RNA–Protein interactions for RNA: ENST00000537103.2

IFT88-207, Transcript of intraflagellar transport 88, humanhuman

TSL 5

Gene IFT88, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-207ENST00000537103 NISCHQ9Y2I1 1504 aa15.89■□□□□ 0.13
IFT88-207ENST00000537103 CHIC1Q5VXU3 224 aa14.42□□□□□ -0.1
IFT88-207ENST00000537103 AEBP2Q6ZN18 517 aaPredicted RBP14.3□□□□□ -0.12
IFT88-207ENST00000537103 CCDC180Q9P1Z9 1646 aa14.25□□□□□ -0.13
IFT88-207ENST00000537103 MYO15BQ96JP2 1530 aa13.43□□□□□ -0.26
IFT88-207ENST00000537103 DCAF1Q9Y4B6 1507 aa13.38□□□□□ -0.27
IFT88-207ENST00000537103 ABCC9O60706 1549 aa13.35□□□□□ -0.27
IFT88-207ENST00000537103 ZCCHC6Q5VYS8 1495 aaKnown RBP13.31□□□□□ -0.28
IFT88-207ENST00000537103 NACADO15069 1562 aa13.3□□□□□ -0.28
IFT88-207ENST00000537103 RB1CC1Q8TDY2 1594 aa13.22□□□□□ -0.29
IFT88-207ENST00000537103 SHROOM4Q9ULL8 1493 aa12.95□□□□□ -0.34
IFT88-207ENST00000537103 PHF23Q9BUL5 403 aaPredicted RBP12.87□□□□□ -0.35
IFT88-207ENST00000537103 UNC13AQ9UPW8 1703 aa12.81□□□□□ -0.36
IFT88-207ENST00000537103 BICRAQ9NZM4 1560 aa12.73□□□□□ -0.37
IFT88-207ENST00000537103 DCAF8L2P0C7V8 631 aa12.71□□□□□ -0.38
IFT88-207ENST00000537103 SCRIBQ14160 1630 aa12.68□□□□□ -0.38
IFT88-207ENST00000537103 EIF4G1Q04637 1599 aaKnown RBP12.37□□□□□ -0.43
IFT88-207ENST00000537103 PABPN1Q86U42 306 aaKnown RBP eCLIP12.36□□□□□ -0.43
IFT88-207ENST00000537103 BAZ1AQ9NRL2 1556 aaPredicted RBP12.35□□□□□ -0.43
IFT88-207ENST00000537103 EHMT2Q96KQ7 1210 aa12.33□□□□□ -0.44
IFT88-207ENST00000537103 PEG3Q9GZU2 1588 aa12.33□□□□□ -0.44
IFT88-207ENST00000537103 SMARCA4P51532 1647 aa12.3□□□□□ -0.44
IFT88-207ENST00000537103 SMARCA2P51531 1590 aa12.25□□□□□ -0.45
IFT88-207ENST00000537103 SLC24A1O60721 1099 aa12.24□□□□□ -0.45
IFT88-207ENST00000537103 CC2D2AQ9P2K1 1620 aa12.23□□□□□ -0.45
IFT88-207ENST00000537103 HMGXB3Q12766 1538 aa12.22□□□□□ -0.45
IFT88-207ENST00000537103 NCAPD3P42695 1498 aa12.21□□□□□ -0.46
IFT88-207ENST00000537103 CECR2Q9BXF3 1484 aa12.17□□□□□ -0.46
IFT88-207ENST00000537103 ATAD2BQ9ULI0 1458 aa12.15□□□□□ -0.46
IFT88-207ENST00000537103 MROH2BQ7Z745 1585 aa12.13□□□□□ -0.47
IFT88-207ENST00000537103 RSF1Q96T23 1441 aaPredicted RBP12.08□□□□□ -0.48
IFT88-207ENST00000537103 TOP2AP11388 1531 aaKnown RBP12.05□□□□□ -0.48
IFT88-207ENST00000537103 BAZ1BQ9UIG0 1483 aaKnown RBP12.04□□□□□ -0.48
IFT88-207ENST00000537103 WIZO95785 1651 aa11.99□□□□□ -0.49
IFT88-207ENST00000537103 DNAJC5BQ9UF47 199 aa11.99□□□□□ -0.49
IFT88-207ENST00000537103 PLPPR3Q6T4P5 718 aa11.94□□□□□ -0.5
IFT88-207ENST00000537103 LAMC3Q9Y6N6 1575 aa11.89□□□□□ -0.51
IFT88-207ENST00000537103 SENP3Q9H4L4 574 aaPredicted RBP11.85□□□□□ -0.51
IFT88-207ENST00000537103 PRDM2Q13029 1718 aa11.84□□□□□ -0.51
IFT88-207ENST00000537103 CFTRP13569 1480 aa11.79□□□□□ -0.52
IFT88-207ENST00000537103 CADPSQ9ULU8 1353 aa11.77□□□□□ -0.53
IFT88-207ENST00000537103 CCDC88BA6NC98 1476 aa11.77□□□□□ -0.53
IFT88-207ENST00000537103 PDS5BQ9NTI5 1447 aa11.73□□□□□ -0.53
IFT88-207ENST00000537103 ABCC8Q09428 1581 aa11.65□□□□□ -0.54
IFT88-207ENST00000537103 KCNA4P22459 653 aa11.64□□□□□ -0.55
IFT88-207ENST00000537103 CUX2O14529 1486 aa11.62□□□□□ -0.55
IFT88-207ENST00000537103 THOC2Q8NI27 1593 aaKnown RBP11.62□□□□□ -0.55
IFT88-207ENST00000537103 CEP164Q9UPV0 1460 aa11.61□□□□□ -0.55
IFT88-207ENST00000537103 FANCD2Q9BXW9 1451 aa11.61□□□□□ -0.55
IFT88-207ENST00000537103 WDR62O43379 1518 aa11.6□□□□□ -0.55
IFT88-207ENST00000537103 MRC2Q9UBG0 1479 aa11.6□□□□□ -0.55
IFT88-207ENST00000537103 KIF21AQ7Z4S6 1674 aa11.6□□□□□ -0.55
IFT88-207ENST00000537103 NESP48681 1621 aa11.59□□□□□ -0.55
IFT88-207ENST00000537103 ERCC6Q03468 1493 aa11.57□□□□□ -0.56
IFT88-207ENST00000537103 CSRNP3Q8WYN3 585 aa11.57□□□□□ -0.56
IFT88-207ENST00000537103 WDR97A6NE52 1622 aa11.55□□□□□ -0.56
IFT88-207ENST00000537103 SUPT5HO00267 1087 aaKnown RBP11.55□□□□□ -0.56
IFT88-207ENST00000537103 DNMBPQ6XZF7 1577 aa11.54□□□□□ -0.56
IFT88-207ENST00000537103 RTN4Q9NQC3 1192 aaKnown RBP11.52□□□□□ -0.57
IFT88-207ENST00000537103 BIVM-ERCC5R4GMW8 1640 aa11.5□□□□□ -0.57
IFT88-207ENST00000537103 URB2Q14146 1524 aaKnown RBP11.47□□□□□ -0.57
IFT88-207ENST00000537103 TOPBP1Q92547 1522 aa11.46□□□□□ -0.57
IFT88-207ENST00000537103 TOP2BQ02880 1626 aa11.45□□□□□ -0.58
IFT88-207ENST00000537103 IFT140Q96RY7 1462 aa11.43□□□□□ -0.58
IFT88-207ENST00000537103 CUX1P39880 1505 aa11.41□□□□□ -0.58
IFT88-207ENST00000537103 WRNQ14191 1432 aaPredicted RBP eCLIP11.39□□□□□ -0.59
IFT88-207ENST00000537103 TARBP1Q13395 1621 aaKnown RBP11.37□□□□□ -0.59
IFT88-207ENST00000537103 ADRA2BP18089 450 aa11.36□□□□□ -0.59
IFT88-207ENST00000537103 POLA1P09884 1462 aaPredicted RBP11.35□□□□□ -0.59
IFT88-207ENST00000537103 ABCA10Q8WWZ4 1543 aa11.34□□□□□ -0.59
IFT88-207ENST00000537103 SYNJ1O43426 1573 aa11.34□□□□□ -0.59
IFT88-207ENST00000537103 FGD5Q6ZNL6 1462 aa11.33□□□□□ -0.6
IFT88-207ENST00000537103 ABCA5Q8WWZ7 1642 aa11.29□□□□□ -0.6
IFT88-207ENST00000537103 SOGA1O94964 1423 aa11.28□□□□□ -0.6
IFT88-207ENST00000537103 ERICH3Q5RHP9 1530 aa11.25□□□□□ -0.61
IFT88-207ENST00000537103 EIF4G3O43432 1585 aaKnown RBP11.25□□□□□ -0.61
IFT88-207ENST00000537103 AMER1Q5JTC6 1135 aaPredicted RBP11.24□□□□□ -0.61
IFT88-207ENST00000537103 MAGI1Q96QZ7 1491 aaPredicted RBP11.23□□□□□ -0.61
IFT88-207ENST00000537103 EEA1Q15075 1411 aa11.22□□□□□ -0.61
IFT88-207ENST00000537103 GRIN2BQ13224 1484 aa11.22□□□□□ -0.61
IFT88-207ENST00000537103 PBRM1Q86U86 1689 aa11.22□□□□□ -0.61
IFT88-207ENST00000537103 CUL7Q14999 1698 aa11.2□□□□□ -0.62
IFT88-207ENST00000537103 PPP6R1Q9UPN7 881 aa11.19□□□□□ -0.62
IFT88-207ENST00000537103 GAPVD1Q14C86 1478 aa11.18□□□□□ -0.62
IFT88-207ENST00000537103 KIF27Q86VH2 1401 aa11.18□□□□□ -0.62
IFT88-207ENST00000537103 RAD54L2Q9Y4B4 1467 aa11.18□□□□□ -0.62
IFT88-207ENST00000537103 SLC4A1APQ9BWU0 796 aaKnown RBP11.17□□□□□ -0.62
IFT88-207ENST00000537103 ZNF608Q9ULD9 1512 aaPredicted RBP11.15□□□□□ -0.62
IFT88-207ENST00000537103 ADAMTS12P58397 1594 aa11.15□□□□□ -0.62
IFT88-207ENST00000537103 SYNJ2O15056 1496 aa11.13□□□□□ -0.63
IFT88-207ENST00000537103 FHAD1B1AJZ9 1412 aa11.12□□□□□ -0.63
IFT88-207ENST00000537103 SNAPC4Q5SXM2 1469 aa11.09□□□□□ -0.63
IFT88-207ENST00000537103 AQRO60306 1485 aaKnown RBP eCLIP11.09□□□□□ -0.63
IFT88-207ENST00000537103 TRIM41Q8WV44 630 aa11.07□□□□□ -0.64
IFT88-207ENST00000537103 TDRD9Q8NDG6 1382 aaKnown RBP11.07□□□□□ -0.64
IFT88-207ENST00000537103 IGF1RP08069 1367 aa11.06□□□□□ -0.64
IFT88-207ENST00000537103 FOXD1Q16676 465 aa11.05□□□□□ -0.64
IFT88-207ENST00000537103 CHD1O14646 1710 aa11.05□□□□□ -0.64
IFT88-207ENST00000537103 KIF21BO75037 1637 aa11.05□□□□□ -0.64
IFT88-207ENST00000537103 NUP160Q12769 1436 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms