RNA–Protein interactions for RNA: ENST00000417036.1

THUMPD3-203, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-203ENST00000417036 NISCHQ9Y2I1 1504 aa33.99■■■■□ 3.03
THUMPD3-203ENST00000417036 ABCC9O60706 1549 aa30.9■■■□□ 2.54
THUMPD3-203ENST00000417036 CCDC180Q9P1Z9 1646 aa30.71■■■□□ 2.51
THUMPD3-203ENST00000417036 RB1CC1Q8TDY2 1594 aa29.32■■■□□ 2.28
THUMPD3-203ENST00000417036 DNAJC5BQ9UF47 199 aa29.15■■■□□ 2.26
THUMPD3-203ENST00000417036 NACADO15069 1562 aa29.04■■■□□ 2.24
THUMPD3-203ENST00000417036 DCAF8L2P0C7V8 631 aa28.78■■■□□ 2.2
THUMPD3-203ENST00000417036 UNC13AQ9UPW8 1703 aa28.76■■■□□ 2.19
THUMPD3-203ENST00000417036 PABPN1Q86U42 306 aaKnown RBP eCLIP28.68■■■□□ 2.18
THUMPD3-203ENST00000417036 MYO15BQ96JP2 1530 aa28.52■■■□□ 2.16
THUMPD3-203ENST00000417036 BICRAQ9NZM4 1560 aa28.47■■■□□ 2.15
THUMPD3-203ENST00000417036 ZCCHC6Q5VYS8 1495 aaKnown RBP28.13■■■□□ 2.09
THUMPD3-203ENST00000417036 DCAF1Q9Y4B6 1507 aa28.07■■■□□ 2.08
THUMPD3-203ENST00000417036 SHROOM4Q9ULL8 1493 aa28.05■■■□□ 2.08
THUMPD3-203ENST00000417036 SCRIBQ14160 1630 aa27.95■■■□□ 2.06
THUMPD3-203ENST00000417036 CC2D2AQ9P2K1 1620 aa27.93■■■□□ 2.06
THUMPD3-203ENST00000417036 CECR2Q9BXF3 1484 aa27.86■■■□□ 2.05
THUMPD3-203ENST00000417036 EIF4G1Q04637 1599 aaKnown RBP27.79■■■□□ 2.04
THUMPD3-203ENST00000417036 DNAJC5Q9H3Z4 198 aa26.98■■□□□ 1.91
THUMPD3-203ENST00000417036 NCAPD3P42695 1498 aa26.76■■□□□ 1.87
THUMPD3-203ENST00000417036 CUX2O14529 1486 aa26.74■■□□□ 1.87
THUMPD3-203ENST00000417036 ERCC6Q03468 1493 aa26.72■■□□□ 1.87
THUMPD3-203ENST00000417036 ATAD2BQ9ULI0 1458 aa26.66■■□□□ 1.86
THUMPD3-203ENST00000417036 SMARCA4P51532 1647 aa26.62■■□□□ 1.85
THUMPD3-203ENST00000417036 SMARCA2P51531 1590 aa26.62■■□□□ 1.85
THUMPD3-203ENST00000417036 HMGXB3Q12766 1538 aa26.6■■□□□ 1.85
THUMPD3-203ENST00000417036 NESP48681 1621 aa26.47■■□□□ 1.83
THUMPD3-203ENST00000417036 BAZ1AQ9NRL2 1556 aaPredicted RBP26.43■■□□□ 1.82
THUMPD3-203ENST00000417036 BAZ1BQ9UIG0 1483 aaKnown RBP26.42■■□□□ 1.82
THUMPD3-203ENST00000417036 PEG3Q9GZU2 1588 aa26.34■■□□□ 1.81
THUMPD3-203ENST00000417036 THOC2Q8NI27 1593 aaKnown RBP26.3■■□□□ 1.8
THUMPD3-203ENST00000417036 LAMC3Q9Y6N6 1575 aa26.27■■□□□ 1.8
THUMPD3-203ENST00000417036 KIF21AQ7Z4S6 1674 aa26.21■■□□□ 1.79
THUMPD3-203ENST00000417036 MROH2BQ7Z745 1585 aa26.2■■□□□ 1.78
THUMPD3-203ENST00000417036 PDS5BQ9NTI5 1447 aa26.08■■□□□ 1.77
THUMPD3-203ENST00000417036 CADPSQ9ULU8 1353 aa25.94■■□□□ 1.74
THUMPD3-203ENST00000417036 WIZO95785 1651 aa25.92■■□□□ 1.74
THUMPD3-203ENST00000417036 MRC2Q9UBG0 1479 aa25.9■■□□□ 1.74
THUMPD3-203ENST00000417036 WDR62O43379 1518 aa25.85■■□□□ 1.73
THUMPD3-203ENST00000417036 CEP164Q9UPV0 1460 aa25.75■■□□□ 1.71
THUMPD3-203ENST00000417036 TRIM41Q8WV44 630 aa25.72■■□□□ 1.71
THUMPD3-203ENST00000417036 FANCD2Q9BXW9 1451 aa25.68■■□□□ 1.7
THUMPD3-203ENST00000417036 CFTRP13569 1480 aa25.6■■□□□ 1.69
THUMPD3-203ENST00000417036 TOP2AP11388 1531 aaKnown RBP25.55■■□□□ 1.68
THUMPD3-203ENST00000417036 RSF1Q96T23 1441 aaPredicted RBP25.53■■□□□ 1.68
THUMPD3-203ENST00000417036 URB2Q14146 1524 aaKnown RBP25.49■■□□□ 1.67
THUMPD3-203ENST00000417036 PRDM2Q13029 1718 aa25.49■■□□□ 1.67
THUMPD3-203ENST00000417036 OSCARQ8IYS5 282 aa25.43■■□□□ 1.66
THUMPD3-203ENST00000417036 RIMBP3CA6NJZ7 1639 aa25.23■■□□□ 1.63
THUMPD3-203ENST00000417036 RIMBP3BA6NNM3 1639 aa25.23■■□□□ 1.63
THUMPD3-203ENST00000417036 RIMBP3Q9UFD9 1639 aa25.23■■□□□ 1.63
THUMPD3-203ENST00000417036 CCDC88BA6NC98 1476 aa25.22■■□□□ 1.63
THUMPD3-203ENST00000417036 IFT140Q96RY7 1462 aa25.22■■□□□ 1.63
THUMPD3-203ENST00000417036 ZNF608Q9ULD9 1512 aaPredicted RBP25.21■■□□□ 1.63
THUMPD3-203ENST00000417036 TOPBP1Q92547 1522 aa25.17■■□□□ 1.62
THUMPD3-203ENST00000417036 EIF4G3O43432 1585 aaKnown RBP25.12■■□□□ 1.61
THUMPD3-203ENST00000417036 ABCC8Q09428 1581 aa25.09■■□□□ 1.61
THUMPD3-203ENST00000417036 ARHGEF11O15085 1522 aa25.08■■□□□ 1.61
THUMPD3-203ENST00000417036 DNMBPQ6XZF7 1577 aa25.08■■□□□ 1.61
THUMPD3-203ENST00000417036 CHD1O14646 1710 aa25.03■■□□□ 1.6
THUMPD3-203ENST00000417036 TARBP1Q13395 1621 aaKnown RBP24.99■■□□□ 1.59
THUMPD3-203ENST00000417036 AQRO60306 1485 aaKnown RBP eCLIP24.93■■□□□ 1.58
THUMPD3-203ENST00000417036 POLA1P09884 1462 aaPredicted RBP24.89■■□□□ 1.57
THUMPD3-203ENST00000417036 CYB5RLQ6IPT4 315 aa24.86■■□□□ 1.57
THUMPD3-203ENST00000417036 FBLN2P98095 1184 aa24.82■■□□□ 1.56
THUMPD3-203ENST00000417036 ARAP1Q96P48 1450 aa24.82■■□□□ 1.56
THUMPD3-203ENST00000417036 RAD54L2Q9Y4B4 1467 aa24.79■■□□□ 1.56
THUMPD3-203ENST00000417036 SUPT5HO00267 1087 aaKnown RBP24.75■■□□□ 1.55
THUMPD3-203ENST00000417036 SOGA1O94964 1423 aa24.75■■□□□ 1.55
THUMPD3-203ENST00000417036 TDRD9Q8NDG6 1382 aaKnown RBP24.73■■□□□ 1.55
THUMPD3-203ENST00000417036 WDR97A6NE52 1622 aa24.72■■□□□ 1.55
THUMPD3-203ENST00000417036 SNAPC4Q5SXM2 1469 aa24.7■■□□□ 1.55
THUMPD3-203ENST00000417036 FGD5Q6ZNL6 1462 aa24.7■■□□□ 1.55
THUMPD3-203ENST00000417036 TRHP20396 242 aaPredicted RBP24.69■■□□□ 1.54
THUMPD3-203ENST00000417036 CLASP1Q7Z460 1538 aa24.66■■□□□ 1.54
THUMPD3-203ENST00000417036 CUX1P39880 1505 aa24.64■■□□□ 1.53
THUMPD3-203ENST00000417036 SYNJ1O43426 1573 aa24.63■■□□□ 1.53
THUMPD3-203ENST00000417036 MAGI1Q96QZ7 1491 aaPredicted RBP24.63■■□□□ 1.53
THUMPD3-203ENST00000417036 CHMP7Q8WUX9 453 aaPredicted RBP24.59■■□□□ 1.53
THUMPD3-203ENST00000417036 GRIN2BQ13224 1484 aa24.58■■□□□ 1.53
THUMPD3-203ENST00000417036 PBRM1Q86U86 1689 aa24.57■■□□□ 1.52
THUMPD3-203ENST00000417036 SYNJ2O15056 1496 aa24.53■■□□□ 1.52
THUMPD3-203ENST00000417036 GAPVD1Q14C86 1478 aa24.46■■□□□ 1.51
THUMPD3-203ENST00000417036 ABCA5Q8WWZ7 1642 aa24.43■■□□□ 1.5
THUMPD3-203ENST00000417036 ABCA10Q8WWZ4 1543 aa24.4■■□□□ 1.5
THUMPD3-203ENST00000417036 GRIN2AQ12879 1464 aa24.27■■□□□ 1.48
THUMPD3-203ENST00000417036 ADAMTS12P58397 1594 aa24.27■■□□□ 1.48
THUMPD3-203ENST00000417036 ERCC6L2Q5T890 1561 aa24.25■■□□□ 1.47
THUMPD3-203ENST00000417036 WRNQ14191 1432 aaPredicted RBP eCLIP24.23■■□□□ 1.47
THUMPD3-203ENST00000417036 BIVM-ERCC5R4GMW8 1640 aa24.22■■□□□ 1.47
THUMPD3-203ENST00000417036 CEP170Q5SW79 1584 aa24.22■■□□□ 1.47
THUMPD3-203ENST00000417036 TOP2BQ02880 1626 aa24.2■■□□□ 1.46
THUMPD3-203ENST00000417036 NUP160Q12769 1436 aa24.18■■□□□ 1.46
THUMPD3-203ENST00000417036 AEBP2Q6ZN18 517 aaPredicted RBP24.18■■□□□ 1.46
THUMPD3-203ENST00000417036 SHROOM2Q13796 1616 aa24.17■■□□□ 1.46
THUMPD3-203ENST00000417036 FHAD1B1AJZ9 1412 aa24.13■■□□□ 1.45
THUMPD3-203ENST00000417036 ERICH3Q5RHP9 1530 aa24.1■■□□□ 1.45
THUMPD3-203ENST00000417036 KIF13AQ9H1H9 1805 aa24.05■■□□□ 1.44
THUMPD3-203ENST00000417036 PRG4Q92954 1404 aaPredicted RBP23.97■■□□□ 1.43
THUMPD3-203ENST00000417036 RUSC2Q8N2Y8 1516 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms