RNA–Protein interactions for RNA: ENST00000611159.4

SAMD4B-214, Transcript of sterile alpha motif domain containing 4B, humanhuman

TSL 5 BASIC

Gene SAMD4B, Length 3,662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-214ENST00000611159 NISCHQ9Y2I1 1504 aa21.55■■□□□ 1.04
SAMD4B-214ENST00000611159 CCDC180Q9P1Z9 1646 aa19.03■□□□□ 0.64
SAMD4B-214ENST00000611159 DCAF8L2P0C7V8 631 aa18.74■□□□□ 0.59
SAMD4B-214ENST00000611159 SHROOM4Q9ULL8 1493 aa18.64■□□□□ 0.58
SAMD4B-214ENST00000611159 ABCC9O60706 1549 aa18.49■□□□□ 0.55
SAMD4B-214ENST00000611159 SLC24A1O60721 1099 aa18.44■□□□□ 0.54
SAMD4B-214ENST00000611159 PELP1Q8IZL8 1130 aaKnown RBP18.3■□□□□ 0.52
SAMD4B-214ENST00000611159 SUPT5HO00267 1087 aaKnown RBP18.29■□□□□ 0.52
SAMD4B-214ENST00000611159 MYT1Q01538 1121 aa18.21■□□□□ 0.51
SAMD4B-214ENST00000611159 TTBK1Q5TCY1 1321 aaPredicted RBP18.08■□□□□ 0.49
SAMD4B-214ENST00000611159 PRKCSHP14314 528 aaPredicted RBP18.02■□□□□ 0.47
SAMD4B-214ENST00000611159 APLP2Q06481 763 aa18.01■□□□□ 0.47
SAMD4B-214ENST00000611159 ZCCHC6Q5VYS8 1495 aaKnown RBP17.99■□□□□ 0.47
SAMD4B-214ENST00000611159 NACADO15069 1562 aa17.81■□□□□ 0.44
SAMD4B-214ENST00000611159 RB1CC1Q8TDY2 1594 aa17.8■□□□□ 0.44
SAMD4B-214ENST00000611159 DCAF1Q9Y4B6 1507 aa17.76■□□□□ 0.43
SAMD4B-214ENST00000611159 MYO15BQ96JP2 1530 aa17.73■□□□□ 0.43
SAMD4B-214ENST00000611159 UNC13AQ9UPW8 1703 aa17.57■□□□□ 0.4
SAMD4B-214ENST00000611159 DAXXQ9UER7 740 aaPredicted RBP17.49■□□□□ 0.39
SAMD4B-214ENST00000611159 EHMT2Q96KQ7 1210 aa17.48■□□□□ 0.39
SAMD4B-214ENST00000611159 SCRIBQ14160 1630 aa17.47■□□□□ 0.39
SAMD4B-214ENST00000611159 PABPN1Q86U42 306 aaKnown RBP eCLIP17.34■□□□□ 0.37
SAMD4B-214ENST00000611159 BICRAQ9NZM4 1560 aa17.34■□□□□ 0.37
SAMD4B-214ENST00000611159 ERICH6Q7L0X2 663 aa17.14■□□□□ 0.33
SAMD4B-214ENST00000611159 FAM9AQ8IZU1 332 aaPredicted RBP17.14■□□□□ 0.33
SAMD4B-214ENST00000611159 CHIC1Q5VXU3 224 aa17.05■□□□□ 0.32
SAMD4B-214ENST00000611159 LOC105371045A0A1W2PR82 267 aa17.03■□□□□ 0.32
SAMD4B-214ENST00000611159 PCGF6Q9BYE7 350 aa16.9■□□□□ 0.3
SAMD4B-214ENST00000611159 DNAJC5BQ9UF47 199 aa16.84■□□□□ 0.29
SAMD4B-214ENST00000611159 CECR2Q9BXF3 1484 aa16.83■□□□□ 0.29
SAMD4B-214ENST00000611159 EIF4G1Q04637 1599 aaKnown RBP16.83■□□□□ 0.29
SAMD4B-214ENST00000611159 PPARGC1BQ86YN6 1023 aaKnown RBP16.76■□□□□ 0.27
SAMD4B-214ENST00000611159 CC2D2AQ9P2K1 1620 aa16.73■□□□□ 0.27
SAMD4B-214ENST00000611159 BCL11AQ9H165 835 aa16.71■□□□□ 0.27
SAMD4B-214ENST00000611159 TRIM41Q8WV44 630 aa16.69■□□□□ 0.26
SAMD4B-214ENST00000611159 SMARCA4P51532 1647 aa16.69■□□□□ 0.26
SAMD4B-214ENST00000611159 MROH2BQ7Z745 1585 aa16.66■□□□□ 0.26
SAMD4B-214ENST00000611159 BAZ1AQ9NRL2 1556 aaPredicted RBP16.65■□□□□ 0.26
SAMD4B-214ENST00000611159 WIZO95785 1651 aa16.54■□□□□ 0.24
SAMD4B-214ENST00000611159 ATAD2BQ9ULI0 1458 aa16.52■□□□□ 0.24
SAMD4B-214ENST00000611159 RSF1Q96T23 1441 aaPredicted RBP16.52■□□□□ 0.23
SAMD4B-214ENST00000611159 RANGAP1P46060 587 aaPredicted RBP16.5■□□□□ 0.23
SAMD4B-214ENST00000611159 NCBP3Q53F19 620 aaKnown RBP16.49■□□□□ 0.23
SAMD4B-214ENST00000611159 PEG3Q9GZU2 1588 aa16.48■□□□□ 0.23
SAMD4B-214ENST00000611159 SMARCA2P51531 1590 aa16.47■□□□□ 0.23
SAMD4B-214ENST00000611159 NCAPD3P42695 1498 aa16.45■□□□□ 0.22
SAMD4B-214ENST00000611159 BAZ1BQ9UIG0 1483 aaKnown RBP16.39■□□□□ 0.21
SAMD4B-214ENST00000611159 HMGXB3Q12766 1538 aa16.38■□□□□ 0.21
SAMD4B-214ENST00000611159 TOP2AP11388 1531 aaKnown RBP16.27■□□□□ 0.19
SAMD4B-214ENST00000611159 EIF5BO60841 1220 aaKnown RBP16.25■□□□□ 0.19
SAMD4B-214ENST00000611159 HRCP23327 699 aa16.23■□□□□ 0.19
SAMD4B-214ENST00000611159 SCAF1Q9H7N4 1312 aaKnown RBP16.21■□□□□ 0.19
SAMD4B-214ENST00000611159 UBTFP17480 764 aaKnown RBP16.15■□□□□ 0.18
SAMD4B-214ENST00000611159 CCDC88BA6NC98 1476 aa16.12■□□□□ 0.17
SAMD4B-214ENST00000611159 PLEKHG5O94827 1062 aa16.12■□□□□ 0.17
SAMD4B-214ENST00000611159 NESP48681 1621 aa16.1■□□□□ 0.17
SAMD4B-214ENST00000611159 TRIM26Q12899 539 aaPredicted RBP16.07■□□□□ 0.16
SAMD4B-214ENST00000611159 ARXQ96QS3 562 aa16.07■□□□□ 0.16
SAMD4B-214ENST00000611159 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.99■□□□□ 0.15
SAMD4B-214ENST00000611159 CADPSQ9ULU8 1353 aa15.99■□□□□ 0.15
SAMD4B-214ENST00000611159 LAMC3Q9Y6N6 1575 aa15.99■□□□□ 0.15
SAMD4B-214ENST00000611159 CFTRP13569 1480 aa15.95■□□□□ 0.14
SAMD4B-214ENST00000611159 PLPPR3Q6T4P5 718 aa15.93■□□□□ 0.14
SAMD4B-214ENST00000611159 KIF21AQ7Z4S6 1674 aa15.93■□□□□ 0.14
SAMD4B-214ENST00000611159 PRDM2Q13029 1718 aa15.91■□□□□ 0.14
SAMD4B-214ENST00000611159 UBE2Q2Q8WVN8 375 aa15.9■□□□□ 0.14
SAMD4B-214ENST00000611159 CCER1Q8TC90 406 aaPredicted RBP15.89■□□□□ 0.13
SAMD4B-214ENST00000611159 ERCC6Q03468 1493 aa15.86■□□□□ 0.13
SAMD4B-214ENST00000611159 RTN4Q9NQC3 1192 aaKnown RBP15.84■□□□□ 0.13
SAMD4B-214ENST00000611159 PDS5BQ9NTI5 1447 aa15.84■□□□□ 0.13
SAMD4B-214ENST00000611159 FANCD2Q9BXW9 1451 aa15.83■□□□□ 0.12
SAMD4B-214ENST00000611159 HNRNPUL2Q1KMD3 747 aaKnown RBP15.82■□□□□ 0.12
SAMD4B-214ENST00000611159 ABCC8Q09428 1581 aa15.82■□□□□ 0.12
SAMD4B-214ENST00000611159 KLHL34Q8N239 644 aa15.8■□□□□ 0.12
SAMD4B-214ENST00000611159 TIMELESSQ9UNS1 1208 aa15.79■□□□□ 0.12
SAMD4B-214ENST00000611159 CEP164Q9UPV0 1460 aa15.77■□□□□ 0.11
SAMD4B-214ENST00000611159 ATP1B4Q9UN42 357 aaPredicted RBP15.76■□□□□ 0.11
SAMD4B-214ENST00000611159 THOC2Q8NI27 1593 aaKnown RBP15.76■□□□□ 0.11
SAMD4B-214ENST00000611159 SOGA1O94964 1423 aa15.74■□□□□ 0.11
SAMD4B-214ENST00000611159 CSRNP3Q8WYN3 585 aa15.72■□□□□ 0.11
SAMD4B-214ENST00000611159 ITGAEP38570 1179 aa15.71■□□□□ 0.11
SAMD4B-214ENST00000611159 URB2Q14146 1524 aaKnown RBP15.69■□□□□ 0.1
SAMD4B-214ENST00000611159 MRC2Q9UBG0 1479 aa15.69■□□□□ 0.1
SAMD4B-214ENST00000611159 RUSC2Q8N2Y8 1516 aa15.66■□□□□ 0.1
SAMD4B-214ENST00000611159 WDR62O43379 1518 aa15.65■□□□□ 0.1
SAMD4B-214ENST00000611159 TOPBP1Q92547 1522 aa15.61■□□□□ 0.09
SAMD4B-214ENST00000611159 CUX1P39880 1505 aa15.6■□□□□ 0.09
SAMD4B-214ENST00000611159 DNMBPQ6XZF7 1577 aa15.59■□□□□ 0.09
SAMD4B-214ENST00000611159 P3H3Q8IVL6 736 aa15.58■□□□□ 0.09
SAMD4B-214ENST00000611159 SYNJ1O43426 1573 aa15.56■□□□□ 0.08
SAMD4B-214ENST00000611159 CUX2O14529 1486 aa15.56■□□□□ 0.08
SAMD4B-214ENST00000611159 WRNQ14191 1432 aaPredicted RBP eCLIP15.54■□□□□ 0.08
SAMD4B-214ENST00000611159 YTHDC1Q96MU7 727 aaKnown RBP15.52■□□□□ 0.08
SAMD4B-214ENST00000611159 BIVM-ERCC5R4GMW8 1640 aa15.51■□□□□ 0.07
SAMD4B-214ENST00000611159 TOP2BQ02880 1626 aa15.5■□□□□ 0.07
SAMD4B-214ENST00000611159 POLA1P09884 1462 aaPredicted RBP15.5■□□□□ 0.07
SAMD4B-214ENST00000611159 PODXL2Q9NZ53 605 aa15.5■□□□□ 0.07
SAMD4B-214ENST00000611159 FGD5Q6ZNL6 1462 aa15.5■□□□□ 0.07
SAMD4B-214ENST00000611159 RAD54L2Q9Y4B4 1467 aa15.47■□□□□ 0.07
SAMD4B-214ENST00000611159 CEP162Q5TB80 1403 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms