RNA–Protein interactions for RNA: ENST00000485946.1

PCCA-209, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 2

Gene PCCA, Length 1,789 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-209ENST00000485946 POTEDQ86YR6 584 aa16.87■□□□□ 0.29
PCCA-209ENST00000485946 AEBP2Q6ZN18 517 aaPredicted RBP16.83■□□□□ 0.28
PCCA-209ENST00000485946 CHIC1Q5VXU3 224 aa16.1■□□□□ 0.17
PCCA-209ENST00000485946 SENP3Q9H4L4 574 aaPredicted RBP15.05■□□□□ -0
PCCA-209ENST00000485946 PHF23Q9BUL5 403 aaPredicted RBP14.39□□□□□ -0.11
PCCA-209ENST00000485946 MSH5O43196 834 aa14.17□□□□□ -0.14
PCCA-209ENST00000485946 FOXD1Q16676 465 aa14.01□□□□□ -0.17
PCCA-209ENST00000485946 CACNB1Q02641 598 aaPredicted RBP13.22□□□□□ -0.29
PCCA-209ENST00000485946 POTEHQ6S545 545 aa12.89□□□□□ -0.35
PCCA-209ENST00000485946 SLC24A1O60721 1099 aa12.86□□□□□ -0.35
PCCA-209ENST00000485946 PIAS4Q8N2W9 510 aaPredicted RBP12.7□□□□□ -0.38
PCCA-209ENST00000485946 NISCHQ9Y2I1 1504 aa12.61□□□□□ -0.39
PCCA-209ENST00000485946 PLPPR3Q6T4P5 718 aa12.59□□□□□ -0.39
PCCA-209ENST00000485946 PPP6R1Q9UPN7 881 aa12.35□□□□□ -0.43
PCCA-209ENST00000485946 ADRA2BP18089 450 aa12.32□□□□□ -0.44
PCCA-209ENST00000485946 EHMT2Q96KQ7 1210 aa12.04□□□□□ -0.48
PCCA-209ENST00000485946 RNF39Q9H2S5 420 aa11.73□□□□□ -0.53
PCCA-209ENST00000485946 RTN4Q9NQC3 1192 aaKnown RBP11.62□□□□□ -0.55
PCCA-209ENST00000485946 C1QBPQ07021 282 aaKnown RBP11.62□□□□□ -0.55
PCCA-209ENST00000485946 DAXXQ9UER7 740 aaPredicted RBP11.6□□□□□ -0.55
PCCA-209ENST00000485946 DMRT2Q9Y5R5 561 aa11.54□□□□□ -0.56
PCCA-209ENST00000485946 NCBP3Q53F19 620 aaKnown RBP11.51□□□□□ -0.57
PCCA-209ENST00000485946 AMER1Q5JTC6 1135 aaPredicted RBP11.45□□□□□ -0.58
PCCA-209ENST00000485946 PLSCR2Q9NRY7 297 aa11.42□□□□□ -0.58
PCCA-209ENST00000485946 CCDC180Q9P1Z9 1646 aa11.41□□□□□ -0.58
PCCA-209ENST00000485946 MAPK8IP2Q13387 824 aaPredicted RBP11.33□□□□□ -0.59
PCCA-209ENST00000485946 SCAF1Q9H7N4 1312 aaKnown RBP11.33□□□□□ -0.6
PCCA-209ENST00000485946 CSRNP3Q8WYN3 585 aa11.29□□□□□ -0.6
PCCA-209ENST00000485946 KCNA4P22459 653 aa11.28□□□□□ -0.6
PCCA-209ENST00000485946 SP7Q8TDD2 431 aaPredicted RBP11.21□□□□□ -0.61
PCCA-209ENST00000485946 DCAF8L1A6NGE4 600 aa11.1□□□□□ -0.63
PCCA-209ENST00000485946 PRKCSHP14314 528 aaPredicted RBP11.05□□□□□ -0.64
PCCA-209ENST00000485946 PPP4R3CPQ6ZMV5 832 aa11.02□□□□□ -0.65
PCCA-209ENST00000485946 ARXQ96QS3 562 aa11.02□□□□□ -0.65
PCCA-209ENST00000485946 ABCC9O60706 1549 aa10.94□□□□□ -0.66
PCCA-209ENST00000485946 TTBK1Q5TCY1 1321 aaPredicted RBP10.93□□□□□ -0.66
PCCA-209ENST00000485946 APLP2Q06481 763 aa10.88□□□□□ -0.67
PCCA-209ENST00000485946 HOXD11P31277 338 aaPredicted RBP10.85□□□□□ -0.67
PCCA-209ENST00000485946 TIMELESSQ9UNS1 1208 aa10.85□□□□□ -0.67
PCCA-209ENST00000485946 CNKSR2Q8WXI2 1034 aa10.84□□□□□ -0.67
PCCA-209ENST00000485946 PELP1Q8IZL8 1130 aaKnown RBP10.81□□□□□ -0.68
PCCA-209ENST00000485946 TAOK2Q9UL54 1235 aa10.79□□□□□ -0.68
PCCA-209ENST00000485946 MYT1Q01538 1121 aa10.77□□□□□ -0.69
PCCA-209ENST00000485946 RNF216Q9NWF9 866 aaPredicted RBP10.76□□□□□ -0.69
PCCA-209ENST00000485946 SLC4A1APQ9BWU0 796 aaKnown RBP10.73□□□□□ -0.69
PCCA-209ENST00000485946 RB1CC1Q8TDY2 1594 aa10.69□□□□□ -0.7
PCCA-209ENST00000485946 ERICH6Q7L0X2 663 aa10.69□□□□□ -0.7
PCCA-209ENST00000485946 TULP1O00294 542 aaPredicted RBP10.68□□□□□ -0.7
PCCA-209ENST00000485946 BCANQ96GW7 911 aa10.68□□□□□ -0.7
PCCA-209ENST00000485946 NACADO15069 1562 aa10.68□□□□□ -0.7
PCCA-209ENST00000485946 HOMEZQ8IX15 550 aa10.65□□□□□ -0.71
PCCA-209ENST00000485946 DNAJC5BQ9UF47 199 aa10.65□□□□□ -0.71
PCCA-209ENST00000485946 MYO15BQ96JP2 1530 aa10.64□□□□□ -0.71
PCCA-209ENST00000485946 RANGAP1P46060 587 aaPredicted RBP10.61□□□□□ -0.71
PCCA-209ENST00000485946 TPRNQ4KMQ1 711 aa10.57□□□□□ -0.72
PCCA-209ENST00000485946 DCAF1Q9Y4B6 1507 aa10.55□□□□□ -0.72
PCCA-209ENST00000485946 PLCB2Q00722 1185 aa10.52□□□□□ -0.73
PCCA-209ENST00000485946 ZCCHC6Q5VYS8 1495 aaKnown RBP10.5□□□□□ -0.73
PCCA-209ENST00000485946 CHRDL2Q6WN34 429 aa10.49□□□□□ -0.73
PCCA-209ENST00000485946 LHX8Q68G74 356 aa10.48□□□□□ -0.73
PCCA-209ENST00000485946 UNC13AQ9UPW8 1703 aa10.48□□□□□ -0.73
PCCA-209ENST00000485946 GTF3C3Q9Y5Q9 886 aa10.42□□□□□ -0.74
PCCA-209ENST00000485946 NPM3O75607 178 aaKnown RBP10.41□□□□□ -0.74
PCCA-209ENST00000485946 DCAF8L2P0C7V8 631 aa10.37□□□□□ -0.75
PCCA-209ENST00000485946 HAP1P54257 671 aaPredicted RBP10.36□□□□□ -0.75
PCCA-209ENST00000485946 KLHL34Q8N239 644 aa10.36□□□□□ -0.75
PCCA-209ENST00000485946 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.36□□□□□ -0.75
PCCA-209ENST00000485946 PODXL2Q9NZ53 605 aa10.36□□□□□ -0.75
PCCA-209ENST00000485946 SHROOM4Q9ULL8 1493 aa10.36□□□□□ -0.75
PCCA-209ENST00000485946 ZBTB22O15209 634 aa10.31□□□□□ -0.76
PCCA-209ENST00000485946 DSG3P32926 999 aa10.29□□□□□ -0.76
PCCA-209ENST00000485946 BICRAQ9NZM4 1560 aa10.27□□□□□ -0.76
PCCA-209ENST00000485946 PCDH10Q9P2E7 1040 aa10.21□□□□□ -0.77
PCCA-209ENST00000485946 VSIG10Q8N0Z9 540 aa10.21□□□□□ -0.78
PCCA-209ENST00000485946 SCRIBQ14160 1630 aa10.2□□□□□ -0.78
PCCA-209ENST00000485946 TMEM132AQ24JP5 1023 aa10.19□□□□□ -0.78
PCCA-209ENST00000485946 HAX1O00165 279 aa10.17□□□□□ -0.78
PCCA-209ENST00000485946 RBM42Q9BTD8 480 aaKnown RBP10.17□□□□□ -0.78
PCCA-209ENST00000485946 EIF5BO60841 1220 aaKnown RBP10.16□□□□□ -0.78
PCCA-209ENST00000485946 NPM2Q86SE8 214 aaKnown RBP10.14□□□□□ -0.79
PCCA-209ENST00000485946 PABPN1Q86U42 306 aaKnown RBP eCLIP10.11□□□□□ -0.79
PCCA-209ENST00000485946 U3KPZ7 1027 aaPredicted RBP10.1□□□□□ -0.79
PCCA-209ENST00000485946 C14orf37Q86TY3 774 aa10.08□□□□□ -0.8
PCCA-209ENST00000485946 FKBP8Q14318 412 aa10.07□□□□□ -0.8
PCCA-209ENST00000485946 FBXO3Q9UK99 471 aa10.06□□□□□ -0.8
PCCA-209ENST00000485946 EIF4G1Q04637 1599 aaKnown RBP10.03□□□□□ -0.8
PCCA-209ENST00000485946 KDM2AQ9Y2K7 1162 aa10.03□□□□□ -0.8
PCCA-209ENST00000485946 CC2D2AQ9P2K1 1620 aa10□□□□□ -0.81
PCCA-209ENST00000485946 CAPN15O75808 1086 aa9.98□□□□□ -0.81
PCCA-209ENST00000485946 SPINK5Q9NQ38 1064 aaPredicted RBP9.98□□□□□ -0.81
PCCA-209ENST00000485946 SLC4A2P04920 1241 aa9.95□□□□□ -0.82
PCCA-209ENST00000485946 POTEMA6NI47 508 aa9.94□□□□□ -0.82
PCCA-209ENST00000485946 TRIM26Q12899 539 aaPredicted RBP9.93□□□□□ -0.82
PCCA-209ENST00000485946 FBLN2P98095 1184 aa9.91□□□□□ -0.82
PCCA-209ENST00000485946 CECR2Q9BXF3 1484 aa9.89□□□□□ -0.83
PCCA-209ENST00000485946 SUPT5HO00267 1087 aaKnown RBP9.86□□□□□ -0.83
PCCA-209ENST00000485946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.84□□□□□ -0.83
PCCA-209ENST00000485946 HNRNPUL2Q1KMD3 747 aaKnown RBP9.84□□□□□ -0.83
PCCA-209ENST00000485946 BAZ1AQ9NRL2 1556 aaPredicted RBP9.84□□□□□ -0.83
PCCA-209ENST00000485946 SMARCA4P51532 1647 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms