RNA–Protein interactions for RNA: ENST00000622017.4

TRO-225, Transcript of trophinin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRO, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-225ENST00000622017 NISCHQ9Y2I1 1504 aa31.93■■■□□ 2.7
TRO-225ENST00000622017 CCDC180Q9P1Z9 1646 aa28.29■■■□□ 2.12
TRO-225ENST00000622017 ABCC9O60706 1549 aa27.57■■■□□ 2
TRO-225ENST00000622017 DCAF8L2P0C7V8 631 aa26.87■■□□□ 1.89
TRO-225ENST00000622017 RB1CC1Q8TDY2 1594 aa26.59■■□□□ 1.85
TRO-225ENST00000622017 ZCCHC6Q5VYS8 1495 aaKnown RBP26.58■■□□□ 1.85
TRO-225ENST00000622017 NACADO15069 1562 aa26.58■■□□□ 1.85
TRO-225ENST00000622017 MYO15BQ96JP2 1530 aa26.41■■□□□ 1.82
TRO-225ENST00000622017 DCAF1Q9Y4B6 1507 aa26.38■■□□□ 1.81
TRO-225ENST00000622017 UNC13AQ9UPW8 1703 aa25.99■■□□□ 1.75
TRO-225ENST00000622017 SCRIBQ14160 1630 aa25.88■■□□□ 1.73
TRO-225ENST00000622017 PABPN1Q86U42 306 aaKnown RBP eCLIP25.85■■□□□ 1.734e-7■■□□□ 14.5
TRO-225ENST00000622017 BICRAQ9NZM4 1560 aa25.68■■□□□ 1.7
TRO-225ENST00000622017 SHROOM4Q9ULL8 1493 aa25.46■■□□□ 1.67
TRO-225ENST00000622017 DNAJC5BQ9UF47 199 aa25.1■■□□□ 1.61
TRO-225ENST00000622017 EIF4G1Q04637 1599 aaKnown RBP25.05■■□□□ 1.6
TRO-225ENST00000622017 CC2D2AQ9P2K1 1620 aa24.92■■□□□ 1.58
TRO-225ENST00000622017 CECR2Q9BXF3 1484 aa24.85■■□□□ 1.57
TRO-225ENST00000622017 BAZ1AQ9NRL2 1556 aaPredicted RBP24.76■■□□□ 1.55
TRO-225ENST00000622017 SMARCA4P51532 1647 aa24.74■■□□□ 1.55
TRO-225ENST00000622017 MROH2BQ7Z745 1585 aa24.6■■□□□ 1.53
TRO-225ENST00000622017 SMARCA2P51531 1590 aa24.56■■□□□ 1.52
TRO-225ENST00000622017 ATAD2BQ9ULI0 1458 aa24.55■■□□□ 1.52
TRO-225ENST00000622017 NCAPD3P42695 1498 aa24.5■■□□□ 1.51
TRO-225ENST00000622017 PEG3Q9GZU2 1588 aa24.44■■□□□ 1.5
TRO-225ENST00000622017 BAZ1BQ9UIG0 1483 aaKnown RBP24.4■■□□□ 1.5
TRO-225ENST00000622017 WIZO95785 1651 aa24.4■■□□□ 1.5
TRO-225ENST00000622017 RSF1Q96T23 1441 aaPredicted RBP24.39■■□□□ 1.5
TRO-225ENST00000622017 SUPT5HO00267 1087 aaKnown RBP24.38■■□□□ 1.49
TRO-225ENST00000622017 HMGXB3Q12766 1538 aa24.38■■□□□ 1.49
TRO-225ENST00000622017 TOP2AP11388 1531 aaKnown RBP24.1■■□□□ 1.45
TRO-225ENST00000622017 NESP48681 1621 aa23.88■■□□□ 1.41
TRO-225ENST00000622017 LAMC3Q9Y6N6 1575 aa23.86■■□□□ 1.41
TRO-225ENST00000622017 CCDC88BA6NC98 1476 aa23.85■■□□□ 1.41
TRO-225ENST00000622017 CADPSQ9ULU8 1353 aa23.84■■□□□ 1.41
TRO-225ENST00000622017 ERCC6Q03468 1493 aa23.81■■□□□ 1.4
TRO-225ENST00000622017 PDS5BQ9NTI5 1447 aa23.74■■□□□ 1.39
TRO-225ENST00000622017 CFTRP13569 1480 aa23.7■■□□□ 1.38
TRO-225ENST00000622017 KIF21AQ7Z4S6 1674 aa23.63■■□□□ 1.37
TRO-225ENST00000622017 PRDM2Q13029 1718 aa23.59■■□□□ 1.37
TRO-225ENST00000622017 FANCD2Q9BXW9 1451 aa23.57■■□□□ 1.36
TRO-225ENST00000622017 CEP164Q9UPV0 1460 aa23.53■■□□□ 1.36
TRO-225ENST00000622017 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
TRO-225ENST00000622017 THOC2Q8NI27 1593 aaKnown RBP23.42■■□□□ 1.34
TRO-225ENST00000622017 CUX2O14529 1486 aa23.39■■□□□ 1.33
TRO-225ENST00000622017 CHIC1Q5VXU3 224 aa23.34■■□□□ 1.33
TRO-225ENST00000622017 WDR62O43379 1518 aa23.3■■□□□ 1.32
TRO-225ENST00000622017 URB2Q14146 1524 aaKnown RBP23.27■■□□□ 1.32
TRO-225ENST00000622017 ABCC8Q09428 1581 aa23.25■■□□□ 1.31
TRO-225ENST00000622017 TOPBP1Q92547 1522 aa23.19■■□□□ 1.3
TRO-225ENST00000622017 DNMBPQ6XZF7 1577 aa23.18■■□□□ 1.3
TRO-225ENST00000622017 CUX1P39880 1505 aa23.06■■□□□ 1.28
TRO-225ENST00000622017 WRNQ14191 1432 aaPredicted RBP eCLIP23.05■■□□□ 1.28
TRO-225ENST00000622017 IFT140Q96RY7 1462 aa23.02■■□□□ 1.28
TRO-225ENST00000622017 POLA1P09884 1462 aaPredicted RBP22.99■■□□□ 1.27
TRO-225ENST00000622017 FGD5Q6ZNL6 1462 aa22.99■■□□□ 1.27
TRO-225ENST00000622017 SOGA1O94964 1423 aa22.98■■□□□ 1.27
TRO-225ENST00000622017 TRIM41Q8WV44 630 aa22.97■■□□□ 1.27
TRO-225ENST00000622017 TOP2BQ02880 1626 aa22.94■■□□□ 1.26
TRO-225ENST00000622017 RAD54L2Q9Y4B4 1467 aa22.93■■□□□ 1.26
TRO-225ENST00000622017 SYNJ1O43426 1573 aa22.92■■□□□ 1.26
TRO-225ENST00000622017 BIVM-ERCC5R4GMW8 1640 aa22.92■■□□□ 1.26
TRO-225ENST00000622017 TARBP1Q13395 1621 aaKnown RBP22.9■■□□□ 1.26
TRO-225ENST00000622017 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
TRO-225ENST00000622017 AQRO60306 1485 aaKnown RBP eCLIP22.82■■□□□ 1.24
TRO-225ENST00000622017 TDRD9Q8NDG6 1382 aaKnown RBP22.82■■□□□ 1.24
TRO-225ENST00000622017 EIF4G3O43432 1585 aaKnown RBP22.79■■□□□ 1.24
TRO-225ENST00000622017 ABCA10Q8WWZ4 1543 aa22.76■■□□□ 1.23
TRO-225ENST00000622017 WDR97A6NE52 1622 aa22.74■■□□□ 1.23
TRO-225ENST00000622017 GAPVD1Q14C86 1478 aa22.69■■□□□ 1.22
TRO-225ENST00000622017 FBLN2P98095 1184 aa22.65■■□□□ 1.22
TRO-225ENST00000622017 GRIN2BQ13224 1484 aa22.65■■□□□ 1.22
TRO-225ENST00000622017 PBRM1Q86U86 1689 aa22.63■■□□□ 1.21
TRO-225ENST00000622017 ABCA5Q8WWZ7 1642 aa22.62■■□□□ 1.21
TRO-225ENST00000622017 OSCARQ8IYS5 282 aa22.58■■□□□ 1.21
TRO-225ENST00000622017 CHMP7Q8WUX9 453 aaPredicted RBP22.58■■□□□ 1.21
TRO-225ENST00000622017 SNAPC4Q5SXM2 1469 aa22.58■■□□□ 1.2
TRO-225ENST00000622017 KIF27Q86VH2 1401 aa22.58■■□□□ 1.2
TRO-225ENST00000622017 MAGI1Q96QZ7 1491 aaPredicted RBP22.55■■□□□ 1.2
TRO-225ENST00000622017 CHD1O14646 1710 aa22.52■■□□□ 1.2
TRO-225ENST00000622017 DNAJC5Q9H3Z4 198 aa22.5■■□□□ 1.19
TRO-225ENST00000622017 ERICH3Q5RHP9 1530 aa22.5■■□□□ 1.19
TRO-225ENST00000622017 FAM9AQ8IZU1 332 aaPredicted RBP22.49■■□□□ 1.19
TRO-225ENST00000622017 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
TRO-225ENST00000622017 EEA1Q15075 1411 aa22.45■■□□□ 1.18
TRO-225ENST00000622017 FHAD1B1AJZ9 1412 aa22.42■■□□□ 1.18
TRO-225ENST00000622017 IGF1RP08069 1367 aa22.42■■□□□ 1.18
TRO-225ENST00000622017 LOC105371045A0A1W2PR82 267 aa22.41■■□□□ 1.18
TRO-225ENST00000622017 ADAMTS12P58397 1594 aa22.4■■□□□ 1.18
TRO-225ENST00000622017 RUSC2Q8N2Y8 1516 aa22.38■■□□□ 1.17
TRO-225ENST00000622017 CUL7Q14999 1698 aa22.36■■□□□ 1.17
TRO-225ENST00000622017 GRIN2AQ12879 1464 aa22.34■■□□□ 1.17
TRO-225ENST00000622017 CARMIL1Q5VZK9 1371 aa22.33■■□□□ 1.17
TRO-225ENST00000622017 CSRNP3Q8WYN3 585 aa22.32■■□□□ 1.16
TRO-225ENST00000622017 CEP170Q5SW79 1584 aa22.21■■□□□ 1.15
TRO-225ENST00000622017 RAPGEF2Q9Y4G8 1499 aa22.2■■□□□ 1.15
TRO-225ENST00000622017 NUP160Q12769 1436 aa22.19■■□□□ 1.14
TRO-225ENST00000622017 CLASP1Q7Z460 1538 aa22.19■■□□□ 1.14
TRO-225ENST00000622017 EHMT2Q96KQ7 1210 aa22.13■■□□□ 1.13
TRO-225ENST00000622017 KIF21BO75037 1637 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms