RNA–Protein interactions for RNA: ENST00000343788.10

SUGT1-202, Transcript of SGT1 homolog, MIS12 kinetochore complex assembly cochaperone, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SUGT1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGT1-202ENST00000343788 NISCHQ9Y2I1 1504 aa29.46■■■□□ 2.31
SUGT1-202ENST00000343788 ABCC9O60706 1549 aa27.36■■□□□ 1.97
SUGT1-202ENST00000343788 CCDC180Q9P1Z9 1646 aa26.65■■□□□ 1.86
SUGT1-202ENST00000343788 DNAJC5BQ9UF47 199 aa26.32■■□□□ 1.8
SUGT1-202ENST00000343788 RB1CC1Q8TDY2 1594 aa25.69■■□□□ 1.7
SUGT1-202ENST00000343788 PABPN1Q86U42 306 aaKnown RBP eCLIP25.41■■□□□ 1.66
SUGT1-202ENST00000343788 NACADO15069 1562 aa25.37■■□□□ 1.65
SUGT1-202ENST00000343788 DCAF8L2P0C7V8 631 aa25.19■■□□□ 1.62
SUGT1-202ENST00000343788 UNC13AQ9UPW8 1703 aa25.13■■□□□ 1.61
SUGT1-202ENST00000343788 BICRAQ9NZM4 1560 aa25.03■■□□□ 1.6
SUGT1-202ENST00000343788 MYO15BQ96JP2 1530 aa24.81■■□□□ 1.56
SUGT1-202ENST00000343788 CECR2Q9BXF3 1484 aa24.7■■□□□ 1.54
SUGT1-202ENST00000343788 CC2D2AQ9P2K1 1620 aa24.65■■□□□ 1.54
SUGT1-202ENST00000343788 DNAJC5Q9H3Z4 198 aa24.57■■□□□ 1.52
SUGT1-202ENST00000343788 SHROOM4Q9ULL8 1493 aa24.54■■□□□ 1.52
SUGT1-202ENST00000343788 EIF4G1Q04637 1599 aaKnown RBP24.44■■□□□ 1.5
SUGT1-202ENST00000343788 SCRIBQ14160 1630 aa24.29■■□□□ 1.48
SUGT1-202ENST00000343788 ZCCHC6Q5VYS8 1495 aaKnown RBP24.27■■□□□ 1.48
SUGT1-202ENST00000343788 DCAF1Q9Y4B6 1507 aa24.27■■□□□ 1.48
SUGT1-202ENST00000343788 CUX2O14529 1486 aa23.79■■□□□ 1.4
SUGT1-202ENST00000343788 ERCC6Q03468 1493 aa23.62■■□□□ 1.37
SUGT1-202ENST00000343788 NCAPD3P42695 1498 aa23.48■■□□□ 1.35
SUGT1-202ENST00000343788 NESP48681 1621 aa23.34■■□□□ 1.33
SUGT1-202ENST00000343788 ATAD2BQ9ULI0 1458 aa23.31■■□□□ 1.32
SUGT1-202ENST00000343788 TRIM41Q8WV44 630 aa23.22■■□□□ 1.31
SUGT1-202ENST00000343788 HMGXB3Q12766 1538 aa23.19■■□□□ 1.3
SUGT1-202ENST00000343788 THOC2Q8NI27 1593 aaKnown RBP23.18■■□□□ 1.3
SUGT1-202ENST00000343788 SMARCA2P51531 1590 aa23.16■■□□□ 1.3
SUGT1-202ENST00000343788 SMARCA4P51532 1647 aa23.11■■□□□ 1.29
SUGT1-202ENST00000343788 BAZ1BQ9UIG0 1483 aaKnown RBP23.03■■□□□ 1.28
SUGT1-202ENST00000343788 LAMC3Q9Y6N6 1575 aa23■■□□□ 1.27
SUGT1-202ENST00000343788 KIF21AQ7Z4S6 1674 aa22.96■■□□□ 1.27
SUGT1-202ENST00000343788 PDS5BQ9NTI5 1447 aa22.91■■□□□ 1.26
SUGT1-202ENST00000343788 PEG3Q9GZU2 1588 aa22.88■■□□□ 1.25
SUGT1-202ENST00000343788 BAZ1AQ9NRL2 1556 aaPredicted RBP22.88■■□□□ 1.25
SUGT1-202ENST00000343788 MRC2Q9UBG0 1479 aa22.75■■□□□ 1.23
SUGT1-202ENST00000343788 CADPSQ9ULU8 1353 aa22.74■■□□□ 1.23
SUGT1-202ENST00000343788 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
SUGT1-202ENST00000343788 WDR62O43379 1518 aa22.72■■□□□ 1.23
SUGT1-202ENST00000343788 OSCARQ8IYS5 282 aa22.64■■□□□ 1.21
SUGT1-202ENST00000343788 CEP164Q9UPV0 1460 aa22.52■■□□□ 1.2
SUGT1-202ENST00000343788 FANCD2Q9BXW9 1451 aa22.47■■□□□ 1.19
SUGT1-202ENST00000343788 WIZO95785 1651 aa22.4■■□□□ 1.18
SUGT1-202ENST00000343788 AEBP2Q6ZN18 517 aaPredicted RBP22.4■■□□□ 1.18
SUGT1-202ENST00000343788 RIMBP3CA6NJZ7 1639 aa22.39■■□□□ 1.18
SUGT1-202ENST00000343788 RIMBP3BA6NNM3 1639 aa22.39■■□□□ 1.18
SUGT1-202ENST00000343788 RIMBP3Q9UFD9 1639 aa22.39■■□□□ 1.18
SUGT1-202ENST00000343788 URB2Q14146 1524 aaKnown RBP22.34■■□□□ 1.17
SUGT1-202ENST00000343788 CFTRP13569 1480 aa22.34■■□□□ 1.17
SUGT1-202ENST00000343788 ARHGEF11O15085 1522 aa22.26■■□□□ 1.15
SUGT1-202ENST00000343788 ZNF608Q9ULD9 1512 aaPredicted RBP22.18■■□□□ 1.14
SUGT1-202ENST00000343788 CYB5RLQ6IPT4 315 aa22.18■■□□□ 1.14
SUGT1-202ENST00000343788 TRHP20396 242 aaPredicted RBP22.11■■□□□ 1.13
SUGT1-202ENST00000343788 IFT140Q96RY7 1462 aa22.1■■□□□ 1.13
SUGT1-202ENST00000343788 TOP2AP11388 1531 aaKnown RBP22.04■■□□□ 1.12
SUGT1-202ENST00000343788 RSF1Q96T23 1441 aaPredicted RBP22.03■■□□□ 1.12
SUGT1-202ENST00000343788 ARAP1Q96P48 1450 aa22.02■■□□□ 1.12
SUGT1-202ENST00000343788 PRDM2Q13029 1718 aa21.97■■□□□ 1.11
SUGT1-202ENST00000343788 TOPBP1Q92547 1522 aa21.97■■□□□ 1.11
SUGT1-202ENST00000343788 EIF4G3O43432 1585 aaKnown RBP21.97■■□□□ 1.11
SUGT1-202ENST00000343788 CHD1O14646 1710 aa21.92■■□□□ 1.1
SUGT1-202ENST00000343788 AQRO60306 1485 aaKnown RBP eCLIP21.9■■□□□ 1.16e-9■■■■■ 37.6
SUGT1-202ENST00000343788 FBLN2P98095 1184 aa21.88■■□□□ 1.09
SUGT1-202ENST00000343788 CCDC88BA6NC98 1476 aa21.85■■□□□ 1.09
SUGT1-202ENST00000343788 ABCC8Q09428 1581 aa21.83■■□□□ 1.09
SUGT1-202ENST00000343788 TARBP1Q13395 1621 aaKnown RBP21.82■■□□□ 1.08
SUGT1-202ENST00000343788 DNMBPQ6XZF7 1577 aa21.81■■□□□ 1.08
SUGT1-202ENST00000343788 POLA1P09884 1462 aaPredicted RBP21.71■■□□□ 1.07
SUGT1-202ENST00000343788 CLASP1Q7Z460 1538 aa21.68■■□□□ 1.06
SUGT1-202ENST00000343788 RAD54L2Q9Y4B4 1467 aa21.67■■□□□ 1.06
SUGT1-202ENST00000343788 TDRD9Q8NDG6 1382 aaKnown RBP21.67■■□□□ 1.06
SUGT1-202ENST00000343788 SNAPC4Q5SXM2 1469 aa21.63■■□□□ 1.05
SUGT1-202ENST00000343788 SOGA1O94964 1423 aa21.61■■□□□ 1.05
SUGT1-202ENST00000343788 CHMP7Q8WUX9 453 aaPredicted RBP21.6■■□□□ 1.05
SUGT1-202ENST00000343788 SYNJ1O43426 1573 aa21.57■■□□□ 1.04
SUGT1-202ENST00000343788 MAGI1Q96QZ7 1491 aaPredicted RBP21.52■■□□□ 1.03
SUGT1-202ENST00000343788 GAPVD1Q14C86 1478 aa21.51■■□□□ 1.03
SUGT1-202ENST00000343788 WDR97A6NE52 1622 aa21.49■■□□□ 1.03
SUGT1-202ENST00000343788 FGD5Q6ZNL6 1462 aa21.48■■□□□ 1.03
SUGT1-202ENST00000343788 SYNJ2O15056 1496 aa21.47■■□□□ 1.03
SUGT1-202ENST00000343788 CHIC1Q5VXU3 224 aa21.47■■□□□ 1.03
SUGT1-202ENST00000343788 GRIN2BQ13224 1484 aa21.46■■□□□ 1.03
SUGT1-202ENST00000343788 CUX1P39880 1505 aa21.38■■□□□ 1.01
SUGT1-202ENST00000343788 ERCC6L2Q5T890 1561 aa21.34■■□□□ 1.01
SUGT1-202ENST00000343788 PBRM1Q86U86 1689 aa21.31■■□□□ 1
SUGT1-202ENST00000343788 CEP170Q5SW79 1584 aa21.21■□□□□ 0.99
SUGT1-202ENST00000343788 ABCA5Q8WWZ7 1642 aa21.21■□□□□ 0.99
SUGT1-202ENST00000343788 GRIN2AQ12879 1464 aa21.2■□□□□ 0.98
SUGT1-202ENST00000343788 KIF13AQ9H1H9 1805 aa21.19■□□□□ 0.98
SUGT1-202ENST00000343788 ABCA10Q8WWZ4 1543 aa21.19■□□□□ 0.98
SUGT1-202ENST00000343788 NUP160Q12769 1436 aa21.16■□□□□ 0.98
SUGT1-202ENST00000343788 SHROOM2Q13796 1616 aa21.12■□□□□ 0.97
SUGT1-202ENST00000343788 ADAMTS12P58397 1594 aa21.09■□□□□ 0.97
SUGT1-202ENST00000343788 ILDR1Q86SU0 546 aaPredicted RBP21.08■□□□□ 0.97
SUGT1-202ENST00000343788 KDM4FA0A1W2PPD8 638 aa21.07■□□□□ 0.96
SUGT1-202ENST00000343788 FAM69CQ0P6D2 419 aa21.05■□□□□ 0.96
SUGT1-202ENST00000343788 FHAD1B1AJZ9 1412 aa21.02■□□□□ 0.96
SUGT1-202ENST00000343788 PRG4Q92954 1404 aaPredicted RBP21.02■□□□□ 0.96
SUGT1-202ENST00000343788 ABCC10Q5T3U5 1492 aa21.01■□□□□ 0.95
SUGT1-202ENST00000343788 WRNQ14191 1432 aaPredicted RBP eCLIP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms