RNA–Protein interactions for RNA: ENST00000570081.1

TUBGCP4-212, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 4

Gene TUBGCP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-212ENST00000570081 NISCHQ9Y2I1 1504 aa26.24■■□□□ 1.79
TUBGCP4-212ENST00000570081 AEBP2Q6ZN18 517 aaPredicted RBP25.02■■□□□ 1.6
TUBGCP4-212ENST00000570081 CHIC1Q5VXU3 224 aa23.53■■□□□ 1.36
TUBGCP4-212ENST00000570081 CCDC180Q9P1Z9 1646 aa23.19■■□□□ 1.3
TUBGCP4-212ENST00000570081 ABCC9O60706 1549 aa22.74■■□□□ 1.23
TUBGCP4-212ENST00000570081 DCAF8L2P0C7V8 631 aa21.98■■□□□ 1.11
TUBGCP4-212ENST00000570081 ZCCHC6Q5VYS8 1495 aaKnown RBP21.9■■□□□ 1.1
TUBGCP4-212ENST00000570081 RB1CC1Q8TDY2 1594 aa21.8■■□□□ 1.08
TUBGCP4-212ENST00000570081 NACADO15069 1562 aa21.79■■□□□ 1.08
TUBGCP4-212ENST00000570081 MYO15BQ96JP2 1530 aa21.65■■□□□ 1.06
TUBGCP4-212ENST00000570081 DCAF1Q9Y4B6 1507 aa21.64■■□□□ 1.05
TUBGCP4-212ENST00000570081 SENP3Q9H4L4 574 aaPredicted RBP21.58■■□□□ 1.05
TUBGCP4-212ENST00000570081 UNC13AQ9UPW8 1703 aa21.32■■□□□ 1
TUBGCP4-212ENST00000570081 SCRIBQ14160 1630 aa21.31■■□□□ 1
TUBGCP4-212ENST00000570081 PABPN1Q86U42 306 aaKnown RBP eCLIP21.31■■□□□ 1
TUBGCP4-212ENST00000570081 BICRAQ9NZM4 1560 aa21.2■□□□□ 0.98
TUBGCP4-212ENST00000570081 PHF23Q9BUL5 403 aaPredicted RBP21.15■□□□□ 0.98
TUBGCP4-212ENST00000570081 SHROOM4Q9ULL8 1493 aa20.96■□□□□ 0.95
TUBGCP4-212ENST00000570081 DNAJC5BQ9UF47 199 aa20.8■□□□□ 0.92
TUBGCP4-212ENST00000570081 EIF4G1Q04637 1599 aaKnown RBP20.62■□□□□ 0.89
TUBGCP4-212ENST00000570081 CECR2Q9BXF3 1484 aa20.52■□□□□ 0.88
TUBGCP4-212ENST00000570081 CC2D2AQ9P2K1 1620 aa20.52■□□□□ 0.88
TUBGCP4-212ENST00000570081 SMARCA4P51532 1647 aa20.34■□□□□ 0.85
TUBGCP4-212ENST00000570081 BAZ1AQ9NRL2 1556 aaPredicted RBP20.3■□□□□ 0.84
TUBGCP4-212ENST00000570081 MROH2BQ7Z745 1585 aa20.29■□□□□ 0.84
TUBGCP4-212ENST00000570081 ATAD2BQ9ULI0 1458 aa20.22■□□□□ 0.83
TUBGCP4-212ENST00000570081 SMARCA2P51531 1590 aa20.13■□□□□ 0.81
TUBGCP4-212ENST00000570081 NCAPD3P42695 1498 aa20.13■□□□□ 0.81
TUBGCP4-212ENST00000570081 FOXD1Q16676 465 aa20.1■□□□□ 0.81
TUBGCP4-212ENST00000570081 RSF1Q96T23 1441 aaPredicted RBP20.08■□□□□ 0.8
TUBGCP4-212ENST00000570081 PEG3Q9GZU2 1588 aa20.08■□□□□ 0.8
TUBGCP4-212ENST00000570081 WIZO95785 1651 aa20.06■□□□□ 0.8
TUBGCP4-212ENST00000570081 BAZ1BQ9UIG0 1483 aaKnown RBP20.04■□□□□ 0.8
TUBGCP4-212ENST00000570081 HMGXB3Q12766 1538 aa20.03■□□□□ 0.8
TUBGCP4-212ENST00000570081 TOP2AP11388 1531 aaKnown RBP19.81■□□□□ 0.76
TUBGCP4-212ENST00000570081 SUPT5HO00267 1087 aaKnown RBP19.75■□□□□ 0.75
TUBGCP4-212ENST00000570081 POTEDQ86YR6 584 aa19.75■□□□□ 0.75
TUBGCP4-212ENST00000570081 NESP48681 1621 aa19.73■□□□□ 0.75
TUBGCP4-212ENST00000570081 CCDC88BA6NC98 1476 aa19.62■□□□□ 0.73
TUBGCP4-212ENST00000570081 CADPSQ9ULU8 1353 aa19.58■□□□□ 0.73
TUBGCP4-212ENST00000570081 LAMC3Q9Y6N6 1575 aa19.56■□□□□ 0.72
TUBGCP4-212ENST00000570081 ERCC6Q03468 1493 aa19.54■□□□□ 0.72
TUBGCP4-212ENST00000570081 CFTRP13569 1480 aa19.48■□□□□ 0.71
TUBGCP4-212ENST00000570081 PDS5BQ9NTI5 1447 aa19.44■□□□□ 0.7
TUBGCP4-212ENST00000570081 KIF21AQ7Z4S6 1674 aa19.43■□□□□ 0.7
TUBGCP4-212ENST00000570081 FANCD2Q9BXW9 1451 aa19.38■□□□□ 0.69
TUBGCP4-212ENST00000570081 THOC2Q8NI27 1593 aaKnown RBP19.33■□□□□ 0.69
TUBGCP4-212ENST00000570081 CEP164Q9UPV0 1460 aa19.33■□□□□ 0.68
TUBGCP4-212ENST00000570081 MRC2Q9UBG0 1479 aa19.28■□□□□ 0.68
TUBGCP4-212ENST00000570081 PRDM2Q13029 1718 aa19.26■□□□□ 0.67
TUBGCP4-212ENST00000570081 CUX2O14529 1486 aa19.22■□□□□ 0.67
TUBGCP4-212ENST00000570081 URB2Q14146 1524 aaKnown RBP19.2■□□□□ 0.66
TUBGCP4-212ENST00000570081 WDR62O43379 1518 aa19.2■□□□□ 0.66
TUBGCP4-212ENST00000570081 MSH5O43196 834 aa19.17■□□□□ 0.66
TUBGCP4-212ENST00000570081 TOPBP1Q92547 1522 aa19.09■□□□□ 0.65
TUBGCP4-212ENST00000570081 DNMBPQ6XZF7 1577 aa19.04■□□□□ 0.64
TUBGCP4-212ENST00000570081 CUX1P39880 1505 aa19.01■□□□□ 0.63
TUBGCP4-212ENST00000570081 ABCC8Q09428 1581 aa18.98■□□□□ 0.63
TUBGCP4-212ENST00000570081 POLA1P09884 1462 aaPredicted RBP18.94■□□□□ 0.62
TUBGCP4-212ENST00000570081 FGD5Q6ZNL6 1462 aa18.92■□□□□ 0.62
TUBGCP4-212ENST00000570081 WRNQ14191 1432 aaPredicted RBP eCLIP18.91■□□□□ 0.62
TUBGCP4-212ENST00000570081 RAD54L2Q9Y4B4 1467 aa18.91■□□□□ 0.62
TUBGCP4-212ENST00000570081 IFT140Q96RY7 1462 aa18.9■□□□□ 0.62
TUBGCP4-212ENST00000570081 ZNF608Q9ULD9 1512 aaPredicted RBP18.9■□□□□ 0.62
TUBGCP4-212ENST00000570081 SYNJ1O43426 1573 aa18.89■□□□□ 0.62
TUBGCP4-212ENST00000570081 SOGA1O94964 1423 aa18.85■□□□□ 0.61
TUBGCP4-212ENST00000570081 TARBP1Q13395 1621 aaKnown RBP18.85■□□□□ 0.61
TUBGCP4-212ENST00000570081 TOP2BQ02880 1626 aa18.82■□□□□ 0.6
TUBGCP4-212ENST00000570081 BIVM-ERCC5R4GMW8 1640 aa18.82■□□□□ 0.6
TUBGCP4-212ENST00000570081 AQRO60306 1485 aaKnown RBP eCLIP18.79■□□□□ 0.61e-6■■■■□ 19.7
TUBGCP4-212ENST00000570081 TDRD9Q8NDG6 1382 aaKnown RBP18.78■□□□□ 0.6
TUBGCP4-212ENST00000570081 EIF4G3O43432 1585 aaKnown RBP18.77■□□□□ 0.6
TUBGCP4-212ENST00000570081 WDR97A6NE52 1622 aa18.71■□□□□ 0.59
TUBGCP4-212ENST00000570081 PIAS4Q8N2W9 510 aaPredicted RBP18.71■□□□□ 0.59
TUBGCP4-212ENST00000570081 ABCA10Q8WWZ4 1543 aa18.7■□□□□ 0.58
TUBGCP4-212ENST00000570081 GAPVD1Q14C86 1478 aa18.63■□□□□ 0.57
TUBGCP4-212ENST00000570081 ABCA5Q8WWZ7 1642 aa18.63■□□□□ 0.57
TUBGCP4-212ENST00000570081 SNAPC4Q5SXM2 1469 aa18.62■□□□□ 0.57
TUBGCP4-212ENST00000570081 GRIN2BQ13224 1484 aa18.6■□□□□ 0.57
TUBGCP4-212ENST00000570081 TRIM41Q8WV44 630 aa18.57■□□□□ 0.56
TUBGCP4-212ENST00000570081 FBLN2P98095 1184 aa18.56■□□□□ 0.56
TUBGCP4-212ENST00000570081 PBRM1Q86U86 1689 aa18.56■□□□□ 0.56
TUBGCP4-212ENST00000570081 DNAJC5Q9H3Z4 198 aa18.53■□□□□ 0.56
TUBGCP4-212ENST00000570081 MAGI1Q96QZ7 1491 aaPredicted RBP18.51■□□□□ 0.55
TUBGCP4-212ENST00000570081 CHD1O14646 1710 aa18.49■□□□□ 0.55
TUBGCP4-212ENST00000570081 OSCARQ8IYS5 282 aa18.48■□□□□ 0.55
TUBGCP4-212ENST00000570081 KIF27Q86VH2 1401 aa18.48■□□□□ 0.55
TUBGCP4-212ENST00000570081 CHMP7Q8WUX9 453 aaPredicted RBP18.47■□□□□ 0.55
TUBGCP4-212ENST00000570081 RUSC2Q8N2Y8 1516 aa18.47■□□□□ 0.55
TUBGCP4-212ENST00000570081 SYNJ2O15056 1496 aa18.46■□□□□ 0.54
TUBGCP4-212ENST00000570081 ERICH3Q5RHP9 1530 aa18.45■□□□□ 0.54
TUBGCP4-212ENST00000570081 ADAMTS12P58397 1594 aa18.45■□□□□ 0.54
TUBGCP4-212ENST00000570081 IGF1RP08069 1367 aa18.42■□□□□ 0.54
TUBGCP4-212ENST00000570081 FHAD1B1AJZ9 1412 aa18.4■□□□□ 0.54
TUBGCP4-212ENST00000570081 GRIN2AQ12879 1464 aa18.37■□□□□ 0.53
TUBGCP4-212ENST00000570081 CARMIL1Q5VZK9 1371 aa18.31■□□□□ 0.52
TUBGCP4-212ENST00000570081 CEP170Q5SW79 1584 aa18.3■□□□□ 0.52
TUBGCP4-212ENST00000570081 CLASP1Q7Z460 1538 aa18.3■□□□□ 0.52
TUBGCP4-212ENST00000570081 CUL7Q14999 1698 aa18.3■□□□□ 0.52
TUBGCP4-212ENST00000570081 PLPPR3Q6T4P5 718 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms