RNA–Protein interactions for RNA: ENST00000528434.5

CELF1-211, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 5

Gene CELF1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-211ENST00000528434 CHIC1Q5VXU3 224 aa23.1■■□□□ 1.29
CELF1-211ENST00000528434 AEBP2Q6ZN18 517 aaPredicted RBP22.88■■□□□ 1.25
CELF1-211ENST00000528434 PHF23Q9BUL5 403 aaPredicted RBP20.43■□□□□ 0.86
CELF1-211ENST00000528434 SENP3Q9H4L4 574 aaPredicted RBP19.24■□□□□ 0.67
CELF1-211ENST00000528434 PLPPR3Q6T4P5 718 aa19.1■□□□□ 0.65
CELF1-211ENST00000528434 ADRA2BP18089 450 aa17.89■□□□□ 0.45
CELF1-211ENST00000528434 FOXD1Q16676 465 aa17.8■□□□□ 0.44
CELF1-211ENST00000528434 PPP6R1Q9UPN7 881 aa17.77■□□□□ 0.44
CELF1-211ENST00000528434 KCNA4P22459 653 aa17.45■□□□□ 0.38
CELF1-211ENST00000528434 EHMT2Q96KQ7 1210 aa17.15■□□□□ 0.34
CELF1-211ENST00000528434 PPP4R3CPQ6ZMV5 832 aa16.94■□□□□ 0.3
CELF1-211ENST00000528434 PIAS4Q8N2W9 510 aaPredicted RBP16.93■□□□□ 0.3
CELF1-211ENST00000528434 SLC4A1APQ9BWU0 796 aaKnown RBP16.73■□□□□ 0.27
CELF1-211ENST00000528434 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
CELF1-211ENST00000528434 CSRNP3Q8WYN3 585 aa16.65■□□□□ 0.26
CELF1-211ENST00000528434 NPM3O75607 178 aaKnown RBP16.48■□□□□ 0.23
CELF1-211ENST00000528434 CNKSR2Q8WXI2 1034 aa16.29■□□□□ 0.2
CELF1-211ENST00000528434 SCAF1Q9H7N4 1312 aaKnown RBP16.23■□□□□ 0.19
CELF1-211ENST00000528434 ZBTB22O15209 634 aa16.09■□□□□ 0.17
CELF1-211ENST00000528434 MSH5O43196 834 aa16.06■□□□□ 0.16
CELF1-211ENST00000528434 DNAJC5BQ9UF47 199 aa15.94■□□□□ 0.14
CELF1-211ENST00000528434 MAPK8IP2Q13387 824 aaPredicted RBP15.91■□□□□ 0.14
CELF1-211ENST00000528434 FOXD4L1Q9NU39 408 aa15.81■□□□□ 0.12
CELF1-211ENST00000528434 RNF216Q9NWF9 866 aaPredicted RBP15.78■□□□□ 0.12
CELF1-211ENST00000528434 HOXD11P31277 338 aaPredicted RBP15.52■□□□□ 0.08
CELF1-211ENST00000528434 DMRT2Q9Y5R5 561 aa15.51■□□□□ 0.07
CELF1-211ENST00000528434 SLC4A2P04920 1241 aa15.4■□□□□ 0.06
CELF1-211ENST00000528434 ATXN8OSP0DMR3 200 aa15.21■□□□□ 0.03
CELF1-211ENST00000528434 MYCNP04198 464 aaPredicted RBP15.18■□□□□ 0.02
CELF1-211ENST00000528434 RTN4Q9NQC3 1192 aaKnown RBP15.04■□□□□ -0
CELF1-211ENST00000528434 AMER1Q5JTC6 1135 aaPredicted RBP15.02■□□□□ -0
CELF1-211ENST00000528434 FKBP8Q14318 412 aa14.96□□□□□ -0.01
CELF1-211ENST00000528434 SLC24A1O60721 1099 aa14.85□□□□□ -0.03
CELF1-211ENST00000528434 ATF5Q9Y2D1 282 aaPredicted RBP14.77□□□□□ -0.05
CELF1-211ENST00000528434 DCAF8L1A6NGE4 600 aa14.73□□□□□ -0.05
CELF1-211ENST00000528434 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.73□□□□□ -0.055e-7■■■□□ 17.8
CELF1-211ENST00000528434 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.67□□□□□ -0.06
CELF1-211ENST00000528434 HNRNPUL2Q1KMD3 747 aaKnown RBP14.67□□□□□ -0.06
CELF1-211ENST00000528434 SAMD1Q6SPF0 538 aaPredicted RBP14.67□□□□□ -0.06
CELF1-211ENST00000528434 U3KPZ7 1027 aaPredicted RBP14.62□□□□□ -0.07
CELF1-211ENST00000528434 ZNF219Q9P2Y4 722 aaPredicted RBP14.41□□□□□ -0.1
CELF1-211ENST00000528434 APLP2Q06481 763 aa14.31□□□□□ -0.12
CELF1-211ENST00000528434 FBXO3Q9UK99 471 aa14.21□□□□□ -0.13
CELF1-211ENST00000528434 SPDYE4A6NLX3 237 aa14.2□□□□□ -0.14
CELF1-211ENST00000528434 MKRN4PQ13434 485 aaPredicted RBP14.16□□□□□ -0.14
CELF1-211ENST00000528434 PROM2Q8N271 834 aa14.12□□□□□ -0.15
CELF1-211ENST00000528434 FBLN2P98095 1184 aa14.03□□□□□ -0.16
CELF1-211ENST00000528434 VASPP50552 380 aaPredicted RBP13.99□□□□□ -0.17
CELF1-211ENST00000528434 TRHP20396 242 aaPredicted RBP13.98□□□□□ -0.17
CELF1-211ENST00000528434 POLA2Q14181 598 aa13.97□□□□□ -0.17
CELF1-211ENST00000528434 SPINK5Q9NQ38 1064 aaPredicted RBP13.97□□□□□ -0.17
CELF1-211ENST00000528434 IFNLR1Q8IU57 520 aaPredicted RBP13.9□□□□□ -0.18
CELF1-211ENST00000528434 RNF39Q9H2S5 420 aa13.87□□□□□ -0.19
CELF1-211ENST00000528434 PLCB2Q00722 1185 aa13.86□□□□□ -0.19
CELF1-211ENST00000528434 CAPN15O75808 1086 aa13.84□□□□□ -0.19
CELF1-211ENST00000528434 PKD2Q13563 968 aa13.75□□□□□ -0.21
CELF1-211ENST00000528434 ZBTB12Q9Y330 459 aaPredicted RBP13.75□□□□□ -0.21
CELF1-211ENST00000528434 C1QBPQ07021 282 aaKnown RBP13.74□□□□□ -0.21
CELF1-211ENST00000528434 DCAF8L2P0C7V8 631 aa13.68□□□□□ -0.22
CELF1-211ENST00000528434 ABCB7O75027 752 aa13.66□□□□□ -0.22
CELF1-211ENST00000528434 HAP1P54257 671 aaPredicted RBP13.63□□□□□ -0.23
CELF1-211ENST00000528434 SPOCK2Q92563 424 aa13.58□□□□□ -0.24
CELF1-211ENST00000528434 KLHL34Q8N239 644 aa13.55□□□□□ -0.24
CELF1-211ENST00000528434 STAG3Q9UJ98 1225 aa13.55□□□□□ -0.24
CELF1-211ENST00000528434 ZNF692Q9BU19 519 aaPredicted RBP13.54□□□□□ -0.24
CELF1-211ENST00000528434 VSIG10Q8N0Z9 540 aa13.5□□□□□ -0.25
CELF1-211ENST00000528434 SPDYE2BA6NHP3 402 aa13.47□□□□□ -0.25
CELF1-211ENST00000528434 ECM2O94769 699 aaPredicted RBP13.47□□□□□ -0.25
CELF1-211ENST00000528434 SPDYE6P0CI01 402 aa13.47□□□□□ -0.25
CELF1-211ENST00000528434 DSG3P32926 999 aa13.47□□□□□ -0.25
CELF1-211ENST00000528434 SPDYE2Q495Y8 402 aa13.47□□□□□ -0.25
CELF1-211ENST00000528434 SSUH2Q9Y2M2 353 aa13.47□□□□□ -0.25
CELF1-211ENST00000528434 BBXQ8WY36 941 aaPredicted RBP13.46□□□□□ -0.25
CELF1-211ENST00000528434 NPM1P06748 294 aaKnown RBP eCLIP13.42□□□□□ -0.26
CELF1-211ENST00000528434 OSCARQ8IYS5 282 aa13.42□□□□□ -0.26
CELF1-211ENST00000528434 PLCD3Q8N3E9 789 aa13.42□□□□□ -0.26
CELF1-211ENST00000528434 BCANQ96GW7 911 aa13.42□□□□□ -0.26
CELF1-211ENST00000528434 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.42□□□□□ -0.26
CELF1-211ENST00000528434 PABPN1Q86U42 306 aaKnown RBP eCLIP13.39□□□□□ -0.27
CELF1-211ENST00000528434 MIER1Q8N108 512 aa13.37□□□□□ -0.27
CELF1-211ENST00000528434 RGL2O15211 777 aa13.34□□□□□ -0.27
CELF1-211ENST00000528434 PAXIP1Q6ZW49 1069 aaPredicted RBP13.33□□□□□ -0.28
CELF1-211ENST00000528434 KDM2AQ9Y2K7 1162 aa13.31□□□□□ -0.28
CELF1-211ENST00000528434 CFAP44Q96MT7 982 aa13.28□□□□□ -0.28
CELF1-211ENST00000528434 POTEDQ86YR6 584 aa13.26□□□□□ -0.29
CELF1-211ENST00000528434 TAOK2Q9UL54 1235 aa13.24□□□□□ -0.29
CELF1-211ENST00000528434 PRKCSHP14314 528 aaPredicted RBP13.23□□□□□ -0.29
CELF1-211ENST00000528434 SPRYD3Q8NCJ5 442 aa13.22□□□□□ -0.29
CELF1-211ENST00000528434 ZBTB47Q9UFB7 747 aaPredicted RBP13.22□□□□□ -0.29
CELF1-211ENST00000528434 CIZ1Q9ULV3 898 aaPredicted RBP13.21□□□□□ -0.29
CELF1-211ENST00000528434 PLEKHG5O94827 1062 aa13.2□□□□□ -0.3
CELF1-211ENST00000528434 CHGAP10645 457 aaKnown RBP13.15□□□□□ -0.3
CELF1-211ENST00000528434 TSHZ2Q9NRE2 1034 aa13.14□□□□□ -0.31
CELF1-211ENST00000528434 TRIM41Q8WV44 630 aa13.13□□□□□ -0.31
CELF1-211ENST00000528434 HS6ST3Q8IZP7 471 aa13.04□□□□□ -0.32
CELF1-211ENST00000528434 TPRNQ4KMQ1 711 aa13.03□□□□□ -0.32
CELF1-211ENST00000528434 GSE1Q14687 1217 aa13.02□□□□□ -0.33
CELF1-211ENST00000528434 DNAJC5Q9H3Z4 198 aa13□□□□□ -0.33
CELF1-211ENST00000528434 RNF25Q96BH1 459 aaPredicted RBP12.99□□□□□ -0.33
CELF1-211ENST00000528434 NUBP1P53384 320 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms