RNA–Protein interactions for RNA: ENST00000371242.6

RAE1-201, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAE1, Length 2,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-201ENST00000371242 NISCHQ9Y2I1 1504 aa24.2■■□□□ 1.46
RAE1-201ENST00000371242 CCDC180Q9P1Z9 1646 aa20.88■□□□□ 0.93
RAE1-201ENST00000371242 ZCCHC6Q5VYS8 1495 aaKnown RBP20.42■□□□□ 0.86
RAE1-201ENST00000371242 SHROOM4Q9ULL8 1493 aa20.08■□□□□ 0.81
RAE1-201ENST00000371242 DCAF1Q9Y4B6 1507 aa19.99■□□□□ 0.79
RAE1-201ENST00000371242 DCAF8L2P0C7V8 631 aa19.86■□□□□ 0.77
RAE1-201ENST00000371242 ABCC9O60706 1549 aa19.81■□□□□ 0.76
RAE1-201ENST00000371242 MYO15BQ96JP2 1530 aa19.58■□□□□ 0.72
RAE1-201ENST00000371242 SUPT5HO00267 1087 aaKnown RBP19.54■□□□□ 0.72
RAE1-201ENST00000371242 NACADO15069 1562 aa19.33■□□□□ 0.69
RAE1-201ENST00000371242 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
RAE1-201ENST00000371242 RB1CC1Q8TDY2 1594 aa19.08■□□□□ 0.65
RAE1-201ENST00000371242 RSF1Q96T23 1441 aaPredicted RBP18.95■□□□□ 0.62
RAE1-201ENST00000371242 CHIC1Q5VXU3 224 aa18.94■□□□□ 0.62
RAE1-201ENST00000371242 CECR2Q9BXF3 1484 aa18.78■□□□□ 0.6
RAE1-201ENST00000371242 UNC13AQ9UPW8 1703 aa18.78■□□□□ 0.6
RAE1-201ENST00000371242 PABPN1Q86U42 306 aaKnown RBP eCLIP18.74■□□□□ 0.59
RAE1-201ENST00000371242 MROH2BQ7Z745 1585 aa18.73■□□□□ 0.59
RAE1-201ENST00000371242 BAZ1AQ9NRL2 1556 aaPredicted RBP18.64■□□□□ 0.58
RAE1-201ENST00000371242 WIZO95785 1651 aa18.62■□□□□ 0.57
RAE1-201ENST00000371242 BICRAQ9NZM4 1560 aa18.61■□□□□ 0.57
RAE1-201ENST00000371242 SMARCA4P51532 1647 aa18.52■□□□□ 0.55
RAE1-201ENST00000371242 TOP2AP11388 1531 aaKnown RBP18.4■□□□□ 0.54
RAE1-201ENST00000371242 TRIM41Q8WV44 630 aa18.33■□□□□ 0.52
RAE1-201ENST00000371242 EIF4G1Q04637 1599 aaKnown RBP18.3■□□□□ 0.52
RAE1-201ENST00000371242 PEG3Q9GZU2 1588 aa18.27■□□□□ 0.51
RAE1-201ENST00000371242 SMARCA2P51531 1590 aa18.26■□□□□ 0.51
RAE1-201ENST00000371242 LOC105371045A0A1W2PR82 267 aa18.25■□□□□ 0.51
RAE1-201ENST00000371242 CCDC88BA6NC98 1476 aa18.23■□□□□ 0.51
RAE1-201ENST00000371242 ATAD2BQ9ULI0 1458 aa18.09■□□□□ 0.49
RAE1-201ENST00000371242 FAM9AQ8IZU1 332 aaPredicted RBP18.02■□□□□ 0.48
RAE1-201ENST00000371242 ABCC8Q09428 1581 aa18.02■□□□□ 0.47
RAE1-201ENST00000371242 BAZ1BQ9UIG0 1483 aaKnown RBP18.01■□□□□ 0.47
RAE1-201ENST00000371242 PCGF6Q9BYE7 350 aa17.9■□□□□ 0.46
RAE1-201ENST00000371242 HMGXB3Q12766 1538 aa17.86■□□□□ 0.45
RAE1-201ENST00000371242 NCAPD3P42695 1498 aa17.85■□□□□ 0.45
RAE1-201ENST00000371242 CC2D2AQ9P2K1 1620 aa17.84■□□□□ 0.45
RAE1-201ENST00000371242 WRNQ14191 1432 aaPredicted RBP eCLIP17.82■□□□□ 0.44
RAE1-201ENST00000371242 EEA1Q15075 1411 aa17.79■□□□□ 0.44
RAE1-201ENST00000371242 TRIM26Q12899 539 aaPredicted RBP17.76■□□□□ 0.43
RAE1-201ENST00000371242 EHMT2Q96KQ7 1210 aa17.76■□□□□ 0.43
RAE1-201ENST00000371242 SOGA1O94964 1423 aa17.76■□□□□ 0.43
RAE1-201ENST00000371242 SYNJ1O43426 1573 aa17.75■□□□□ 0.43
RAE1-201ENST00000371242 DNAJC5BQ9UF47 199 aa17.74■□□□□ 0.43
RAE1-201ENST00000371242 HRCP23327 699 aa17.74■□□□□ 0.43
RAE1-201ENST00000371242 RUSC2Q8N2Y8 1516 aa17.68■□□□□ 0.42
RAE1-201ENST00000371242 CSRNP3Q8WYN3 585 aa17.66■□□□□ 0.42
RAE1-201ENST00000371242 TOP2BQ02880 1626 aa17.63■□□□□ 0.41
RAE1-201ENST00000371242 BIVM-ERCC5R4GMW8 1640 aa17.61■□□□□ 0.41
RAE1-201ENST00000371242 TNIKQ9UKE5 1360 aa17.61■□□□□ 0.41
RAE1-201ENST00000371242 CFTRP13569 1480 aa17.59■□□□□ 0.41
RAE1-201ENST00000371242 GOLGA3Q08378 1498 aa17.58■□□□□ 0.4
RAE1-201ENST00000371242 KIF21BO75037 1637 aa17.56■□□□□ 0.4
RAE1-201ENST00000371242 CEP162Q5TB80 1403 aa17.56■□□□□ 0.4
RAE1-201ENST00000371242 PRDM2Q13029 1718 aa17.55■□□□□ 0.4
RAE1-201ENST00000371242 CEP164Q9UPV0 1460 aa17.53■□□□□ 0.4
RAE1-201ENST00000371242 UBTFP17480 764 aaKnown RBP17.48■□□□□ 0.39
RAE1-201ENST00000371242 CUX1P39880 1505 aa17.48■□□□□ 0.39
RAE1-201ENST00000371242 CADPSQ9ULU8 1353 aa17.42■□□□□ 0.38
RAE1-201ENST00000371242 RAPGEF2Q9Y4G8 1499 aa17.38■□□□□ 0.37
RAE1-201ENST00000371242 NESP48681 1621 aa17.36■□□□□ 0.37
RAE1-201ENST00000371242 PPARGC1BQ86YN6 1023 aaKnown RBP17.36■□□□□ 0.37
RAE1-201ENST00000371242 ERICH3Q5RHP9 1530 aa17.35■□□□□ 0.37
RAE1-201ENST00000371242 PRXQ9BXM0 1461 aa17.33■□□□□ 0.36
RAE1-201ENST00000371242 KIF27Q86VH2 1401 aa17.32■□□□□ 0.36
RAE1-201ENST00000371242 CLIP1P30622 1438 aa17.31■□□□□ 0.36
RAE1-201ENST00000371242 ZEB1P37275 1124 aaPredicted RBP17.27■□□□□ 0.36
RAE1-201ENST00000371242 FANCD2Q9BXW9 1451 aa17.24■□□□□ 0.35
RAE1-201ENST00000371242 VPS8Q8N3P4 1428 aa17.23■□□□□ 0.35
RAE1-201ENST00000371242 FGD5Q6ZNL6 1462 aa17.21■□□□□ 0.35
RAE1-201ENST00000371242 CUX2O14529 1486 aa17.18■□□□□ 0.34
RAE1-201ENST00000371242 LAMC3Q9Y6N6 1575 aa17.17■□□□□ 0.34
RAE1-201ENST00000371242 DNMBPQ6XZF7 1577 aa17.17■□□□□ 0.34
RAE1-201ENST00000371242 IGF1RP08069 1367 aa17.13■□□□□ 0.33
RAE1-201ENST00000371242 TTBK1Q5TCY1 1321 aaPredicted RBP17.12■□□□□ 0.33
RAE1-201ENST00000371242 TOPBP1Q92547 1522 aa17.11■□□□□ 0.33
RAE1-201ENST00000371242 ARAP1Q96P48 1450 aa17.09■□□□□ 0.33
RAE1-201ENST00000371242 RANGAP1P46060 587 aaPredicted RBP17.07■□□□□ 0.32
RAE1-201ENST00000371242 POLA1P09884 1462 aaPredicted RBP17.07■□□□□ 0.32
RAE1-201ENST00000371242 ABCA10Q8WWZ4 1543 aa17.06■□□□□ 0.32
RAE1-201ENST00000371242 APLP2Q06481 763 aa17.06■□□□□ 0.32
RAE1-201ENST00000371242 KIF21AQ7Z4S6 1674 aa17.05■□□□□ 0.32
RAE1-201ENST00000371242 PDS5BQ9NTI5 1447 aa17.05■□□□□ 0.32
RAE1-201ENST00000371242 CARMIL1Q5VZK9 1371 aa17.05■□□□□ 0.32
RAE1-201ENST00000371242 RAD54L2Q9Y4B4 1467 aa17.02■□□□□ 0.31
RAE1-201ENST00000371242 ARHGAP35Q9NRY4 1499 aa17.01■□□□□ 0.31
RAE1-201ENST00000371242 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.01■□□□□ 0.31
RAE1-201ENST00000371242 URB2Q14146 1524 aaKnown RBP17.01■□□□□ 0.31
RAE1-201ENST00000371242 WDR97A6NE52 1622 aa16.99■□□□□ 0.31
RAE1-201ENST00000371242 CCER1Q8TC90 406 aaPredicted RBP16.98■□□□□ 0.31
RAE1-201ENST00000371242 CUL7Q14999 1698 aa16.96■□□□□ 0.31
RAE1-201ENST00000371242 ERCC6Q03468 1493 aa16.92■□□□□ 0.3
RAE1-201ENST00000371242 ABCA5Q8WWZ7 1642 aa16.9■□□□□ 0.3
RAE1-201ENST00000371242 CTTNBP2Q8WZ74 1663 aa16.86■□□□□ 0.29
RAE1-201ENST00000371242 MRC2Q9UBG0 1479 aa16.86■□□□□ 0.29
RAE1-201ENST00000371242 KANK4Q5T7N3 995 aaPredicted RBP16.85■□□□□ 0.29
RAE1-201ENST00000371242 MAP3K1Q13233 1512 aa16.84■□□□□ 0.29
RAE1-201ENST00000371242 GAPVD1Q14C86 1478 aa16.83■□□□□ 0.28
RAE1-201ENST00000371242 TARBP1Q13395 1621 aaKnown RBP16.83■□□□□ 0.28
RAE1-201ENST00000371242 HNRNPUL2Q1KMD3 747 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms