RNA–Protein interactions for RNA: ENST00000395841.6

RAE1-203, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-203ENST00000395841 NISCHQ9Y2I1 1504 aa24.07■■□□□ 1.44
RAE1-203ENST00000395841 CCDC180Q9P1Z9 1646 aa20.64■□□□□ 0.89
RAE1-203ENST00000395841 ZCCHC6Q5VYS8 1495 aaKnown RBP20.33■□□□□ 0.85
RAE1-203ENST00000395841 DCAF8L2P0C7V8 631 aa20.26■□□□□ 0.83
RAE1-203ENST00000395841 SHROOM4Q9ULL8 1493 aa20.16■□□□□ 0.82
RAE1-203ENST00000395841 DCAF1Q9Y4B6 1507 aa19.86■□□□□ 0.77
RAE1-203ENST00000395841 ABCC9O60706 1549 aa19.8■□□□□ 0.76
RAE1-203ENST00000395841 SUPT5HO00267 1087 aaKnown RBP19.67■□□□□ 0.74
RAE1-203ENST00000395841 MYO15BQ96JP2 1530 aa19.39■□□□□ 0.7
RAE1-203ENST00000395841 SCRIBQ14160 1630 aa19.32■□□□□ 0.68
RAE1-203ENST00000395841 NACADO15069 1562 aa19.16■□□□□ 0.66
RAE1-203ENST00000395841 CHIC1Q5VXU3 224 aa19.11■□□□□ 0.65
RAE1-203ENST00000395841 RB1CC1Q8TDY2 1594 aa19.02■□□□□ 0.63
RAE1-203ENST00000395841 RSF1Q96T23 1441 aaPredicted RBP18.93■□□□□ 0.62
RAE1-203ENST00000395841 PABPN1Q86U42 306 aaKnown RBP eCLIP18.87■□□□□ 0.61
RAE1-203ENST00000395841 CECR2Q9BXF3 1484 aa18.81■□□□□ 0.6
RAE1-203ENST00000395841 UNC13AQ9UPW8 1703 aa18.77■□□□□ 0.59
RAE1-203ENST00000395841 MROH2BQ7Z745 1585 aa18.65■□□□□ 0.58
RAE1-203ENST00000395841 BICRAQ9NZM4 1560 aa18.58■□□□□ 0.56
RAE1-203ENST00000395841 BAZ1AQ9NRL2 1556 aaPredicted RBP18.53■□□□□ 0.56
RAE1-203ENST00000395841 WIZO95785 1651 aa18.51■□□□□ 0.55
RAE1-203ENST00000395841 LOC105371045A0A1W2PR82 267 aa18.44■□□□□ 0.54
RAE1-203ENST00000395841 TRIM41Q8WV44 630 aa18.42■□□□□ 0.54
RAE1-203ENST00000395841 SMARCA4P51532 1647 aa18.37■□□□□ 0.53
RAE1-203ENST00000395841 TOP2AP11388 1531 aaKnown RBP18.31■□□□□ 0.52
RAE1-203ENST00000395841 EIF4G1Q04637 1599 aaKnown RBP18.25■□□□□ 0.51
RAE1-203ENST00000395841 PCGF6Q9BYE7 350 aa18.21■□□□□ 0.51
RAE1-203ENST00000395841 CCDC88BA6NC98 1476 aa18.18■□□□□ 0.5
RAE1-203ENST00000395841 SMARCA2P51531 1590 aa18.17■□□□□ 0.5
RAE1-203ENST00000395841 FAM9AQ8IZU1 332 aaPredicted RBP18.15■□□□□ 0.5
RAE1-203ENST00000395841 HRCP23327 699 aa18.14■□□□□ 0.49
RAE1-203ENST00000395841 PEG3Q9GZU2 1588 aa18.09■□□□□ 0.49
RAE1-203ENST00000395841 ATAD2BQ9ULI0 1458 aa18.05■□□□□ 0.48
RAE1-203ENST00000395841 TRIM26Q12899 539 aaPredicted RBP18.02■□□□□ 0.48
RAE1-203ENST00000395841 EHMT2Q96KQ7 1210 aa18.01■□□□□ 0.47
RAE1-203ENST00000395841 ABCC8Q09428 1581 aa17.99■□□□□ 0.47
RAE1-203ENST00000395841 BAZ1BQ9UIG0 1483 aaKnown RBP17.97■□□□□ 0.47
RAE1-203ENST00000395841 EEA1Q15075 1411 aa17.81■□□□□ 0.44
RAE1-203ENST00000395841 SOGA1O94964 1423 aa17.79■□□□□ 0.44
RAE1-203ENST00000395841 WRNQ14191 1432 aaPredicted RBP eCLIP17.79■□□□□ 0.44
RAE1-203ENST00000395841 NCAPD3P42695 1498 aa17.76■□□□□ 0.43
RAE1-203ENST00000395841 CC2D2AQ9P2K1 1620 aa17.74■□□□□ 0.43
RAE1-203ENST00000395841 CSRNP3Q8WYN3 585 aa17.71■□□□□ 0.43
RAE1-203ENST00000395841 DNAJC5BQ9UF47 199 aa17.71■□□□□ 0.43
RAE1-203ENST00000395841 SYNJ1O43426 1573 aa17.69■□□□□ 0.42
RAE1-203ENST00000395841 RUSC2Q8N2Y8 1516 aa17.69■□□□□ 0.42
RAE1-203ENST00000395841 TNIKQ9UKE5 1360 aa17.68■□□□□ 0.42
RAE1-203ENST00000395841 HMGXB3Q12766 1538 aa17.68■□□□□ 0.42
RAE1-203ENST00000395841 PPARGC1BQ86YN6 1023 aaKnown RBP17.67■□□□□ 0.42
RAE1-203ENST00000395841 CEP162Q5TB80 1403 aa17.64■□□□□ 0.42
RAE1-203ENST00000395841 GOLGA3Q08378 1498 aa17.62■□□□□ 0.41
RAE1-203ENST00000395841 ZEB1P37275 1124 aaPredicted RBP17.59■□□□□ 0.41
RAE1-203ENST00000395841 UBTFP17480 764 aaKnown RBP17.56■□□□□ 0.4
RAE1-203ENST00000395841 CEP164Q9UPV0 1460 aa17.55■□□□□ 0.4
RAE1-203ENST00000395841 TOP2BQ02880 1626 aa17.55■□□□□ 0.4
RAE1-203ENST00000395841 KIF21BO75037 1637 aa17.54■□□□□ 0.4
RAE1-203ENST00000395841 BIVM-ERCC5R4GMW8 1640 aa17.5■□□□□ 0.39
RAE1-203ENST00000395841 CFTRP13569 1480 aa17.46■□□□□ 0.39
RAE1-203ENST00000395841 NESP48681 1621 aa17.45■□□□□ 0.38
RAE1-203ENST00000395841 CADPSQ9ULU8 1353 aa17.42■□□□□ 0.38
RAE1-203ENST00000395841 RAPGEF2Q9Y4G8 1499 aa17.39■□□□□ 0.37
RAE1-203ENST00000395841 CUX1P39880 1505 aa17.39■□□□□ 0.37
RAE1-203ENST00000395841 CLIP1P30622 1438 aa17.37■□□□□ 0.37
RAE1-203ENST00000395841 RANGAP1P46060 587 aaPredicted RBP17.32■□□□□ 0.36
RAE1-203ENST00000395841 ERICH3Q5RHP9 1530 aa17.32■□□□□ 0.36
RAE1-203ENST00000395841 PRXQ9BXM0 1461 aa17.31■□□□□ 0.36
RAE1-203ENST00000395841 PRDM2Q13029 1718 aa17.31■□□□□ 0.36
RAE1-203ENST00000395841 VPS8Q8N3P4 1428 aa17.3■□□□□ 0.36
RAE1-203ENST00000395841 TTBK1Q5TCY1 1321 aaPredicted RBP17.29■□□□□ 0.36
RAE1-203ENST00000395841 KIF27Q86VH2 1401 aa17.28■□□□□ 0.36
RAE1-203ENST00000395841 FANCD2Q9BXW9 1451 aa17.27■□□□□ 0.36
RAE1-203ENST00000395841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.25■□□□□ 0.35
RAE1-203ENST00000395841 CCER1Q8TC90 406 aaPredicted RBP17.23■□□□□ 0.35
RAE1-203ENST00000395841 APLP2Q06481 763 aa17.16■□□□□ 0.34
RAE1-203ENST00000395841 FGD5Q6ZNL6 1462 aa17.16■□□□□ 0.34
RAE1-203ENST00000395841 RAD54L2Q9Y4B4 1467 aa17.13■□□□□ 0.33
RAE1-203ENST00000395841 ARAP1Q96P48 1450 aa17.13■□□□□ 0.33
RAE1-203ENST00000395841 CUX2O14529 1486 aa17.12■□□□□ 0.33
RAE1-203ENST00000395841 IGF1RP08069 1367 aa17.09■□□□□ 0.33
RAE1-203ENST00000395841 LAMC3Q9Y6N6 1575 aa17.08■□□□□ 0.33
RAE1-203ENST00000395841 URB2Q14146 1524 aaKnown RBP17.08■□□□□ 0.32
RAE1-203ENST00000395841 TOPBP1Q92547 1522 aa17.08■□□□□ 0.32
RAE1-203ENST00000395841 KIF21AQ7Z4S6 1674 aa17.06■□□□□ 0.32
RAE1-203ENST00000395841 POLA1P09884 1462 aaPredicted RBP17.04■□□□□ 0.32
RAE1-203ENST00000395841 PDS5BQ9NTI5 1447 aa17.04■□□□□ 0.32
RAE1-203ENST00000395841 DNMBPQ6XZF7 1577 aa17.02■□□□□ 0.32
RAE1-203ENST00000395841 ARHGAP35Q9NRY4 1499 aa17.01■□□□□ 0.31
RAE1-203ENST00000395841 CARMIL1Q5VZK9 1371 aa17.01■□□□□ 0.31
RAE1-203ENST00000395841 HNRNPUL2Q1KMD3 747 aaKnown RBP16.99■□□□□ 0.31
RAE1-203ENST00000395841 TDRD9Q8NDG6 1382 aaKnown RBP16.99■□□□□ 0.31
RAE1-203ENST00000395841 ABCA10Q8WWZ4 1543 aa16.95■□□□□ 0.3
RAE1-203ENST00000395841 KANK4Q5T7N3 995 aaPredicted RBP16.93■□□□□ 0.3
RAE1-203ENST00000395841 RRBP1Q9P2E9 1410 aaKnown RBP16.87■□□□□ 0.29
RAE1-203ENST00000395841 P3H3Q8IVL6 736 aa16.86■□□□□ 0.29
RAE1-203ENST00000395841 MAP3K1Q13233 1512 aa16.86■□□□□ 0.29
RAE1-203ENST00000395841 ERCC6Q03468 1493 aa16.85■□□□□ 0.29
RAE1-203ENST00000395841 CUL7Q14999 1698 aa16.84■□□□□ 0.29
RAE1-203ENST00000395841 AQRO60306 1485 aaKnown RBP eCLIP16.83■□□□□ 0.288e-8■■■■■ 32.1
RAE1-203ENST00000395841 MRC2Q9UBG0 1479 aa16.82■□□□□ 0.28
RAE1-203ENST00000395841 TIAM1Q13009 1591 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms