RNA–Protein interactions for RNA: ENST00000306388.10

TBCA-201, Transcript of tubulin folding cofactor A, humanhuman

TSL 2 BASIC

Gene TBCA, Length 2,301 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBCA-201ENST00000306388 NISCHQ9Y2I1 1504 aa21.15■□□□□ 0.98
TBCA-201ENST00000306388 CCDC180Q9P1Z9 1646 aa18.36■□□□□ 0.53
TBCA-201ENST00000306388 ZCCHC6Q5VYS8 1495 aaKnown RBP17.8■□□□□ 0.44
TBCA-201ENST00000306388 DCAF1Q9Y4B6 1507 aa17.51■□□□□ 0.39
TBCA-201ENST00000306388 DCAF8L2P0C7V8 631 aa17.33■□□□□ 0.36
TBCA-201ENST00000306388 SHROOM4Q9ULL8 1493 aa17.3■□□□□ 0.36
TBCA-201ENST00000306388 MYO15BQ96JP2 1530 aa17.25■□□□□ 0.35
TBCA-201ENST00000306388 ABCC9O60706 1549 aa17.18■□□□□ 0.34
TBCA-201ENST00000306388 NACADO15069 1562 aa17.06■□□□□ 0.32
TBCA-201ENST00000306388 SCRIBQ14160 1630 aa16.87■□□□□ 0.29
TBCA-201ENST00000306388 RB1CC1Q8TDY2 1594 aa16.86■□□□□ 0.29
TBCA-201ENST00000306388 SUPT5HO00267 1087 aaKnown RBP16.73■□□□□ 0.27
TBCA-201ENST00000306388 UNC13AQ9UPW8 1703 aa16.55■□□□□ 0.24
TBCA-201ENST00000306388 RSF1Q96T23 1441 aaPredicted RBP16.48■□□□□ 0.23
TBCA-201ENST00000306388 CECR2Q9BXF3 1484 aa16.42■□□□□ 0.22
TBCA-201ENST00000306388 BICRAQ9NZM4 1560 aa16.39■□□□□ 0.21
TBCA-201ENST00000306388 MROH2BQ7Z745 1585 aa16.34■□□□□ 0.21
TBCA-201ENST00000306388 BAZ1AQ9NRL2 1556 aaPredicted RBP16.3■□□□□ 0.2
TBCA-201ENST00000306388 PABPN1Q86U42 306 aaKnown RBP eCLIP16.23■□□□□ 0.19
TBCA-201ENST00000306388 SMARCA4P51532 1647 aa16.21■□□□□ 0.19
TBCA-201ENST00000306388 WIZO95785 1651 aa16.2■□□□□ 0.18
TBCA-201ENST00000306388 CHIC1Q5VXU3 224 aa16.16■□□□□ 0.18
TBCA-201ENST00000306388 PEG3Q9GZU2 1588 aa16.04■□□□□ 0.16
TBCA-201ENST00000306388 TOP2AP11388 1531 aaKnown RBP16.04■□□□□ 0.16
TBCA-201ENST00000306388 ATAD2BQ9ULI0 1458 aa15.91■□□□□ 0.14
TBCA-201ENST00000306388 SMARCA2P51531 1590 aa15.91■□□□□ 0.14
TBCA-201ENST00000306388 CCDC88BA6NC98 1476 aa15.89■□□□□ 0.13
TBCA-201ENST00000306388 EIF4G1Q04637 1599 aaKnown RBP15.87■□□□□ 0.13
TBCA-201ENST00000306388 BAZ1BQ9UIG0 1483 aaKnown RBP15.8■□□□□ 0.12
TBCA-201ENST00000306388 NCAPD3P42695 1498 aa15.77■□□□□ 0.11
TBCA-201ENST00000306388 HMGXB3Q12766 1538 aa15.74■□□□□ 0.11
TBCA-201ENST00000306388 TRIM41Q8WV44 630 aa15.73■□□□□ 0.11
TBCA-201ENST00000306388 ABCC8Q09428 1581 aa15.59■□□□□ 0.09
TBCA-201ENST00000306388 CC2D2AQ9P2K1 1620 aa15.57■□□□□ 0.08
TBCA-201ENST00000306388 LOC105371045A0A1W2PR82 267 aa15.53■□□□□ 0.08
TBCA-201ENST00000306388 WRNQ14191 1432 aaPredicted RBP eCLIP15.48■□□□□ 0.07
TBCA-201ENST00000306388 CFTRP13569 1480 aa15.45■□□□□ 0.06
TBCA-201ENST00000306388 FAM9AQ8IZU1 332 aaPredicted RBP15.42■□□□□ 0.06
TBCA-201ENST00000306388 SYNJ1O43426 1573 aa15.41■□□□□ 0.06
TBCA-201ENST00000306388 PRDM2Q13029 1718 aa15.37■□□□□ 0.05
TBCA-201ENST00000306388 CADPSQ9ULU8 1353 aa15.36■□□□□ 0.05
TBCA-201ENST00000306388 EEA1Q15075 1411 aa15.35■□□□□ 0.05
TBCA-201ENST00000306388 TOP2BQ02880 1626 aa15.35■□□□□ 0.05
TBCA-201ENST00000306388 SOGA1O94964 1423 aa15.34■□□□□ 0.05
TBCA-201ENST00000306388 BIVM-ERCC5R4GMW8 1640 aa15.33■□□□□ 0.04
TBCA-201ENST00000306388 RUSC2Q8N2Y8 1516 aa15.29■□□□□ 0.04
TBCA-201ENST00000306388 CUX1P39880 1505 aa15.27■□□□□ 0.03
TBCA-201ENST00000306388 CSRNP3Q8WYN3 585 aa15.25■□□□□ 0.03
TBCA-201ENST00000306388 LAMC3Q9Y6N6 1575 aa15.18■□□□□ 0.02
TBCA-201ENST00000306388 FANCD2Q9BXW9 1451 aa15.17■□□□□ 0.02
TBCA-201ENST00000306388 EHMT2Q96KQ7 1210 aa15.16■□□□□ 0.02
TBCA-201ENST00000306388 DNAJC5BQ9UF47 199 aa15.16■□□□□ 0.02
TBCA-201ENST00000306388 NESP48681 1621 aa15.15■□□□□ 0.02
TBCA-201ENST00000306388 KIF21BO75037 1637 aa15.15■□□□□ 0.02
TBCA-201ENST00000306388 TNIKQ9UKE5 1360 aa15.14■□□□□ 0.01
TBCA-201ENST00000306388 GOLGA3Q08378 1498 aa15.13■□□□□ 0.01
TBCA-201ENST00000306388 CEP164Q9UPV0 1460 aa15.12■□□□□ 0.01
TBCA-201ENST00000306388 KIF27Q86VH2 1401 aa15.07■□□□□ 0
TBCA-201ENST00000306388 DNMBPQ6XZF7 1577 aa15.07■□□□□ 0
TBCA-201ENST00000306388 FGD5Q6ZNL6 1462 aa15.06■□□□□ 0
TBCA-201ENST00000306388 CEP162Q5TB80 1403 aa15.05■□□□□ -0
TBCA-201ENST00000306388 PRXQ9BXM0 1461 aa15.05■□□□□ -0
TBCA-201ENST00000306388 PDS5BQ9NTI5 1447 aa15.04■□□□□ -0
TBCA-201ENST00000306388 TOPBP1Q92547 1522 aa15.03■□□□□ -0
TBCA-201ENST00000306388 UBTFP17480 764 aaKnown RBP15.03■□□□□ -0
TBCA-201ENST00000306388 RAPGEF2Q9Y4G8 1499 aa15.02■□□□□ -0
TBCA-201ENST00000306388 ERICH3Q5RHP9 1530 aa15.02■□□□□ -0
TBCA-201ENST00000306388 URB2Q14146 1524 aaKnown RBP14.99□□□□□ -0.01
TBCA-201ENST00000306388 CUX2O14529 1486 aa14.98□□□□□ -0.01
TBCA-201ENST00000306388 POLA1P09884 1462 aaPredicted RBP14.97□□□□□ -0.01
TBCA-201ENST00000306388 KIF21AQ7Z4S6 1674 aa14.96□□□□□ -0.01
TBCA-201ENST00000306388 PCGF6Q9BYE7 350 aa14.96□□□□□ -0.01
TBCA-201ENST00000306388 ABCA10Q8WWZ4 1543 aa14.96□□□□□ -0.02
TBCA-201ENST00000306388 IGF1RP08069 1367 aa14.96□□□□□ -0.02
TBCA-201ENST00000306388 TRIM26Q12899 539 aaPredicted RBP14.94□□□□□ -0.02
TBCA-201ENST00000306388 RAD54L2Q9Y4B4 1467 aa14.91□□□□□ -0.02
TBCA-201ENST00000306388 CLIP1P30622 1438 aa14.89□□□□□ -0.03
TBCA-201ENST00000306388 WDR97A6NE52 1622 aa14.88□□□□□ -0.03
TBCA-201ENST00000306388 CARMIL1Q5VZK9 1371 aa14.85□□□□□ -0.03
TBCA-201ENST00000306388 MRC2Q9UBG0 1479 aa14.84□□□□□ -0.03
TBCA-201ENST00000306388 TARBP1Q13395 1621 aaKnown RBP14.81□□□□□ -0.04
TBCA-201ENST00000306388 ABCA5Q8WWZ7 1642 aa14.81□□□□□ -0.04
TBCA-201ENST00000306388 VPS8Q8N3P4 1428 aa14.79□□□□□ -0.04
TBCA-201ENST00000306388 CUL7Q14999 1698 aa14.79□□□□□ -0.04
TBCA-201ENST00000306388 WDR62O43379 1518 aa14.77□□□□□ -0.05
TBCA-201ENST00000306388 TDRD9Q8NDG6 1382 aaKnown RBP14.76□□□□□ -0.05
TBCA-201ENST00000306388 GAPVD1Q14C86 1478 aa14.76□□□□□ -0.05
TBCA-201ENST00000306388 ARAP1Q96P48 1450 aa14.74□□□□□ -0.05
TBCA-201ENST00000306388 PPARGC1BQ86YN6 1023 aaKnown RBP14.74□□□□□ -0.05
TBCA-201ENST00000306388 ARHGAP35Q9NRY4 1499 aa14.71□□□□□ -0.05
TBCA-201ENST00000306388 HRCP23327 699 aa14.7□□□□□ -0.06
TBCA-201ENST00000306388 IFT140Q96RY7 1462 aa14.69□□□□□ -0.06
TBCA-201ENST00000306388 RANGAP1P46060 587 aaPredicted RBP14.69□□□□□ -0.06
TBCA-201ENST00000306388 ERCC6Q03468 1493 aa14.69□□□□□ -0.06
TBCA-201ENST00000306388 THOC2Q8NI27 1593 aaKnown RBP14.69□□□□□ -0.06
TBCA-201ENST00000306388 PBRM1Q86U86 1689 aa14.65□□□□□ -0.06
TBCA-201ENST00000306388 CTTNBP2Q8WZ74 1663 aa14.64□□□□□ -0.07
TBCA-201ENST00000306388 AQRO60306 1485 aaKnown RBP eCLIP14.64□□□□□ -0.072e-6■■□□□ 13.5
TBCA-201ENST00000306388 GRIN2BQ13224 1484 aa14.62□□□□□ -0.07
TBCA-201ENST00000306388 ZNF608Q9ULD9 1512 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms