RNA–Protein interactions for RNA: ENST00000520361.5

TBCA-208, Transcript of tubulin folding cofactor A, humanhuman

TSL 2 BASIC

Gene TBCA, Length 446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBCA-208ENST00000520361 NISCHQ9Y2I1 1504 aa23.14■■□□□ 1.3
TBCA-208ENST00000520361 AEBP2Q6ZN18 517 aaPredicted RBP21.82■■□□□ 1.08
TBCA-208ENST00000520361 CHIC1Q5VXU3 224 aa21.18■□□□□ 0.98
TBCA-208ENST00000520361 CCDC180Q9P1Z9 1646 aa20.62■□□□□ 0.89
TBCA-208ENST00000520361 ABCC9O60706 1549 aa20.22■□□□□ 0.83
TBCA-208ENST00000520361 RB1CC1Q8TDY2 1594 aa19.42■□□□□ 0.7
TBCA-208ENST00000520361 NACADO15069 1562 aa19.4■□□□□ 0.7
TBCA-208ENST00000520361 MYO15BQ96JP2 1530 aa19.29■□□□□ 0.68
TBCA-208ENST00000520361 ZCCHC6Q5VYS8 1495 aaKnown RBP19.27■□□□□ 0.67
TBCA-208ENST00000520361 DCAF8L2P0C7V8 631 aa19.23■□□□□ 0.67
TBCA-208ENST00000520361 DCAF1Q9Y4B6 1507 aa19.17■□□□□ 0.66
TBCA-208ENST00000520361 UNC13AQ9UPW8 1703 aa19.05■□□□□ 0.64
TBCA-208ENST00000520361 BICRAQ9NZM4 1560 aa18.9■□□□□ 0.62
TBCA-208ENST00000520361 PABPN1Q86U42 306 aaKnown RBP eCLIP18.86■□□□□ 0.61
TBCA-208ENST00000520361 SCRIBQ14160 1630 aa18.78■□□□□ 0.6
TBCA-208ENST00000520361 SENP3Q9H4L4 574 aaPredicted RBP18.7■□□□□ 0.58
TBCA-208ENST00000520361 DNAJC5BQ9UF47 199 aa18.69■□□□□ 0.58
TBCA-208ENST00000520361 SHROOM4Q9ULL8 1493 aa18.67■□□□□ 0.58
TBCA-208ENST00000520361 PHF23Q9BUL5 403 aaPredicted RBP18.51■□□□□ 0.55
TBCA-208ENST00000520361 POTEDQ86YR6 584 aa18.37■□□□□ 0.53
TBCA-208ENST00000520361 EIF4G1Q04637 1599 aaKnown RBP18.37■□□□□ 0.53
TBCA-208ENST00000520361 CC2D2AQ9P2K1 1620 aa18.31■□□□□ 0.52
TBCA-208ENST00000520361 CECR2Q9BXF3 1484 aa18.18■□□□□ 0.5
TBCA-208ENST00000520361 SMARCA4P51532 1647 aa17.98■□□□□ 0.47
TBCA-208ENST00000520361 BAZ1AQ9NRL2 1556 aaPredicted RBP17.92■□□□□ 0.46
TBCA-208ENST00000520361 NCAPD3P42695 1498 aa17.91■□□□□ 0.46
TBCA-208ENST00000520361 ATAD2BQ9ULI0 1458 aa17.9■□□□□ 0.46
TBCA-208ENST00000520361 SMARCA2P51531 1590 aa17.86■□□□□ 0.45
TBCA-208ENST00000520361 MROH2BQ7Z745 1585 aa17.84■□□□□ 0.45
TBCA-208ENST00000520361 PEG3Q9GZU2 1588 aa17.83■□□□□ 0.45
TBCA-208ENST00000520361 HMGXB3Q12766 1538 aa17.82■□□□□ 0.44
TBCA-208ENST00000520361 BAZ1BQ9UIG0 1483 aaKnown RBP17.71■□□□□ 0.43
TBCA-208ENST00000520361 WIZO95785 1651 aa17.63■□□□□ 0.41
TBCA-208ENST00000520361 FOXD1Q16676 465 aa17.62■□□□□ 0.41
TBCA-208ENST00000520361 RSF1Q96T23 1441 aaPredicted RBP17.6■□□□□ 0.41
TBCA-208ENST00000520361 NESP48681 1621 aa17.5■□□□□ 0.39
TBCA-208ENST00000520361 TOP2AP11388 1531 aaKnown RBP17.44■□□□□ 0.38
TBCA-208ENST00000520361 LAMC3Q9Y6N6 1575 aa17.44■□□□□ 0.38
TBCA-208ENST00000520361 ERCC6Q03468 1493 aa17.4■□□□□ 0.38
TBCA-208ENST00000520361 CADPSQ9ULU8 1353 aa17.36■□□□□ 0.37
TBCA-208ENST00000520361 CUX2O14529 1486 aa17.31■□□□□ 0.36
TBCA-208ENST00000520361 PLPPR3Q6T4P5 718 aa17.3■□□□□ 0.36
TBCA-208ENST00000520361 KIF21AQ7Z4S6 1674 aa17.29■□□□□ 0.36
TBCA-208ENST00000520361 PDS5BQ9NTI5 1447 aa17.29■□□□□ 0.36
TBCA-208ENST00000520361 THOC2Q8NI27 1593 aaKnown RBP17.28■□□□□ 0.36
TBCA-208ENST00000520361 CFTRP13569 1480 aa17.26■□□□□ 0.35
TBCA-208ENST00000520361 CCDC88BA6NC98 1476 aa17.23■□□□□ 0.35
TBCA-208ENST00000520361 FANCD2Q9BXW9 1451 aa17.16■□□□□ 0.34
TBCA-208ENST00000520361 MRC2Q9UBG0 1479 aa17.14■□□□□ 0.33
TBCA-208ENST00000520361 PRDM2Q13029 1718 aa17.13■□□□□ 0.33
TBCA-208ENST00000520361 CEP164Q9UPV0 1460 aa17.13■□□□□ 0.33
TBCA-208ENST00000520361 WDR62O43379 1518 aa17.11■□□□□ 0.33
TBCA-208ENST00000520361 URB2Q14146 1524 aaKnown RBP17.02■□□□□ 0.32
TBCA-208ENST00000520361 SUPT5HO00267 1087 aaKnown RBP16.98■□□□□ 0.31
TBCA-208ENST00000520361 TOPBP1Q92547 1522 aa16.89■□□□□ 0.29
TBCA-208ENST00000520361 DNAJC5Q9H3Z4 198 aa16.87■□□□□ 0.29
TBCA-208ENST00000520361 DNMBPQ6XZF7 1577 aa16.86■□□□□ 0.29
TBCA-208ENST00000520361 MSH5O43196 834 aa16.85■□□□□ 0.29
TBCA-208ENST00000520361 ABCC8Q09428 1581 aa16.85■□□□□ 0.29
TBCA-208ENST00000520361 IFT140Q96RY7 1462 aa16.79■□□□□ 0.28
TBCA-208ENST00000520361 CUX1P39880 1505 aa16.75■□□□□ 0.27
TBCA-208ENST00000520361 ZNF608Q9ULD9 1512 aaPredicted RBP16.75■□□□□ 0.27
TBCA-208ENST00000520361 TARBP1Q13395 1621 aaKnown RBP16.74■□□□□ 0.27
TBCA-208ENST00000520361 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
TBCA-208ENST00000520361 EIF4G3O43432 1585 aaKnown RBP16.67■□□□□ 0.26
TBCA-208ENST00000520361 FGD5Q6ZNL6 1462 aa16.67■□□□□ 0.26
TBCA-208ENST00000520361 RAD54L2Q9Y4B4 1467 aa16.66■□□□□ 0.26
TBCA-208ENST00000520361 SOGA1O94964 1423 aa16.63■□□□□ 0.25
TBCA-208ENST00000520361 AQRO60306 1485 aaKnown RBP eCLIP16.61■□□□□ 0.252e-6■■□□□ 13.5
TBCA-208ENST00000520361 WDR97A6NE52 1622 aa16.59■□□□□ 0.25
TBCA-208ENST00000520361 TOP2BQ02880 1626 aa16.57■□□□□ 0.24
TBCA-208ENST00000520361 BIVM-ERCC5R4GMW8 1640 aa16.57■□□□□ 0.24
TBCA-208ENST00000520361 SYNJ1O43426 1573 aa16.56■□□□□ 0.24
TBCA-208ENST00000520361 WRNQ14191 1432 aaPredicted RBP eCLIP16.56■□□□□ 0.24
TBCA-208ENST00000520361 TDRD9Q8NDG6 1382 aaKnown RBP16.56■□□□□ 0.24
TBCA-208ENST00000520361 ABCA10Q8WWZ4 1543 aa16.53■□□□□ 0.24
TBCA-208ENST00000520361 OSCARQ8IYS5 282 aa16.52■□□□□ 0.24
TBCA-208ENST00000520361 ABCA5Q8WWZ7 1642 aa16.48■□□□□ 0.23
TBCA-208ENST00000520361 CHD1O14646 1710 aa16.48■□□□□ 0.23
TBCA-208ENST00000520361 GRIN2BQ13224 1484 aa16.47■□□□□ 0.23
TBCA-208ENST00000520361 SNAPC4Q5SXM2 1469 aa16.46■□□□□ 0.23
TBCA-208ENST00000520361 GAPVD1Q14C86 1478 aa16.45■□□□□ 0.22
TBCA-208ENST00000520361 PBRM1Q86U86 1689 aa16.44■□□□□ 0.22
TBCA-208ENST00000520361 MAGI1Q96QZ7 1491 aaPredicted RBP16.44■□□□□ 0.22
TBCA-208ENST00000520361 ADRA2BP18089 450 aa16.38■□□□□ 0.21
TBCA-208ENST00000520361 SYNJ2O15056 1496 aa16.37■□□□□ 0.21
TBCA-208ENST00000520361 FBLN2P98095 1184 aa16.35■□□□□ 0.21
TBCA-208ENST00000520361 RIMBP3CA6NJZ7 1639 aa16.33■□□□□ 0.2
TBCA-208ENST00000520361 RIMBP3BA6NNM3 1639 aa16.33■□□□□ 0.2
TBCA-208ENST00000520361 RIMBP3Q9UFD9 1639 aa16.33■□□□□ 0.2
TBCA-208ENST00000520361 ADAMTS12P58397 1594 aa16.32■□□□□ 0.2
TBCA-208ENST00000520361 ERICH3Q5RHP9 1530 aa16.32■□□□□ 0.2
TBCA-208ENST00000520361 CLASP1Q7Z460 1538 aa16.32■□□□□ 0.2
TBCA-208ENST00000520361 CHMP7Q8WUX9 453 aaPredicted RBP16.32■□□□□ 0.2
TBCA-208ENST00000520361 PPP6R1Q9UPN7 881 aa16.32■□□□□ 0.2
TBCA-208ENST00000520361 ARHGEF11O15085 1522 aa16.3■□□□□ 0.2
TBCA-208ENST00000520361 FHAD1B1AJZ9 1412 aa16.27■□□□□ 0.19
TBCA-208ENST00000520361 GRIN2AQ12879 1464 aa16.26■□□□□ 0.19
TBCA-208ENST00000520361 NUP160Q12769 1436 aa16.22■□□□□ 0.19
TBCA-208ENST00000520361 CEP170Q5SW79 1584 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms