RNA–Protein interactions for RNA: ENST00000527947.5

RAE1-209, Transcript of ribonucleic acid export 1, humanhuman

TSL 1 (best) BASIC

Gene RAE1, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-209ENST00000527947 NISCHQ9Y2I1 1504 aa29.52■■■□□ 2.32
RAE1-209ENST00000527947 CCDC180Q9P1Z9 1646 aa26.41■■□□□ 1.82
RAE1-209ENST00000527947 ABCC9O60706 1549 aa26.18■■□□□ 1.78
RAE1-209ENST00000527947 RB1CC1Q8TDY2 1594 aa25.04■■□□□ 1.6
RAE1-209ENST00000527947 NACADO15069 1562 aa24.93■■□□□ 1.58
RAE1-209ENST00000527947 DCAF8L2P0C7V8 631 aa24.74■■□□□ 1.55
RAE1-209ENST00000527947 MYO15BQ96JP2 1530 aa24.69■■□□□ 1.54
RAE1-209ENST00000527947 ZCCHC6Q5VYS8 1495 aaKnown RBP24.52■■□□□ 1.52
RAE1-209ENST00000527947 DCAF1Q9Y4B6 1507 aa24.43■■□□□ 1.5
RAE1-209ENST00000527947 UNC13AQ9UPW8 1703 aa24.4■■□□□ 1.5
RAE1-209ENST00000527947 PABPN1Q86U42 306 aaKnown RBP eCLIP24.39■■□□□ 1.49
RAE1-209ENST00000527947 DNAJC5BQ9UF47 199 aa24.38■■□□□ 1.49
RAE1-209ENST00000527947 BICRAQ9NZM4 1560 aa24.3■■□□□ 1.48
RAE1-209ENST00000527947 SHROOM4Q9ULL8 1493 aa24.06■■□□□ 1.44
RAE1-209ENST00000527947 SCRIBQ14160 1630 aa24.04■■□□□ 1.44
RAE1-209ENST00000527947 EIF4G1Q04637 1599 aaKnown RBP23.69■■□□□ 1.38
RAE1-209ENST00000527947 CC2D2AQ9P2K1 1620 aa23.67■■□□□ 1.38
RAE1-209ENST00000527947 CECR2Q9BXF3 1484 aa23.59■■□□□ 1.37
RAE1-209ENST00000527947 NCAPD3P42695 1498 aa23.02■■□□□ 1.28
RAE1-209ENST00000527947 SMARCA4P51532 1647 aa22.97■■□□□ 1.27
RAE1-209ENST00000527947 ATAD2BQ9ULI0 1458 aa22.96■■□□□ 1.27
RAE1-209ENST00000527947 SMARCA2P51531 1590 aa22.91■■□□□ 1.26
RAE1-209ENST00000527947 BAZ1AQ9NRL2 1556 aaPredicted RBP22.91■■□□□ 1.26
RAE1-209ENST00000527947 HMGXB3Q12766 1538 aa22.86■■□□□ 1.25
RAE1-209ENST00000527947 PEG3Q9GZU2 1588 aa22.78■■□□□ 1.24
RAE1-209ENST00000527947 BAZ1BQ9UIG0 1483 aaKnown RBP22.74■■□□□ 1.23
RAE1-209ENST00000527947 MROH2BQ7Z745 1585 aa22.73■■□□□ 1.23
RAE1-209ENST00000527947 ERCC6Q03468 1493 aa22.6■■□□□ 1.21
RAE1-209ENST00000527947 NESP48681 1621 aa22.55■■□□□ 1.2
RAE1-209ENST00000527947 CUX2O14529 1486 aa22.53■■□□□ 1.2
RAE1-209ENST00000527947 LAMC3Q9Y6N6 1575 aa22.46■■□□□ 1.19
RAE1-209ENST00000527947 WIZO95785 1651 aa22.44■■□□□ 1.18
RAE1-209ENST00000527947 RSF1Q96T23 1441 aaPredicted RBP22.34■■□□□ 1.17
RAE1-209ENST00000527947 PDS5BQ9NTI5 1447 aa22.31■■□□□ 1.16
RAE1-209ENST00000527947 CADPSQ9ULU8 1353 aa22.31■■□□□ 1.16
RAE1-209ENST00000527947 THOC2Q8NI27 1593 aaKnown RBP22.31■■□□□ 1.16
RAE1-209ENST00000527947 DNAJC5Q9H3Z4 198 aa22.27■■□□□ 1.16
RAE1-209ENST00000527947 KIF21AQ7Z4S6 1674 aa22.24■■□□□ 1.15
RAE1-209ENST00000527947 TOP2AP11388 1531 aaKnown RBP22.22■■□□□ 1.15
RAE1-209ENST00000527947 MRC2Q9UBG0 1479 aa22.12■■□□□ 1.13
RAE1-209ENST00000527947 CFTRP13569 1480 aa22.11■■□□□ 1.13
RAE1-209ENST00000527947 WDR62O43379 1518 aa22.07■■□□□ 1.12
RAE1-209ENST00000527947 CEP164Q9UPV0 1460 aa22.06■■□□□ 1.12
RAE1-209ENST00000527947 FANCD2Q9BXW9 1451 aa22.05■■□□□ 1.12
RAE1-209ENST00000527947 CCDC88BA6NC98 1476 aa21.95■■□□□ 1.1
RAE1-209ENST00000527947 URB2Q14146 1524 aaKnown RBP21.86■■□□□ 1.09
RAE1-209ENST00000527947 PRDM2Q13029 1718 aa21.85■■□□□ 1.09
RAE1-209ENST00000527947 TOPBP1Q92547 1522 aa21.66■■□□□ 1.06
RAE1-209ENST00000527947 SUPT5HO00267 1087 aaKnown RBP21.65■■□□□ 1.06
RAE1-209ENST00000527947 ABCC8Q09428 1581 aa21.64■■□□□ 1.06
RAE1-209ENST00000527947 IFT140Q96RY7 1462 aa21.62■■□□□ 1.05
RAE1-209ENST00000527947 DNMBPQ6XZF7 1577 aa21.6■■□□□ 1.05
RAE1-209ENST00000527947 ZNF608Q9ULD9 1512 aaPredicted RBP21.54■■□□□ 1.04
RAE1-209ENST00000527947 OSCARQ8IYS5 282 aa21.5■■□□□ 1.03
RAE1-209ENST00000527947 POLA1P09884 1462 aaPredicted RBP21.45■■□□□ 1.02
RAE1-209ENST00000527947 EIF4G3O43432 1585 aaKnown RBP21.45■■□□□ 1.02
RAE1-209ENST00000527947 TARBP1Q13395 1621 aaKnown RBP21.44■■□□□ 1.02
RAE1-209ENST00000527947 AQRO60306 1485 aaKnown RBP eCLIP21.36■■□□□ 1.018e-8■■■■■ 32.1
RAE1-209ENST00000527947 RAD54L2Q9Y4B4 1467 aa21.35■■□□□ 1.01
RAE1-209ENST00000527947 CUX1P39880 1505 aa21.35■■□□□ 1.01
RAE1-209ENST00000527947 SOGA1O94964 1423 aa21.34■■□□□ 1.01
RAE1-209ENST00000527947 FGD5Q6ZNL6 1462 aa21.34■■□□□ 1.01
RAE1-209ENST00000527947 TRIM41Q8WV44 630 aa21.33■■□□□ 1
RAE1-209ENST00000527947 WDR97A6NE52 1622 aa21.28■■□□□ 1
RAE1-209ENST00000527947 TDRD9Q8NDG6 1382 aaKnown RBP21.27■□□□□ 0.99
RAE1-209ENST00000527947 CHD1O14646 1710 aa21.21■□□□□ 0.99
RAE1-209ENST00000527947 RIMBP3CA6NJZ7 1639 aa21.2■□□□□ 0.98
RAE1-209ENST00000527947 RIMBP3BA6NNM3 1639 aa21.2■□□□□ 0.98
RAE1-209ENST00000527947 RIMBP3Q9UFD9 1639 aa21.2■□□□□ 0.98
RAE1-209ENST00000527947 SNAPC4Q5SXM2 1469 aa21.18■□□□□ 0.98
RAE1-209ENST00000527947 ARHGEF11O15085 1522 aa21.17■□□□□ 0.98
RAE1-209ENST00000527947 GRIN2BQ13224 1484 aa21.15■□□□□ 0.98
RAE1-209ENST00000527947 FBLN2P98095 1184 aa21.15■□□□□ 0.98
RAE1-209ENST00000527947 MAGI1Q96QZ7 1491 aaPredicted RBP21.15■□□□□ 0.98
RAE1-209ENST00000527947 ABCA10Q8WWZ4 1543 aa21.12■□□□□ 0.97
RAE1-209ENST00000527947 GAPVD1Q14C86 1478 aa21.1■□□□□ 0.97
RAE1-209ENST00000527947 WRNQ14191 1432 aaPredicted RBP eCLIP21.07■□□□□ 0.96
RAE1-209ENST00000527947 ABCA5Q8WWZ7 1642 aa21.07■□□□□ 0.96
RAE1-209ENST00000527947 SYNJ2O15056 1496 aa21.07■□□□□ 0.96
RAE1-209ENST00000527947 TOP2BQ02880 1626 aa21.06■□□□□ 0.96
RAE1-209ENST00000527947 BIVM-ERCC5R4GMW8 1640 aa21.06■□□□□ 0.96
RAE1-209ENST00000527947 CHMP7Q8WUX9 453 aaPredicted RBP21.05■□□□□ 0.96
RAE1-209ENST00000527947 PBRM1Q86U86 1689 aa21.05■□□□□ 0.96
RAE1-209ENST00000527947 SYNJ1O43426 1573 aa21.04■□□□□ 0.96
RAE1-209ENST00000527947 CLASP1Q7Z460 1538 aa21.03■□□□□ 0.96
RAE1-209ENST00000527947 ARAP1Q96P48 1450 aa20.97■□□□□ 0.95
RAE1-209ENST00000527947 CYB5RLQ6IPT4 315 aa20.95■□□□□ 0.94
RAE1-209ENST00000527947 ADAMTS12P58397 1594 aa20.9■□□□□ 0.94
RAE1-209ENST00000527947 GRIN2AQ12879 1464 aa20.89■□□□□ 0.93
RAE1-209ENST00000527947 ERICH3Q5RHP9 1530 aa20.87■□□□□ 0.93
RAE1-209ENST00000527947 FHAD1B1AJZ9 1412 aa20.85■□□□□ 0.93
RAE1-209ENST00000527947 NUP160Q12769 1436 aa20.82■□□□□ 0.92
RAE1-209ENST00000527947 CEP170Q5SW79 1584 aa20.79■□□□□ 0.92
RAE1-209ENST00000527947 SHROOM2Q13796 1616 aa20.7■□□□□ 0.9
RAE1-209ENST00000527947 ERCC6L2Q5T890 1561 aa20.68■□□□□ 0.9
RAE1-209ENST00000527947 KIF27Q86VH2 1401 aa20.66■□□□□ 0.9
RAE1-209ENST00000527947 TRHP20396 242 aaPredicted RBP20.65■□□□□ 0.9
RAE1-209ENST00000527947 IGF1RP08069 1367 aa20.62■□□□□ 0.89
RAE1-209ENST00000527947 RUSC2Q8N2Y8 1516 aa20.6■□□□□ 0.89
RAE1-209ENST00000527947 CUL7Q14999 1698 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms