RNA–Protein interactions for RNA: ENST00000319167.12

TRO-202, Transcript of trophinin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRO, Length 2,326 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-202ENST00000319167 NISCHQ9Y2I1 1504 aa26.95■■□□□ 1.9
TRO-202ENST00000319167 SHROOM4Q9ULL8 1493 aa23.19■■□□□ 1.3
TRO-202ENST00000319167 CCDC180Q9P1Z9 1646 aa22.78■■□□□ 1.24
TRO-202ENST00000319167 SUPT5HO00267 1087 aaKnown RBP22.76■■□□□ 1.23
TRO-202ENST00000319167 ZCCHC6Q5VYS8 1495 aaKnown RBP22.76■■□□□ 1.23
TRO-202ENST00000319167 DCAF8L2P0C7V8 631 aa22.64■■□□□ 1.21
TRO-202ENST00000319167 CHIC1Q5VXU3 224 aa22.03■■□□□ 1.12
TRO-202ENST00000319167 DCAF1Q9Y4B6 1507 aa22.01■■□□□ 1.11
TRO-202ENST00000319167 MYO15BQ96JP2 1530 aa21.91■■□□□ 1.1
TRO-202ENST00000319167 SCRIBQ14160 1630 aa21.52■■□□□ 1.04
TRO-202ENST00000319167 LOC105371045A0A1W2PR82 267 aa21.47■■□□□ 1.03
TRO-202ENST00000319167 ABCC9O60706 1549 aa21.46■■□□□ 1.03
TRO-202ENST00000319167 PCGF6Q9BYE7 350 aa21.44■■□□□ 1.02
TRO-202ENST00000319167 RSF1Q96T23 1441 aaPredicted RBP21.37■■□□□ 1.01
TRO-202ENST00000319167 HRCP23327 699 aa21.35■■□□□ 1.01
TRO-202ENST00000319167 TRIM41Q8WV44 630 aa21.16■□□□□ 0.98
TRO-202ENST00000319167 NACADO15069 1562 aa21.14■□□□□ 0.97
TRO-202ENST00000319167 RB1CC1Q8TDY2 1594 aa21.12■□□□□ 0.97
TRO-202ENST00000319167 CECR2Q9BXF3 1484 aa21.09■□□□□ 0.97
TRO-202ENST00000319167 FAM9AQ8IZU1 332 aaPredicted RBP21.07■□□□□ 0.96
TRO-202ENST00000319167 PPARGC1BQ86YN6 1023 aaKnown RBP21.01■□□□□ 0.95
TRO-202ENST00000319167 MROH2BQ7Z745 1585 aa20.99■□□□□ 0.95
TRO-202ENST00000319167 EHMT2Q96KQ7 1210 aa20.96■□□□□ 0.95
TRO-202ENST00000319167 TRIM26Q12899 539 aaPredicted RBP20.95■□□□□ 0.94
TRO-202ENST00000319167 WIZO95785 1651 aa20.86■□□□□ 0.93
TRO-202ENST00000319167 BAZ1AQ9NRL2 1556 aaPredicted RBP20.68■□□□□ 0.9
TRO-202ENST00000319167 PABPN1Q86U42 306 aaKnown RBP eCLIP20.5■□□□□ 0.874e-7■■□□□ 14.5
TRO-202ENST00000319167 SMARCA4P51532 1647 aa20.49■□□□□ 0.87
TRO-202ENST00000319167 TOP2AP11388 1531 aaKnown RBP20.49■□□□□ 0.87
TRO-202ENST00000319167 CCDC88BA6NC98 1476 aa20.48■□□□□ 0.87
TRO-202ENST00000319167 EIF4G1Q04637 1599 aaKnown RBP20.47■□□□□ 0.87
TRO-202ENST00000319167 ZEB1P37275 1124 aaPredicted RBP20.45■□□□□ 0.86
TRO-202ENST00000319167 ABCC8Q09428 1581 aa20.44■□□□□ 0.86
TRO-202ENST00000319167 UNC13AQ9UPW8 1703 aa20.44■□□□□ 0.86
TRO-202ENST00000319167 SMARCA2P51531 1590 aa20.39■□□□□ 0.85
TRO-202ENST00000319167 SOGA1O94964 1423 aa20.28■□□□□ 0.84
TRO-202ENST00000319167 TTBK1Q5TCY1 1321 aaPredicted RBP20.27■□□□□ 0.84
TRO-202ENST00000319167 BICRAQ9NZM4 1560 aa20.24■□□□□ 0.83
TRO-202ENST00000319167 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.2■□□□□ 0.82
TRO-202ENST00000319167 CSRNP3Q8WYN3 585 aa20.19■□□□□ 0.82
TRO-202ENST00000319167 RUSC2Q8N2Y8 1516 aa20.18■□□□□ 0.82
TRO-202ENST00000319167 UBTFP17480 764 aaKnown RBP20.18■□□□□ 0.82
TRO-202ENST00000319167 CEP162Q5TB80 1403 aa20.16■□□□□ 0.82
TRO-202ENST00000319167 CCER1Q8TC90 406 aaPredicted RBP20.13■□□□□ 0.81
TRO-202ENST00000319167 TNIKQ9UKE5 1360 aa20.1■□□□□ 0.81
TRO-202ENST00000319167 WRNQ14191 1432 aaPredicted RBP eCLIP20.09■□□□□ 0.81
TRO-202ENST00000319167 EEA1Q15075 1411 aa20.07■□□□□ 0.8
TRO-202ENST00000319167 PEG3Q9GZU2 1588 aa20.04■□□□□ 0.8
TRO-202ENST00000319167 ATAD2BQ9ULI0 1458 aa20.02■□□□□ 0.8
TRO-202ENST00000319167 GOLGA3Q08378 1498 aa19.98■□□□□ 0.79
TRO-202ENST00000319167 BAZ1BQ9UIG0 1483 aaKnown RBP19.98■□□□□ 0.79
TRO-202ENST00000319167 SYNJ1O43426 1573 aa19.95■□□□□ 0.78
TRO-202ENST00000319167 RANGAP1P46060 587 aaPredicted RBP19.88■□□□□ 0.77
TRO-202ENST00000319167 CEP164Q9UPV0 1460 aa19.86■□□□□ 0.77
TRO-202ENST00000319167 CLIP1P30622 1438 aa19.79■□□□□ 0.76
TRO-202ENST00000319167 KIF21BO75037 1637 aa19.77■□□□□ 0.75
TRO-202ENST00000319167 RAPGEF2Q9Y4G8 1499 aa19.76■□□□□ 0.75
TRO-202ENST00000319167 HNRNPUL2Q1KMD3 747 aaKnown RBP19.75■□□□□ 0.75
TRO-202ENST00000319167 APLP2Q06481 763 aa19.72■□□□□ 0.75
TRO-202ENST00000319167 DIEXFQ68CQ4 756 aaKnown RBP19.7■□□□□ 0.74
TRO-202ENST00000319167 SCAF1Q9H7N4 1312 aaKnown RBP19.7■□□□□ 0.74
TRO-202ENST00000319167 VPS8Q8N3P4 1428 aa19.67■□□□□ 0.74
TRO-202ENST00000319167 TOP2BQ02880 1626 aa19.66■□□□□ 0.74
TRO-202ENST00000319167 NCAPD3P42695 1498 aa19.6■□□□□ 0.73
TRO-202ENST00000319167 BIVM-ERCC5R4GMW8 1640 aa19.55■□□□□ 0.72
TRO-202ENST00000319167 HMGXB3Q12766 1538 aa19.54■□□□□ 0.72
TRO-202ENST00000319167 ZNF316A6NFI3 1004 aaPredicted RBP19.53■□□□□ 0.72
TRO-202ENST00000319167 CUX1P39880 1505 aa19.52■□□□□ 0.72
TRO-202ENST00000319167 NEUROD1Q13562 356 aa19.51■□□□□ 0.71
TRO-202ENST00000319167 PRXQ9BXM0 1461 aa19.51■□□□□ 0.71
TRO-202ENST00000319167 ACIN1Q9UKV3 1341 aaKnown RBP19.5■□□□□ 0.71
TRO-202ENST00000319167 KIF27Q86VH2 1401 aa19.46■□□□□ 0.71
TRO-202ENST00000319167 CFTRP13569 1480 aa19.46■□□□□ 0.71
TRO-202ENST00000319167 ERICH3Q5RHP9 1530 aa19.45■□□□□ 0.7
TRO-202ENST00000319167 KANK4Q5T7N3 995 aaPredicted RBP19.45■□□□□ 0.7
TRO-202ENST00000319167 ARAP1Q96P48 1450 aa19.44■□□□□ 0.7
TRO-202ENST00000319167 CENPBP07199 599 aaPredicted RBP19.4■□□□□ 0.7
TRO-202ENST00000319167 YTHDC1Q96MU7 727 aaKnown RBP19.33■□□□□ 0.68
TRO-202ENST00000319167 GTF3C3Q9Y5Q9 886 aa19.33■□□□□ 0.68
TRO-202ENST00000319167 CUX2O14529 1486 aa19.3■□□□□ 0.68
TRO-202ENST00000319167 MIER1Q8N108 512 aa19.29■□□□□ 0.68
TRO-202ENST00000319167 CADPSQ9ULU8 1353 aa19.28■□□□□ 0.68
TRO-202ENST00000319167 ARHGAP35Q9NRY4 1499 aa19.28■□□□□ 0.68
TRO-202ENST00000319167 ITGAEP38570 1179 aa19.28■□□□□ 0.68
TRO-202ENST00000319167 IGF1RP08069 1367 aa19.27■□□□□ 0.68
TRO-202ENST00000319167 DHX57Q6P158 1386 aaKnown RBP19.24■□□□□ 0.67
TRO-202ENST00000319167 CARMIL1Q5VZK9 1371 aa19.2■□□□□ 0.66
TRO-202ENST00000319167 FGD5Q6ZNL6 1462 aa19.2■□□□□ 0.66
TRO-202ENST00000319167 RRBP1Q9P2E9 1410 aaKnown RBP19.19■□□□□ 0.66
TRO-202ENST00000319167 CCNB3Q8WWL7 1395 aa19.18■□□□□ 0.66
TRO-202ENST00000319167 P3H3Q8IVL6 736 aa19.16■□□□□ 0.66
TRO-202ENST00000319167 CLSPNQ9HAW4 1339 aa19.16■□□□□ 0.66
TRO-202ENST00000319167 PELP1Q8IZL8 1130 aaKnown RBP19.16■□□□□ 0.66
TRO-202ENST00000319167 PRDM2Q13029 1718 aa19.14■□□□□ 0.65
TRO-202ENST00000319167 ATP1B4Q9UN42 357 aaPredicted RBP19.13■□□□□ 0.65
TRO-202ENST00000319167 CC2D2AQ9P2K1 1620 aa19.12■□□□□ 0.65
TRO-202ENST00000319167 FANCD2Q9BXW9 1451 aa19.1■□□□□ 0.65
TRO-202ENST00000319167 RAD54L2Q9Y4B4 1467 aa19.06■□□□□ 0.64
TRO-202ENST00000319167 FAM50AQ14320 339 aaKnown RBP19.03■□□□□ 0.64
TRO-202ENST00000319167 TIAM1Q13009 1591 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms