RNA–Protein interactions for RNA: ENST00000345094.7

THUMPD3-201, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene THUMPD3, Length 3,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-201ENST00000345094 NISCHQ9Y2I1 1504 aa19.22■□□□□ 0.67
THUMPD3-201ENST00000345094 SUPT5HO00267 1087 aaKnown RBP18.32■□□□□ 0.52
THUMPD3-201ENST00000345094 SHROOM4Q9ULL8 1493 aa18.26■□□□□ 0.51
THUMPD3-201ENST00000345094 DCAF8L2P0C7V8 631 aa18.18■□□□□ 0.5
THUMPD3-201ENST00000345094 PCGF6Q9BYE7 350 aa17.71■□□□□ 0.42
THUMPD3-201ENST00000345094 EHMT2Q96KQ7 1210 aa17.52■□□□□ 0.39
THUMPD3-201ENST00000345094 PPARGC1BQ86YN6 1023 aaKnown RBP17.36■□□□□ 0.37
THUMPD3-201ENST00000345094 HRCP23327 699 aa17.31■□□□□ 0.36
THUMPD3-201ENST00000345094 FAM9AQ8IZU1 332 aaPredicted RBP17.17■□□□□ 0.34
THUMPD3-201ENST00000345094 LOC105371045A0A1W2PR82 267 aa17.13■□□□□ 0.33
THUMPD3-201ENST00000345094 CHIC1Q5VXU3 224 aa17.12■□□□□ 0.33
THUMPD3-201ENST00000345094 TTBK1Q5TCY1 1321 aaPredicted RBP16.96■□□□□ 0.31
THUMPD3-201ENST00000345094 TRIM26Q12899 539 aaPredicted RBP16.77■□□□□ 0.28
THUMPD3-201ENST00000345094 TRIM41Q8WV44 630 aa16.74■□□□□ 0.27
THUMPD3-201ENST00000345094 MYO15BQ96JP2 1530 aa16.65■□□□□ 0.26
THUMPD3-201ENST00000345094 CCER1Q8TC90 406 aaPredicted RBP16.63■□□□□ 0.25
THUMPD3-201ENST00000345094 ZEB1P37275 1124 aaPredicted RBP16.62■□□□□ 0.25
THUMPD3-201ENST00000345094 PELP1Q8IZL8 1130 aaKnown RBP16.53■□□□□ 0.24
THUMPD3-201ENST00000345094 YTHDC1Q96MU7 727 aaKnown RBP16.52■□□□□ 0.24
THUMPD3-201ENST00000345094 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.47■□□□□ 0.23
THUMPD3-201ENST00000345094 CENPBP07199 599 aaPredicted RBP16.41■□□□□ 0.22
THUMPD3-201ENST00000345094 RANGAP1P46060 587 aaPredicted RBP16.38■□□□□ 0.21
THUMPD3-201ENST00000345094 SCAF1Q9H7N4 1312 aaKnown RBP16.28■□□□□ 0.2
THUMPD3-201ENST00000345094 GTF3C3Q9Y5Q9 886 aa16.23■□□□□ 0.19
THUMPD3-201ENST00000345094 UBTFP17480 764 aaKnown RBP16.21■□□□□ 0.19
THUMPD3-201ENST00000345094 DIEXFQ68CQ4 756 aaKnown RBP16.21■□□□□ 0.19
THUMPD3-201ENST00000345094 DCAF1Q9Y4B6 1507 aa16.15■□□□□ 0.18
THUMPD3-201ENST00000345094 APLP2Q06481 763 aa16.12■□□□□ 0.17
THUMPD3-201ENST00000345094 ZCCHC6Q5VYS8 1495 aaKnown RBP16.12■□□□□ 0.17
THUMPD3-201ENST00000345094 HNRNPUL2Q1KMD3 747 aaKnown RBP16.1■□□□□ 0.17
THUMPD3-201ENST00000345094 NEUROD1Q13562 356 aa16.09■□□□□ 0.17
THUMPD3-201ENST00000345094 ACIN1Q9UKV3 1341 aaKnown RBP16.09■□□□□ 0.17
THUMPD3-201ENST00000345094 ITGAEP38570 1179 aa15.84■□□□□ 0.13
THUMPD3-201ENST00000345094 MYT1Q01538 1121 aa15.83■□□□□ 0.12
THUMPD3-201ENST00000345094 ZNF316A6NFI3 1004 aaPredicted RBP15.79■□□□□ 0.12
THUMPD3-201ENST00000345094 CCDC180Q9P1Z9 1646 aa15.74■□□□□ 0.11
THUMPD3-201ENST00000345094 ATP1B4Q9UN42 357 aaPredicted RBP15.72■□□□□ 0.11
THUMPD3-201ENST00000345094 BCANQ96GW7 911 aa15.71■□□□□ 0.11
THUMPD3-201ENST00000345094 MIER1Q8N108 512 aa15.68■□□□□ 0.1
THUMPD3-201ENST00000345094 SCRIBQ14160 1630 aa15.64■□□□□ 0.09
THUMPD3-201ENST00000345094 RSF1Q96T23 1441 aaPredicted RBP15.61■□□□□ 0.09
THUMPD3-201ENST00000345094 ABCC9O60706 1549 aa15.59■□□□□ 0.09
THUMPD3-201ENST00000345094 NEFLP07196 543 aa15.55■□□□□ 0.08
THUMPD3-201ENST00000345094 CSRNP3Q8WYN3 585 aa15.54■□□□□ 0.08
THUMPD3-201ENST00000345094 ERICH6Q7L0X2 663 aa15.52■□□□□ 0.07
THUMPD3-201ENST00000345094 PABPN1Q86U42 306 aaKnown RBP eCLIP15.49■□□□□ 0.07
THUMPD3-201ENST00000345094 CNGB1Q14028 1251 aaPredicted RBP15.44■□□□□ 0.06
THUMPD3-201ENST00000345094 RB1CC1Q8TDY2 1594 aa15.4■□□□□ 0.06
THUMPD3-201ENST00000345094 CEP162Q5TB80 1403 aa15.34■□□□□ 0.05
THUMPD3-201ENST00000345094 CECR2Q9BXF3 1484 aa15.34■□□□□ 0.05
THUMPD3-201ENST00000345094 FAM50AQ14320 339 aaKnown RBP15.32■□□□□ 0.04
THUMPD3-201ENST00000345094 FKBP8Q14318 412 aa15.31■□□□□ 0.04
THUMPD3-201ENST00000345094 HIRIP3Q9BW71 556 aaPredicted RBP15.31■□□□□ 0.04
THUMPD3-201ENST00000345094 DDX10Q13206 875 aaKnown RBP15.27■□□□□ 0.04
THUMPD3-201ENST00000345094 TRIM52Q96A61 297 aa15.25■□□□□ 0.03
THUMPD3-201ENST00000345094 SOGA1O94964 1423 aa15.23■□□□□ 0.03
THUMPD3-201ENST00000345094 POLR3GLQ9BT43 218 aa15.22■□□□□ 0.03
THUMPD3-201ENST00000345094 SUPT16HQ9Y5B9 1047 aaKnown RBP15.2■□□□□ 0.02
THUMPD3-201ENST00000345094 P3H3Q8IVL6 736 aa15.2■□□□□ 0.02
THUMPD3-201ENST00000345094 IRX6P78412 446 aaPredicted RBP15.15■□□□□ 0.02
THUMPD3-201ENST00000345094 ABCC8Q09428 1581 aa15.15■□□□□ 0.02
THUMPD3-201ENST00000345094 CCDC88BA6NC98 1476 aa15.14■□□□□ 0.01
THUMPD3-201ENST00000345094 MROH2BQ7Z745 1585 aa15.14■□□□□ 0.01
THUMPD3-201ENST00000345094 ANP32CO43423 234 aa15.13■□□□□ 0.01
THUMPD3-201ENST00000345094 CLIP1P30622 1438 aa15.13■□□□□ 0.01
THUMPD3-201ENST00000345094 TNIKQ9UKE5 1360 aa15.11■□□□□ 0.01
THUMPD3-201ENST00000345094 KCNH8Q96L42 1107 aa15.09■□□□□ 0.01
THUMPD3-201ENST00000345094 ANP32EQ9BTT0 268 aa15.05■□□□□ 0
THUMPD3-201ENST00000345094 RUSC2Q8N2Y8 1516 aa15.03■□□□□ -0
THUMPD3-201ENST00000345094 HNRNPUQ00839 825 aaKnown RBP eCLIP15.01□□□□□ -0.01
THUMPD3-201ENST00000345094 TSHZ2Q9NRE2 1034 aa15.01□□□□□ -0.01
THUMPD3-201ENST00000345094 CDK11AQ9UQ88 783 aaPredicted RBP15.01□□□□□ -0.01
THUMPD3-201ENST00000345094 GOLGA3Q08378 1498 aa15.01□□□□□ -0.01
THUMPD3-201ENST00000345094 SIN3AQ96ST3 1273 aa15.01□□□□□ -0.01
THUMPD3-201ENST00000345094 WIZO95785 1651 aa15.01□□□□□ -0.01
THUMPD3-201ENST00000345094 SENP3-EIF4A1A0A087X0R7 540 aa14.99□□□□□ -0.01
THUMPD3-201ENST00000345094 KANK4Q5T7N3 995 aaPredicted RBP14.97□□□□□ -0.01
THUMPD3-201ENST00000345094 CLSPNQ9HAW4 1339 aa14.95□□□□□ -0.02
THUMPD3-201ENST00000345094 ARID3CA6NKF2 412 aa14.95□□□□□ -0.02
THUMPD3-201ENST00000345094 WRNQ14191 1432 aaPredicted RBP eCLIP14.94□□□□□ -0.02
THUMPD3-201ENST00000345094 FAM9BQ8IZU0 186 aa14.92□□□□□ -0.02
THUMPD3-201ENST00000345094 BCL11AQ9H165 835 aa14.91□□□□□ -0.02
THUMPD3-201ENST00000345094 ZNF326Q5BKZ1 582 aaKnown RBP14.9□□□□□ -0.02
THUMPD3-201ENST00000345094 NBR1Q14596 966 aa14.88□□□□□ -0.03
THUMPD3-201ENST00000345094 EEA1Q15075 1411 aa14.87□□□□□ -0.03
THUMPD3-201ENST00000345094 RBM19Q9Y4C8 960 aaKnown RBP14.86□□□□□ -0.03
THUMPD3-201ENST00000345094 CEP164Q9UPV0 1460 aa14.84□□□□□ -0.03
THUMPD3-201ENST00000345094 TONSLQ96HA7 1378 aa14.84□□□□□ -0.03
THUMPD3-201ENST00000345094 CHIC2Q9UKJ5 165 aa14.83□□□□□ -0.04
THUMPD3-201ENST00000345094 RTL5Q5HYW3 569 aaPredicted RBP14.83□□□□□ -0.04
THUMPD3-201ENST00000345094 VPS8Q8N3P4 1428 aa14.81□□□□□ -0.04
THUMPD3-201ENST00000345094 NPM2Q86SE8 214 aaKnown RBP14.81□□□□□ -0.04
THUMPD3-201ENST00000345094 BAZ1AQ9NRL2 1556 aaPredicted RBP14.79□□□□□ -0.04
THUMPD3-201ENST00000345094 SALL2Q9Y467 1007 aaPredicted RBP14.77□□□□□ -0.04
THUMPD3-201ENST00000345094 DHX57Q6P158 1386 aaKnown RBP14.77□□□□□ -0.05
THUMPD3-201ENST00000345094 CCNB3Q8WWL7 1395 aa14.73□□□□□ -0.05
THUMPD3-201ENST00000345094 RAPGEF2Q9Y4G8 1499 aa14.73□□□□□ -0.05
THUMPD3-201ENST00000345094 MRS2Q9HD23 443 aa14.72□□□□□ -0.05
THUMPD3-201ENST00000345094 B4GALNT3Q6L9W6 998 aa14.72□□□□□ -0.05
THUMPD3-201ENST00000345094 NACADO15069 1562 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms