RNA–Protein interactions for RNA: ENST00000550107.5

PPP1R12A-213, Transcript of protein phosphatase 1 regulatory subunit 12A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R12A, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R12A-213ENST00000550107 NISCHQ9Y2I1 1504 aa18.77■□□□□ 0.6
PPP1R12A-213ENST00000550107 SHROOM4Q9ULL8 1493 aa16.82■□□□□ 0.28
PPP1R12A-213ENST00000550107 SUPT5HO00267 1087 aaKnown RBP16.59■□□□□ 0.25
PPP1R12A-213ENST00000550107 DCAF8L2P0C7V8 631 aa16.3■□□□□ 0.2
PPP1R12A-213ENST00000550107 CCDC180Q9P1Z9 1646 aa15.97■□□□□ 0.15
PPP1R12A-213ENST00000550107 MYO15BQ96JP2 1530 aa15.93■□□□□ 0.14
PPP1R12A-213ENST00000550107 CHIC1Q5VXU3 224 aa15.93■□□□□ 0.14
PPP1R12A-213ENST00000550107 PCGF6Q9BYE7 350 aa15.9■□□□□ 0.14
PPP1R12A-213ENST00000550107 ZCCHC6Q5VYS8 1495 aaKnown RBP15.89■□□□□ 0.13
PPP1R12A-213ENST00000550107 PPARGC1BQ86YN6 1023 aaKnown RBP15.77■□□□□ 0.12
PPP1R12A-213ENST00000550107 HRCP23327 699 aa15.77■□□□□ 0.11
PPP1R12A-213ENST00000550107 LOC105371045A0A1W2PR82 267 aa15.74■□□□□ 0.11
PPP1R12A-213ENST00000550107 EHMT2Q96KQ7 1210 aa15.56■□□□□ 0.08
PPP1R12A-213ENST00000550107 DCAF1Q9Y4B6 1507 aa15.46■□□□□ 0.07
PPP1R12A-213ENST00000550107 FAM9AQ8IZU1 332 aaPredicted RBP15.43■□□□□ 0.06
PPP1R12A-213ENST00000550107 TRIM26Q12899 539 aaPredicted RBP15.26■□□□□ 0.03
PPP1R12A-213ENST00000550107 TRIM41Q8WV44 630 aa15.23■□□□□ 0.03
PPP1R12A-213ENST00000550107 SCRIBQ14160 1630 aa15.12■□□□□ 0.01
PPP1R12A-213ENST00000550107 RSF1Q96T23 1441 aaPredicted RBP15.05■□□□□ 0
PPP1R12A-213ENST00000550107 TTBK1Q5TCY1 1321 aaPredicted RBP15.05■□□□□ -0
PPP1R12A-213ENST00000550107 ABCC9O60706 1549 aa14.99□□□□□ -0.01
PPP1R12A-213ENST00000550107 RB1CC1Q8TDY2 1594 aa14.97□□□□□ -0.01
PPP1R12A-213ENST00000550107 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.9□□□□□ -0.02
PPP1R12A-213ENST00000550107 CECR2Q9BXF3 1484 aa14.87□□□□□ -0.03
PPP1R12A-213ENST00000550107 ZEB1P37275 1124 aaPredicted RBP14.86□□□□□ -0.03
PPP1R12A-213ENST00000550107 SCAF1Q9H7N4 1312 aaKnown RBP14.8□□□□□ -0.04
PPP1R12A-213ENST00000550107 CCER1Q8TC90 406 aaPredicted RBP14.79□□□□□ -0.04
PPP1R12A-213ENST00000550107 NACADO15069 1562 aa14.75□□□□□ -0.05
PPP1R12A-213ENST00000550107 MROH2BQ7Z745 1585 aa14.75□□□□□ -0.05
PPP1R12A-213ENST00000550107 WIZO95785 1651 aa14.69□□□□□ -0.06
PPP1R12A-213ENST00000550107 RANGAP1P46060 587 aaPredicted RBP14.58□□□□□ -0.08
PPP1R12A-213ENST00000550107 UBTFP17480 764 aaKnown RBP14.58□□□□□ -0.08
PPP1R12A-213ENST00000550107 NEUROD1Q13562 356 aa14.58□□□□□ -0.08
PPP1R12A-213ENST00000550107 ABCC8Q09428 1581 aa14.56□□□□□ -0.08
PPP1R12A-213ENST00000550107 DIEXFQ68CQ4 756 aaKnown RBP14.54□□□□□ -0.08
PPP1R12A-213ENST00000550107 YTHDC1Q96MU7 727 aaKnown RBP14.51□□□□□ -0.09
PPP1R12A-213ENST00000550107 CCDC88BA6NC98 1476 aa14.51□□□□□ -0.09
PPP1R12A-213ENST00000550107 PABPN1Q86U42 306 aaKnown RBP eCLIP14.49□□□□□ -0.09
PPP1R12A-213ENST00000550107 SOGA1O94964 1423 aa14.49□□□□□ -0.09
PPP1R12A-213ENST00000550107 ACIN1Q9UKV3 1341 aaKnown RBP14.48□□□□□ -0.09
PPP1R12A-213ENST00000550107 GTF3C3Q9Y5Q9 886 aa14.48□□□□□ -0.09
PPP1R12A-213ENST00000550107 HNRNPUL2Q1KMD3 747 aaKnown RBP14.46□□□□□ -0.09
PPP1R12A-213ENST00000550107 BAZ1AQ9NRL2 1556 aaPredicted RBP14.43□□□□□ -0.1
PPP1R12A-213ENST00000550107 RUSC2Q8N2Y8 1516 aa14.43□□□□□ -0.1
PPP1R12A-213ENST00000550107 CEP162Q5TB80 1403 aa14.42□□□□□ -0.1
PPP1R12A-213ENST00000550107 CSRNP3Q8WYN3 585 aa14.39□□□□□ -0.11
PPP1R12A-213ENST00000550107 EIF4G1Q04637 1599 aaKnown RBP14.37□□□□□ -0.11
PPP1R12A-213ENST00000550107 PELP1Q8IZL8 1130 aaKnown RBP14.36□□□□□ -0.11
PPP1R12A-213ENST00000550107 CENPBP07199 599 aaPredicted RBP14.34□□□□□ -0.11
PPP1R12A-213ENST00000550107 TOP2AP11388 1531 aaKnown RBP14.29□□□□□ -0.12
PPP1R12A-213ENST00000550107 ZNF316A6NFI3 1004 aaPredicted RBP14.28□□□□□ -0.12
PPP1R12A-213ENST00000550107 SMARCA4P51532 1647 aa14.28□□□□□ -0.12
PPP1R12A-213ENST00000550107 UNC13AQ9UPW8 1703 aa14.27□□□□□ -0.13
PPP1R12A-213ENST00000550107 MIER1Q8N108 512 aa14.26□□□□□ -0.13
PPP1R12A-213ENST00000550107 TNIKQ9UKE5 1360 aa14.26□□□□□ -0.13
PPP1R12A-213ENST00000550107 SMARCA2P51531 1590 aa14.26□□□□□ -0.13
PPP1R12A-213ENST00000550107 WRNQ14191 1432 aaPredicted RBP eCLIP14.22□□□□□ -0.13
PPP1R12A-213ENST00000550107 APLP2Q06481 763 aa14.21□□□□□ -0.14
PPP1R12A-213ENST00000550107 GOLGA3Q08378 1498 aa14.14□□□□□ -0.15
PPP1R12A-213ENST00000550107 ITGAEP38570 1179 aa14.12□□□□□ -0.15
PPP1R12A-213ENST00000550107 CLIP1P30622 1438 aa14.11□□□□□ -0.15
PPP1R12A-213ENST00000550107 BICRAQ9NZM4 1560 aa14.09□□□□□ -0.15
PPP1R12A-213ENST00000550107 RAPGEF2Q9Y4G8 1499 aa14.05□□□□□ -0.16
PPP1R12A-213ENST00000550107 EEA1Q15075 1411 aa14.05□□□□□ -0.16
PPP1R12A-213ENST00000550107 SYNJ1O43426 1573 aa14.05□□□□□ -0.16
PPP1R12A-213ENST00000550107 PEG3Q9GZU2 1588 aa14.05□□□□□ -0.16
PPP1R12A-213ENST00000550107 CEP164Q9UPV0 1460 aa14.02□□□□□ -0.17
PPP1R12A-213ENST00000550107 KANK4Q5T7N3 995 aaPredicted RBP14.01□□□□□ -0.17
PPP1R12A-213ENST00000550107 VPS8Q8N3P4 1428 aa13.97□□□□□ -0.17
PPP1R12A-213ENST00000550107 BAZ1BQ9UIG0 1483 aaKnown RBP13.92□□□□□ -0.18
PPP1R12A-213ENST00000550107 ATAD2BQ9ULI0 1458 aa13.9□□□□□ -0.18
PPP1R12A-213ENST00000550107 KIF21BO75037 1637 aa13.9□□□□□ -0.18
PPP1R12A-213ENST00000550107 ATP1B4Q9UN42 357 aaPredicted RBP13.9□□□□□ -0.18
PPP1R12A-213ENST00000550107 KCNH8Q96L42 1107 aa13.88□□□□□ -0.19
PPP1R12A-213ENST00000550107 DHX57Q6P158 1386 aaKnown RBP13.86□□□□□ -0.19
PPP1R12A-213ENST00000550107 P3H3Q8IVL6 736 aa13.84□□□□□ -0.19
PPP1R12A-213ENST00000550107 HIRIP3Q9BW71 556 aaPredicted RBP13.84□□□□□ -0.19
PPP1R12A-213ENST00000550107 BCANQ96GW7 911 aa13.83□□□□□ -0.2
PPP1R12A-213ENST00000550107 SUPT16HQ9Y5B9 1047 aaKnown RBP13.79□□□□□ -0.2
PPP1R12A-213ENST00000550107 ARAP1Q96P48 1450 aa13.78□□□□□ -0.2
PPP1R12A-213ENST00000550107 FAM50AQ14320 339 aaKnown RBP13.78□□□□□ -0.2
PPP1R12A-213ENST00000550107 SIN3AQ96ST3 1273 aa13.76□□□□□ -0.21
PPP1R12A-213ENST00000550107 DDX10Q13206 875 aaKnown RBP13.74□□□□□ -0.21
PPP1R12A-213ENST00000550107 TOP2BQ02880 1626 aa13.72□□□□□ -0.21
PPP1R12A-213ENST00000550107 CCNB3Q8WWL7 1395 aa13.7□□□□□ -0.22
PPP1R12A-213ENST00000550107 PRXQ9BXM0 1461 aa13.69□□□□□ -0.22
PPP1R12A-213ENST00000550107 BIVM-ERCC5R4GMW8 1640 aa13.69□□□□□ -0.22
PPP1R12A-213ENST00000550107 RAB3GAP2Q9H2M9 1393 aa13.67□□□□□ -0.22
PPP1R12A-213ENST00000550107 CUX1P39880 1505 aa13.67□□□□□ -0.22
PPP1R12A-213ENST00000550107 KIF27Q86VH2 1401 aa13.67□□□□□ -0.22
PPP1R12A-213ENST00000550107 HMGXB3Q12766 1538 aa13.64□□□□□ -0.23
PPP1R12A-213ENST00000550107 NCAPD3P42695 1498 aa13.64□□□□□ -0.23
PPP1R12A-213ENST00000550107 ARHGAP35Q9NRY4 1499 aa13.64□□□□□ -0.23
PPP1R12A-213ENST00000550107 TRIM52Q96A61 297 aa13.64□□□□□ -0.23
PPP1R12A-213ENST00000550107 CLSPNQ9HAW4 1339 aa13.64□□□□□ -0.23
PPP1R12A-213ENST00000550107 FKBP8Q14318 412 aa13.63□□□□□ -0.23
PPP1R12A-213ENST00000550107 TSHZ2Q9NRE2 1034 aa13.61□□□□□ -0.23
PPP1R12A-213ENST00000550107 ERICH3Q5RHP9 1530 aa13.61□□□□□ -0.23
PPP1R12A-213ENST00000550107 RRBP1Q9P2E9 1410 aaKnown RBP13.61□□□□□ -0.23
PPP1R12A-213ENST00000550107 CUX2O14529 1486 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms