RNA–Protein interactions for RNA: ENST00000543178.5

CELF1-221, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 4

Gene CELF1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-221ENST00000543178 NISCHQ9Y2I1 1504 aa23.04■■□□□ 1.28
CELF1-221ENST00000543178 CCDC180Q9P1Z9 1646 aa20.5■□□□□ 0.87
CELF1-221ENST00000543178 ABCC9O60706 1549 aa19.86■□□□□ 0.77
CELF1-221ENST00000543178 NACADO15069 1562 aa19.25■□□□□ 0.67
CELF1-221ENST00000543178 RB1CC1Q8TDY2 1594 aa19.23■□□□□ 0.67
CELF1-221ENST00000543178 MYO15BQ96JP2 1530 aa19.21■□□□□ 0.67
CELF1-221ENST00000543178 ZCCHC6Q5VYS8 1495 aaKnown RBP19.21■□□□□ 0.67
CELF1-221ENST00000543178 DCAF1Q9Y4B6 1507 aa19.14■□□□□ 0.65
CELF1-221ENST00000543178 DCAF8L2P0C7V8 631 aa19.07■□□□□ 0.64
CELF1-221ENST00000543178 UNC13AQ9UPW8 1703 aa18.81■□□□□ 0.6
CELF1-221ENST00000543178 BICRAQ9NZM4 1560 aa18.64■□□□□ 0.58
CELF1-221ENST00000543178 SCRIBQ14160 1630 aa18.6■□□□□ 0.57
CELF1-221ENST00000543178 PABPN1Q86U42 306 aaKnown RBP eCLIP18.54■□□□□ 0.56
CELF1-221ENST00000543178 SHROOM4Q9ULL8 1493 aa18.52■□□□□ 0.56
CELF1-221ENST00000543178 DNAJC5BQ9UF47 199 aa18.18■□□□□ 0.5
CELF1-221ENST00000543178 EIF4G1Q04637 1599 aaKnown RBP18.13■□□□□ 0.49
CELF1-221ENST00000543178 CC2D2AQ9P2K1 1620 aa18.03■□□□□ 0.48
CELF1-221ENST00000543178 CECR2Q9BXF3 1484 aa17.88■□□□□ 0.45
CELF1-221ENST00000543178 BAZ1AQ9NRL2 1556 aaPredicted RBP17.86■□□□□ 0.45
CELF1-221ENST00000543178 SMARCA4P51532 1647 aa17.86■□□□□ 0.45
CELF1-221ENST00000543178 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
CELF1-221ENST00000543178 SMARCA2P51531 1590 aa17.74■□□□□ 0.43
CELF1-221ENST00000543178 ATAD2BQ9ULI0 1458 aa17.74■□□□□ 0.43
CELF1-221ENST00000543178 PEG3Q9GZU2 1588 aa17.74■□□□□ 0.43
CELF1-221ENST00000543178 MROH2BQ7Z745 1585 aa17.72■□□□□ 0.43
CELF1-221ENST00000543178 HMGXB3Q12766 1538 aa17.67■□□□□ 0.42
CELF1-221ENST00000543178 BAZ1BQ9UIG0 1483 aaKnown RBP17.57■□□□□ 0.4
CELF1-221ENST00000543178 RSF1Q96T23 1441 aaPredicted RBP17.55■□□□□ 0.4
CELF1-221ENST00000543178 WIZO95785 1651 aa17.54■□□□□ 0.4
CELF1-221ENST00000543178 TOP2AP11388 1531 aaKnown RBP17.38■□□□□ 0.37
CELF1-221ENST00000543178 LAMC3Q9Y6N6 1575 aa17.27■□□□□ 0.35
CELF1-221ENST00000543178 NESP48681 1621 aa17.21■□□□□ 0.35
CELF1-221ENST00000543178 CADPSQ9ULU8 1353 aa17.21■□□□□ 0.35
CELF1-221ENST00000543178 CCDC88BA6NC98 1476 aa17.15■□□□□ 0.34
CELF1-221ENST00000543178 CFTRP13569 1480 aa17.14■□□□□ 0.33
CELF1-221ENST00000543178 PDS5BQ9NTI5 1447 aa17.13■□□□□ 0.33
CELF1-221ENST00000543178 ERCC6Q03468 1493 aa17.12■□□□□ 0.33
CELF1-221ENST00000543178 KIF21AQ7Z4S6 1674 aa17.07■□□□□ 0.32
CELF1-221ENST00000543178 PRDM2Q13029 1718 aa17.06■□□□□ 0.32
CELF1-221ENST00000543178 SUPT5HO00267 1087 aaKnown RBP17.05■□□□□ 0.32
CELF1-221ENST00000543178 CUX2O14529 1486 aa17■□□□□ 0.31
CELF1-221ENST00000543178 THOC2Q8NI27 1593 aaKnown RBP17■□□□□ 0.31
CELF1-221ENST00000543178 FANCD2Q9BXW9 1451 aa16.99■□□□□ 0.31
CELF1-221ENST00000543178 CEP164Q9UPV0 1460 aa16.97■□□□□ 0.31
CELF1-221ENST00000543178 MRC2Q9UBG0 1479 aa16.93■□□□□ 0.3
CELF1-221ENST00000543178 WDR62O43379 1518 aa16.91■□□□□ 0.3
CELF1-221ENST00000543178 URB2Q14146 1524 aaKnown RBP16.81■□□□□ 0.28
CELF1-221ENST00000543178 ABCC8Q09428 1581 aa16.8■□□□□ 0.28
CELF1-221ENST00000543178 DNMBPQ6XZF7 1577 aa16.74■□□□□ 0.27
CELF1-221ENST00000543178 TOPBP1Q92547 1522 aa16.73■□□□□ 0.27
CELF1-221ENST00000543178 IFT140Q96RY7 1462 aa16.63■□□□□ 0.25
CELF1-221ENST00000543178 CUX1P39880 1505 aa16.62■□□□□ 0.25
CELF1-221ENST00000543178 POLA1P09884 1462 aaPredicted RBP16.6■□□□□ 0.25
CELF1-221ENST00000543178 TARBP1Q13395 1621 aaKnown RBP16.57■□□□□ 0.24
CELF1-221ENST00000543178 FGD5Q6ZNL6 1462 aa16.54■□□□□ 0.24
CELF1-221ENST00000543178 WRNQ14191 1432 aaPredicted RBP eCLIP16.54■□□□□ 0.24
CELF1-221ENST00000543178 BIVM-ERCC5R4GMW8 1640 aa16.54■□□□□ 0.24
CELF1-221ENST00000543178 TOP2BQ02880 1626 aa16.53■□□□□ 0.24
CELF1-221ENST00000543178 SOGA1O94964 1423 aa16.52■□□□□ 0.23
CELF1-221ENST00000543178 WDR97A6NE52 1622 aa16.51■□□□□ 0.23
CELF1-221ENST00000543178 ZNF608Q9ULD9 1512 aaPredicted RBP16.5■□□□□ 0.23
CELF1-221ENST00000543178 SYNJ1O43426 1573 aa16.49■□□□□ 0.23
CELF1-221ENST00000543178 RAD54L2Q9Y4B4 1467 aa16.48■□□□□ 0.23
CELF1-221ENST00000543178 EIF4G3O43432 1585 aaKnown RBP16.47■□□□□ 0.23
CELF1-221ENST00000543178 ABCA10Q8WWZ4 1543 aa16.44■□□□□ 0.22
CELF1-221ENST00000543178 AQRO60306 1485 aaKnown RBP eCLIP16.41■□□□□ 0.22
CELF1-221ENST00000543178 TDRD9Q8NDG6 1382 aaKnown RBP16.38■□□□□ 0.21
CELF1-221ENST00000543178 DNAJC5Q9H3Z4 198 aa16.37■□□□□ 0.21
CELF1-221ENST00000543178 ABCA5Q8WWZ7 1642 aa16.36■□□□□ 0.21
CELF1-221ENST00000543178 GRIN2BQ13224 1484 aa16.34■□□□□ 0.21
CELF1-221ENST00000543178 GAPVD1Q14C86 1478 aa16.34■□□□□ 0.21
CELF1-221ENST00000543178 PBRM1Q86U86 1689 aa16.32■□□□□ 0.2
CELF1-221ENST00000543178 MAGI1Q96QZ7 1491 aaPredicted RBP16.3■□□□□ 0.2
CELF1-221ENST00000543178 OSCARQ8IYS5 282 aa16.27■□□□□ 0.2
CELF1-221ENST00000543178 SNAPC4Q5SXM2 1469 aa16.27■□□□□ 0.19
CELF1-221ENST00000543178 CHD1O14646 1710 aa16.25■□□□□ 0.19
CELF1-221ENST00000543178 ERICH3Q5RHP9 1530 aa16.25■□□□□ 0.19
CELF1-221ENST00000543178 SYNJ2O15056 1496 aa16.22■□□□□ 0.19
CELF1-221ENST00000543178 KIF27Q86VH2 1401 aa16.2■□□□□ 0.18
CELF1-221ENST00000543178 ADAMTS12P58397 1594 aa16.18■□□□□ 0.18
CELF1-221ENST00000543178 CHMP7Q8WUX9 453 aaPredicted RBP16.17■□□□□ 0.18
CELF1-221ENST00000543178 TRIM41Q8WV44 630 aa16.16■□□□□ 0.18
CELF1-221ENST00000543178 FHAD1B1AJZ9 1412 aa16.16■□□□□ 0.18
CELF1-221ENST00000543178 FBLN2P98095 1184 aa16.15■□□□□ 0.18
CELF1-221ENST00000543178 IGF1RP08069 1367 aa16.13■□□□□ 0.17
CELF1-221ENST00000543178 GRIN2AQ12879 1464 aa16.12■□□□□ 0.17
CELF1-221ENST00000543178 CUL7Q14999 1698 aa16.11■□□□□ 0.17
CELF1-221ENST00000543178 CLASP1Q7Z460 1538 aa16.09■□□□□ 0.17
CELF1-221ENST00000543178 NUP160Q12769 1436 aa16.07■□□□□ 0.16
CELF1-221ENST00000543178 CEP170Q5SW79 1584 aa16.03■□□□□ 0.16
CELF1-221ENST00000543178 RUSC2Q8N2Y8 1516 aa16.03■□□□□ 0.16
CELF1-221ENST00000543178 CARMIL1Q5VZK9 1371 aa16.02■□□□□ 0.16
CELF1-221ENST00000543178 CHIC1Q5VXU3 224 aa16.02■□□□□ 0.16
CELF1-221ENST00000543178 RIMBP3CA6NJZ7 1639 aa16.01■□□□□ 0.15
CELF1-221ENST00000543178 RIMBP3BA6NNM3 1639 aa16.01■□□□□ 0.15
CELF1-221ENST00000543178 RIMBP3Q9UFD9 1639 aa16.01■□□□□ 0.15
CELF1-221ENST00000543178 ARHGEF11O15085 1522 aa16■□□□□ 0.15
CELF1-221ENST00000543178 EEA1Q15075 1411 aa15.97■□□□□ 0.15
CELF1-221ENST00000543178 SHROOM2Q13796 1616 aa15.97■□□□□ 0.15
CELF1-221ENST00000543178 RAPGEF2Q9Y4G8 1499 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms