RNA–Protein interactions for RNA: ENST00000429339.5

RAE1-205, Transcript of ribonucleic acid export 1, humanhuman

TSL 5

Gene RAE1, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-205ENST00000429339 NISCHQ9Y2I1 1504 aa26.83■■□□□ 1.89
RAE1-205ENST00000429339 ABCC9O60706 1549 aa24.96■■□□□ 1.59
RAE1-205ENST00000429339 CCDC180Q9P1Z9 1646 aa24.28■■□□□ 1.48
RAE1-205ENST00000429339 DNAJC5BQ9UF47 199 aa24.17■■□□□ 1.46
RAE1-205ENST00000429339 RB1CC1Q8TDY2 1594 aa23.34■■□□□ 1.33
RAE1-205ENST00000429339 PABPN1Q86U42 306 aaKnown RBP eCLIP23.14■■□□□ 1.29
RAE1-205ENST00000429339 UNC13AQ9UPW8 1703 aa23.12■■□□□ 1.29
RAE1-205ENST00000429339 NACADO15069 1562 aa23.05■■□□□ 1.28
RAE1-205ENST00000429339 BICRAQ9NZM4 1560 aa22.99■■□□□ 1.27
RAE1-205ENST00000429339 DCAF8L2P0C7V8 631 aa22.7■■□□□ 1.22
RAE1-205ENST00000429339 CC2D2AQ9P2K1 1620 aa22.53■■□□□ 1.2
RAE1-205ENST00000429339 MYO15BQ96JP2 1530 aa22.52■■□□□ 1.2
RAE1-205ENST00000429339 CECR2Q9BXF3 1484 aa22.48■■□□□ 1.19
RAE1-205ENST00000429339 DNAJC5Q9H3Z4 198 aa22.39■■□□□ 1.17
RAE1-205ENST00000429339 EIF4G1Q04637 1599 aaKnown RBP22.32■■□□□ 1.16
RAE1-205ENST00000429339 SHROOM4Q9ULL8 1493 aa22.24■■□□□ 1.15
RAE1-205ENST00000429339 SCRIBQ14160 1630 aa22.18■■□□□ 1.14
RAE1-205ENST00000429339 ZCCHC6Q5VYS8 1495 aaKnown RBP22.13■■□□□ 1.13
RAE1-205ENST00000429339 DCAF1Q9Y4B6 1507 aa22.05■■□□□ 1.12
RAE1-205ENST00000429339 CUX2O14529 1486 aa21.61■■□□□ 1.05
RAE1-205ENST00000429339 ERCC6Q03468 1493 aa21.39■■□□□ 1.02
RAE1-205ENST00000429339 NESP48681 1621 aa21.38■■□□□ 1.01
RAE1-205ENST00000429339 NCAPD3P42695 1498 aa21.35■■□□□ 1.01
RAE1-205ENST00000429339 THOC2Q8NI27 1593 aaKnown RBP21.25■□□□□ 0.99
RAE1-205ENST00000429339 ATAD2BQ9ULI0 1458 aa21.24■□□□□ 0.99
RAE1-205ENST00000429339 HMGXB3Q12766 1538 aa21.12■□□□□ 0.97
RAE1-205ENST00000429339 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
RAE1-205ENST00000429339 SMARCA4P51532 1647 aa21.08■□□□□ 0.97
RAE1-205ENST00000429339 KIF21AQ7Z4S6 1674 aa21.05■□□□□ 0.96
RAE1-205ENST00000429339 SMARCA2P51531 1590 aa21.02■□□□□ 0.95
RAE1-205ENST00000429339 LAMC3Q9Y6N6 1575 aa20.9■□□□□ 0.94
RAE1-205ENST00000429339 BAZ1BQ9UIG0 1483 aaKnown RBP20.89■□□□□ 0.94
RAE1-205ENST00000429339 PEG3Q9GZU2 1588 aa20.87■□□□□ 0.93
RAE1-205ENST00000429339 MROH2BQ7Z745 1585 aa20.76■□□□□ 0.91
RAE1-205ENST00000429339 BAZ1AQ9NRL2 1556 aaPredicted RBP20.76■□□□□ 0.91
RAE1-205ENST00000429339 WDR62O43379 1518 aa20.73■□□□□ 0.91
RAE1-205ENST00000429339 PDS5BQ9NTI5 1447 aa20.7■□□□□ 0.9
RAE1-205ENST00000429339 MRC2Q9UBG0 1479 aa20.69■□□□□ 0.9
RAE1-205ENST00000429339 CADPSQ9ULU8 1353 aa20.62■□□□□ 0.89
RAE1-205ENST00000429339 RIMBP3CA6NJZ7 1639 aa20.49■□□□□ 0.87
RAE1-205ENST00000429339 RIMBP3BA6NNM3 1639 aa20.49■□□□□ 0.87
RAE1-205ENST00000429339 RIMBP3Q9UFD9 1639 aa20.49■□□□□ 0.87
RAE1-205ENST00000429339 WIZO95785 1651 aa20.49■□□□□ 0.87
RAE1-205ENST00000429339 OSCARQ8IYS5 282 aa20.45■□□□□ 0.86
RAE1-205ENST00000429339 CEP164Q9UPV0 1460 aa20.44■□□□□ 0.86
RAE1-205ENST00000429339 FANCD2Q9BXW9 1451 aa20.43■□□□□ 0.86
RAE1-205ENST00000429339 URB2Q14146 1524 aaKnown RBP20.43■□□□□ 0.86
RAE1-205ENST00000429339 ARHGEF11O15085 1522 aa20.32■□□□□ 0.84
RAE1-205ENST00000429339 CFTRP13569 1480 aa20.32■□□□□ 0.84
RAE1-205ENST00000429339 ZNF608Q9ULD9 1512 aaPredicted RBP20.29■□□□□ 0.84
RAE1-205ENST00000429339 ARAP1Q96P48 1450 aa20.15■□□□□ 0.82
RAE1-205ENST00000429339 CYB5RLQ6IPT4 315 aa20.1■□□□□ 0.81
RAE1-205ENST00000429339 CHD1O14646 1710 aa20.08■□□□□ 0.81
RAE1-205ENST00000429339 EIF4G3O43432 1585 aaKnown RBP20.08■□□□□ 0.8
RAE1-205ENST00000429339 PRDM2Q13029 1718 aa20.07■□□□□ 0.8
RAE1-205ENST00000429339 TOP2AP11388 1531 aaKnown RBP20.06■□□□□ 0.8
RAE1-205ENST00000429339 RSF1Q96T23 1441 aaPredicted RBP20.05■□□□□ 0.8
RAE1-205ENST00000429339 IFT140Q96RY7 1462 aa20.05■□□□□ 0.8
RAE1-205ENST00000429339 TOPBP1Q92547 1522 aa20.02■□□□□ 0.79
RAE1-205ENST00000429339 TARBP1Q13395 1621 aaKnown RBP19.97■□□□□ 0.79
RAE1-205ENST00000429339 AQRO60306 1485 aaKnown RBP eCLIP19.96■□□□□ 0.798e-8■■■■■ 35.8
RAE1-205ENST00000429339 TRHP20396 242 aaPredicted RBP19.95■□□□□ 0.78
RAE1-205ENST00000429339 CCDC88BA6NC98 1476 aa19.89■□□□□ 0.77
RAE1-205ENST00000429339 DNMBPQ6XZF7 1577 aa19.84■□□□□ 0.77
RAE1-205ENST00000429339 CLASP1Q7Z460 1538 aa19.83■□□□□ 0.77
RAE1-205ENST00000429339 POLA1P09884 1462 aaPredicted RBP19.79■□□□□ 0.76
RAE1-205ENST00000429339 RAD54L2Q9Y4B4 1467 aa19.79■□□□□ 0.76
RAE1-205ENST00000429339 FBLN2P98095 1184 aa19.73■□□□□ 0.75
RAE1-205ENST00000429339 TDRD9Q8NDG6 1382 aaKnown RBP19.7■□□□□ 0.74
RAE1-205ENST00000429339 SNAPC4Q5SXM2 1469 aa19.69■□□□□ 0.74
RAE1-205ENST00000429339 AEBP2Q6ZN18 517 aaPredicted RBP19.69■□□□□ 0.74
RAE1-205ENST00000429339 ABCC8Q09428 1581 aa19.69■□□□□ 0.74
RAE1-205ENST00000429339 ERCC6L2Q5T890 1561 aa19.61■□□□□ 0.73
RAE1-205ENST00000429339 SOGA1O94964 1423 aa19.58■□□□□ 0.72
RAE1-205ENST00000429339 FGD5Q6ZNL6 1462 aa19.56■□□□□ 0.72
RAE1-205ENST00000429339 SYNJ1O43426 1573 aa19.56■□□□□ 0.72
RAE1-205ENST00000429339 GAPVD1Q14C86 1478 aa19.55■□□□□ 0.72
RAE1-205ENST00000429339 WDR97A6NE52 1622 aa19.55■□□□□ 0.72
RAE1-205ENST00000429339 CUX1P39880 1505 aa19.53■□□□□ 0.72
RAE1-205ENST00000429339 MAGI1Q96QZ7 1491 aaPredicted RBP19.52■□□□□ 0.72
RAE1-205ENST00000429339 SYNJ2O15056 1496 aa19.49■□□□□ 0.71
RAE1-205ENST00000429339 KIF13AQ9H1H9 1805 aa19.46■□□□□ 0.71
RAE1-205ENST00000429339 PBRM1Q86U86 1689 aa19.46■□□□□ 0.71
RAE1-205ENST00000429339 CHMP7Q8WUX9 453 aaPredicted RBP19.46■□□□□ 0.71
RAE1-205ENST00000429339 GRIN2BQ13224 1484 aa19.46■□□□□ 0.71
RAE1-205ENST00000429339 ABCA5Q8WWZ7 1642 aa19.38■□□□□ 0.69
RAE1-205ENST00000429339 CEP170Q5SW79 1584 aa19.36■□□□□ 0.69
RAE1-205ENST00000429339 SHROOM2Q13796 1616 aa19.31■□□□□ 0.68
RAE1-205ENST00000429339 NUP160Q12769 1436 aa19.28■□□□□ 0.68
RAE1-205ENST00000429339 GRIN2AQ12879 1464 aa19.28■□□□□ 0.68
RAE1-205ENST00000429339 ABCA10Q8WWZ4 1543 aa19.26■□□□□ 0.67
RAE1-205ENST00000429339 ADAMTS12P58397 1594 aa19.25■□□□□ 0.67
RAE1-205ENST00000429339 KDM4FA0A1W2PPD8 638 aa19.24■□□□□ 0.67
RAE1-205ENST00000429339 ILDR1Q86SU0 546 aaPredicted RBP19.22■□□□□ 0.67
RAE1-205ENST00000429339 DIP2BQ9P265 1576 aa19.13■□□□□ 0.65
RAE1-205ENST00000429339 ABCC10Q5T3U5 1492 aa19.11■□□□□ 0.65
RAE1-205ENST00000429339 ADCY10Q96PN6 1610 aa19.07■□□□□ 0.64
RAE1-205ENST00000429339 PRG4Q92954 1404 aaPredicted RBP19.07■□□□□ 0.64
RAE1-205ENST00000429339 MAPKBP1O60336 1514 aa19.04■□□□□ 0.64
RAE1-205ENST00000429339 FHAD1B1AJZ9 1412 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms