELF1-212ENST00000528538 BAZ1BQ9UIG0 1483 aaKnown RBP17.37■□□□□ 0.37
CELF1-212ENST00000528538 NESP48681 1621 aa17.23■□□□□ 0.35
CELF1-212ENST00000528538 CUX2O14529 1486 aa17.22■□□□□ 0.35
CELF1-212ENST00000528538 WIZO95785 1651 aa17.2■□□□□ 0.34
CELF1-212ENST00000528538 LAMC3Q9Y6N6 1575 aa17.19■□□□□ 0.34
CELF1-212ENST00000528538 ERCC6Q03468 1493 aa17.19■□□□□ 0.34
CELF1-212ENST00000528538 RSF1Q96T23 1441 aaPredicted RBP17.14■□□□□ 0.33
CELF1-212ENST00000528538 CADPSQ9ULU8 1353 aa17.09■□□□□ 0.33
CELF1-212ENST00000528538 THOC2Q8NI27 1593 aaKnown RBP17.07■□□□□ 0.32
CELF1-212ENST00000528538 PDS5BQ9NTI5 1447 aa17.06■□□□□ 0.32
CELF1-212ENST00000528538 TOP2AP11388 1531 aaKnown RBP17.02■□□□□ 0.32
CELF1-212ENST00000528538 KIF21AQ7Z4S6 1674 aa17.02■□□□□ 0.32
CELF1-212ENST00000528538 DNAJC5Q9H3Z4 198 aa17.01■□□□□ 0.31
CELF1-212ENST00000528538 CFTRP13569 1480 aa16.96■□□□□ 0.31
CELF1-212ENST00000528538 MRC2Q9UBG0 1479 aa16.9■□□□□ 0.3
CELF1-212ENST00000528538 WDR62O43379 1518 aa16.89■□□□□ 0.29
CELF1-212ENST00000528538 FANCD2Q9BXW9 1451 aa16.86■□□□□ 0.29
CELF1-212ENST00000528538 CEP164Q9UPV0 1460 aa16.85■□□□□ 0.29
CELF1-212ENST00000528538 CCDC88BA6NC98 1476 aa16.83■□□□□ 0.28
CELF1-212ENST00000528538 PRDM2Q13029 1718 aa16.78■□□□□ 0.28
CELF1-212ENST00000528538 URB2Q14146 1524 aaKnown RBP16.73■□□□□ 0.27
CELF1-212ENST00000528538 ABCC8Q09428 1581 aa16.59■□□□□ 0.25
CELF1-212ENST00000528538 TOPBP1Q92547 1522 aa16.58■□□□□ 0.24
CELF1-212ENST00000528538 IFT140Q96RY7 1462 aa16.54■□□□□ 0.24
CELF1-212ENST00000528538 DNMBPQ6XZF7 1577 aa16.53■□□□□ 0.24
CELF1-212ENST00000528538 ZNF608Q9ULD9 1512 aaPredicted RBP16.47■□□□□ 0.23
CELF1-212ENST00000528538 TARBP1Q13395 1621 aaKnown RBP16.45■□□□□ 0.22
CELF1-212ENST00000528538 OSCARQ8IYS5 282 aa16.42■□□□□ 0.22
CELF1-212ENST00000528538 POLA1P09884 1462 aaPredicted RBP16.42■□□□□ 0.22
CELF1-212ENST00000528538 EIF4G3O43432 1585 aaKnown RBP16.38■□□□□ 0.21
CELF1-212ENST00000528538 CUX1P39880 1505 aa16.36■□□□□ 0.21
CELF1-212ENST00000528538 SUPT5HO00267 1087 aaKnown RBP16.36■□□□□ 0.21
CELF1-212ENST00000528538 AQRO60306 1485 aaKnown RBP eCLIP16.34■□□□□ 0.21
CELF1-212ENST00000528538 SOGA1O94964 1423 aa16.33■□□□□ 0.2
CELF1-212ENST00000528538 WDR97A6NE52 1622 aa16.32■□□□□ 0.2
CELF1-212ENST00000528538 FGD5Q6ZNL6 1462 aa16.32■□□□□ 0.2
CELF1-212ENST00000528538 RAD54L2Q9Y4B4 1467 aa16.32■□□□□ 0.2
CELF1-212ENST00000528538 TDRD9Q8NDG6 1382 aaKnown RBP16.26■□□□□ 0.19
CELF1-212ENST00000528538 CHD1O14646 1710 aa16.22■□□□□ 0.19
CELF1-212ENST00000528538 ABCA10Q8WWZ4 1543 aa16.19■□□□□ 0.18
CELF1-212ENST00000528538 RIMBP3CA6NJZ7 1639 aa16.19■□□□□ 0.18
CELF1-212ENST00000528538 RIMBP3BA6NNM3 1639 aa16.19■□□□□ 0.18
CELF1-212ENST00000528538 RIMBP3Q9UFD9 1639 aa16.19■□□□□ 0.18
CELF1-212ENST00000528538 GRIN2BQ13224 1484 aa16.18■□□□□ 0.18
CELF1-212ENST00000528538 MAGI1Q96QZ7 1491 aaPredicted RBP16.18■□□□□ 0.18
CELF1-212ENST00000528538 TRIM41Q8WV44 630 aa16.17■□□□□ 0.18
CELF1-212ENST00000528538 SNAPC4Q5SXM2 1469 aa16.16■□□□□ 0.18
CELF1-212ENST00000528538 BIVM-ERCC5R4GMW8 1640 aa16.16■□□□□ 0.18
CELF1-212ENST00000528538 ARHGEF11O15085 1522 aa16.16■□□□□ 0.18
CELF1-212ENST00000528538 TOP2BQ02880 1626 aa16.16■□□□□ 0.18
CELF1-212ENST00000528538 ABCA5Q8WWZ7 1642 aa16.15■□□□□ 0.18
CELF1-212ENST00000528538 GAPVD1Q14C86 1478 aa16.14■□□□□ 0.17
CELF1-212ENST00000528538 WRNQ14191 1432 aaPredicted RBP eCLIP16.13■□□□□ 0.17
CELF1-212ENST00000528538 SYNJ2O15056 1496 aa16.11■□□□□ 0.17
CELF1-212ENST00000528538 SYNJ1O43426 1573 aa16.11■□□□□ 0.17
CELF1-212ENST00000528538 PBRM1Q86U86 1689 aa16.11■□□□□ 0.17
CELF1-212ENST00000528538 CLASP1Q7Z460 1538 aa16.1■□□□□ 0.17
CELF1-212ENST00000528538 FBLN2P98095 1184 aa16.09■□□□□ 0.17
CELF1-212ENST00000528538 CHMP7Q8WUX9 453 aaPredicted RBP16.06■□□□□ 0.16
CELF1-212ENST00000528538 AEBP2Q6ZN18 517 aaPredicted RBP16.05■□□□□ 0.16
CELF1-212ENST00000528538 ARAP1Q96P48 1450 aa16.03■□□□□ 0.16
CELF1-212ENST00000528538 ERICH3Q5RHP9 1530 aa15.99■□□□□ 0.15
CELF1-212ENST00000528538 ADAMTS12P58397 1594 aa15.99■□□□□ 0.15
CELF1-212ENST00000528538 GRIN2AQ12879 1464 aa15.97■□□□□ 0.15
CELF1-212ENST00000528538 CYB5RLQ6IPT4 315 aa15.97■□□□□ 0.15
CELF1-212ENST00000528538 FHAD1B1AJZ9 1412 aa15.95■□□□□ 0.14
CELF1-212ENST00000528538 NUP160Q12769 1436 aa15.95■□□□□ 0.14
CELF1-212ENST00000528538 CEP170Q5SW79 1584 aa15.91■□□□□ 0.14
CELF1-212ENST00000528538 SHROOM2Q13796 1616 aa15.87■□□□□ 0.13
CELF1-212ENST00000528538 CHIC1Q5VXU3 224 aa15.85■□□□□ 0.13
CELF1-212ENST00000528538 IGF1RP08069 1367 aa15.84■□□□□ 0.13
CELF1-212ENST00000528538 ERCC6L2Q5T890 1561 aa15.82■□□□□ 0.12
CELF1-212ENST00000528538 KIF27Q86VH2 1401 aa15.81■□□□□ 0.12
CELF1-212ENST00000528538 CUL7Q14999 1698 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms