RNA–Protein interactions for RNA: ENST00000535982.1

CELF1-218, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 4

Gene CELF1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-218ENST00000535982 DNAJC5BQ9UF47 199 aa13.98□□□□□ -0.17
CELF1-218ENST00000535982 DNAJC5Q9H3Z4 198 aa13.77□□□□□ -0.21
CELF1-218ENST00000535982 ABCC9O60706 1549 aa13.52□□□□□ -0.25
CELF1-218ENST00000535982 NISCHQ9Y2I1 1504 aa13.48□□□□□ -0.25
CELF1-218ENST00000535982 TRIM41Q8WV44 630 aa12.71□□□□□ -0.37
CELF1-218ENST00000535982 PELP1Q8IZL8 1130 aaKnown RBP12.53□□□□□ -0.4
CELF1-218ENST00000535982 PABPN1Q86U42 306 aaKnown RBP eCLIP12.4□□□□□ -0.42
CELF1-218ENST00000535982 HRCP23327 699 aa12.39□□□□□ -0.43
CELF1-218ENST00000535982 AEBP2Q6ZN18 517 aaPredicted RBP12.3□□□□□ -0.44
CELF1-218ENST00000535982 CECR2Q9BXF3 1484 aa12.27□□□□□ -0.44
CELF1-218ENST00000535982 MYT1Q01538 1121 aa12.24□□□□□ -0.45
CELF1-218ENST00000535982 ILDR1Q86SU0 546 aaPredicted RBP12.15□□□□□ -0.46
CELF1-218ENST00000535982 RB1CC1Q8TDY2 1594 aa12.11□□□□□ -0.47
CELF1-218ENST00000535982 CUX2O14529 1486 aa12.1□□□□□ -0.47
CELF1-218ENST00000535982 CC2D2AQ9P2K1 1620 aa12.08□□□□□ -0.48
CELF1-218ENST00000535982 DCAF1Q9Y4B6 1507 aa11.96□□□□□ -0.49
CELF1-218ENST00000535982 CCDC180Q9P1Z9 1646 aa11.96□□□□□ -0.5
CELF1-218ENST00000535982 UNC13AQ9UPW8 1703 aa11.89□□□□□ -0.51
CELF1-218ENST00000535982 BICRAQ9NZM4 1560 aa11.88□□□□□ -0.51
CELF1-218ENST00000535982 MYO15BQ96JP2 1530 aa11.82□□□□□ -0.52
CELF1-218ENST00000535982 ZEB1P37275 1124 aaPredicted RBP11.8□□□□□ -0.52
CELF1-218ENST00000535982 PCGF6Q9BYE7 350 aa11.77□□□□□ -0.53
CELF1-218ENST00000535982 PPARGC1BQ86YN6 1023 aaKnown RBP11.73□□□□□ -0.53
CELF1-218ENST00000535982 ERCC6Q03468 1493 aa11.72□□□□□ -0.53
CELF1-218ENST00000535982 CHIC1Q5VXU3 224 aa11.7□□□□□ -0.54
CELF1-218ENST00000535982 EIF4G1Q04637 1599 aaKnown RBP11.68□□□□□ -0.54
CELF1-218ENST00000535982 NACADO15069 1562 aa11.66□□□□□ -0.54
CELF1-218ENST00000535982 SCAF1Q9H7N4 1312 aaKnown RBP11.65□□□□□ -0.54
CELF1-218ENST00000535982 TTBK1Q5TCY1 1321 aaPredicted RBP11.63□□□□□ -0.55
CELF1-218ENST00000535982 TRIM26Q12899 539 aaPredicted RBP11.63□□□□□ -0.55
CELF1-218ENST00000535982 TRHP20396 242 aaPredicted RBP11.62□□□□□ -0.55
CELF1-218ENST00000535982 ZCCHC6Q5VYS8 1495 aaKnown RBP11.57□□□□□ -0.56
CELF1-218ENST00000535982 SUPT5HO00267 1087 aaKnown RBP11.54□□□□□ -0.56
CELF1-218ENST00000535982 DCAF8L2P0C7V8 631 aa11.5□□□□□ -0.57
CELF1-218ENST00000535982 SHROOM4Q9ULL8 1493 aa11.48□□□□□ -0.57
CELF1-218ENST00000535982 ACIN1Q9UKV3 1341 aaKnown RBP11.46□□□□□ -0.57
CELF1-218ENST00000535982 RIMBP3CA6NJZ7 1639 aa11.4□□□□□ -0.58
CELF1-218ENST00000535982 RIMBP3BA6NNM3 1639 aa11.4□□□□□ -0.58
CELF1-218ENST00000535982 RIMBP3Q9UFD9 1639 aa11.4□□□□□ -0.58
CELF1-218ENST00000535982 LMTK3Q96Q04 1460 aa11.37□□□□□ -0.59
CELF1-218ENST00000535982 CENPBP07199 599 aaPredicted RBP11.36□□□□□ -0.59
CELF1-218ENST00000535982 OSCARQ8IYS5 282 aa11.35□□□□□ -0.59
CELF1-218ENST00000535982 SOCS7O14512 581 aa11.34□□□□□ -0.59
CELF1-218ENST00000535982 THOC2Q8NI27 1593 aaKnown RBP11.31□□□□□ -0.6
CELF1-218ENST00000535982 BAZ1AQ9NRL2 1556 aaPredicted RBP11.3□□□□□ -0.6
CELF1-218ENST00000535982 CYB5RLQ6IPT4 315 aa11.27□□□□□ -0.61
CELF1-218ENST00000535982 ILDR2Q71H61 639 aa11.26□□□□□ -0.61
CELF1-218ENST00000535982 NEUROD1Q13562 356 aa11.25□□□□□ -0.61
CELF1-218ENST00000535982 NESP48681 1621 aa11.22□□□□□ -0.61
CELF1-218ENST00000535982 GTF3C3Q9Y5Q9 886 aa11.22□□□□□ -0.61
CELF1-218ENST00000535982 ARHGEF11O15085 1522 aa11.21□□□□□ -0.61
CELF1-218ENST00000535982 CLSPNQ9HAW4 1339 aa11.18□□□□□ -0.62
CELF1-218ENST00000535982 LOC105371045A0A1W2PR82 267 aa11.17□□□□□ -0.62
CELF1-218ENST00000535982 FBXO41Q8TF61 875 aa11.15□□□□□ -0.62
CELF1-218ENST00000535982 SMARCA2P51531 1590 aa11.15□□□□□ -0.62
CELF1-218ENST00000535982 DIEXFQ68CQ4 756 aaKnown RBP11.08□□□□□ -0.64
CELF1-218ENST00000535982 SCRIBQ14160 1630 aa11.03□□□□□ -0.64
CELF1-218ENST00000535982 KDM4FA0A1W2PPD8 638 aa11.03□□□□□ -0.64
CELF1-218ENST00000535982 ARAP1Q96P48 1450 aa11.02□□□□□ -0.65
CELF1-218ENST00000535982 DISP3Q9P2K9 1392 aa11.02□□□□□ -0.65
CELF1-218ENST00000535982 ERCC6L2Q5T890 1561 aa10.99□□□□□ -0.65
CELF1-218ENST00000535982 KIF21AQ7Z4S6 1674 aa10.97□□□□□ -0.65
CELF1-218ENST00000535982 BCL11AQ9H165 835 aa10.95□□□□□ -0.66
CELF1-218ENST00000535982 ANP32EQ9BTT0 268 aa10.94□□□□□ -0.66
CELF1-218ENST00000535982 WRNQ14191 1432 aaPredicted RBP eCLIP10.93□□□□□ -0.66
CELF1-218ENST00000535982 CCER1Q8TC90 406 aaPredicted RBP10.93□□□□□ -0.66
CELF1-218ENST00000535982 ZNF316A6NFI3 1004 aaPredicted RBP10.92□□□□□ -0.66
CELF1-218ENST00000535982 HECW2Q9P2P5 1572 aa10.89□□□□□ -0.67
CELF1-218ENST00000535982 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.82□□□□□ -0.68
CELF1-218ENST00000535982 RSF1Q96T23 1441 aaPredicted RBP10.81□□□□□ -0.68
CELF1-218ENST00000535982 WDR62O43379 1518 aa10.8□□□□□ -0.68
CELF1-218ENST00000535982 NCAPD3P42695 1498 aa10.8□□□□□ -0.68
CELF1-218ENST00000535982 MRC2Q9UBG0 1479 aa10.8□□□□□ -0.68
CELF1-218ENST00000535982 FAM9AQ8IZU1 332 aaPredicted RBP10.78□□□□□ -0.68
CELF1-218ENST00000535982 PDS5BQ9NTI5 1447 aa10.77□□□□□ -0.68
CELF1-218ENST00000535982 LAMC3Q9Y6N6 1575 aa10.77□□□□□ -0.69
CELF1-218ENST00000535982 SYNJ2O15056 1496 aa10.74□□□□□ -0.69
CELF1-218ENST00000535982 ERICH6Q7L0X2 663 aa10.73□□□□□ -0.69
CELF1-218ENST00000535982 TSHZ2Q9NRE2 1034 aa10.73□□□□□ -0.69
CELF1-218ENST00000535982 SUPT16HQ9Y5B9 1047 aaKnown RBP10.73□□□□□ -0.69
CELF1-218ENST00000535982 SPATA31D1Q6ZQQ2 1576 aa10.7□□□□□ -0.7
CELF1-218ENST00000535982 MIER1Q8N108 512 aa10.7□□□□□ -0.7
CELF1-218ENST00000535982 MYT1LQ9UL68 1186 aa10.69□□□□□ -0.7
CELF1-218ENST00000535982 CSRNP3Q8WYN3 585 aa10.66□□□□□ -0.7
CELF1-218ENST00000535982 YTHDC1Q96MU7 727 aaKnown RBP10.65□□□□□ -0.7
CELF1-218ENST00000535982 PRKCSHP14314 528 aaPredicted RBP10.64□□□□□ -0.71
CELF1-218ENST00000535982 EEA1Q15075 1411 aa10.64□□□□□ -0.71
CELF1-218ENST00000535982 TNIKQ9UKE5 1360 aa10.64□□□□□ -0.71
CELF1-218ENST00000535982 ATAD2BQ9ULI0 1458 aa10.61□□□□□ -0.71
CELF1-218ENST00000535982 CEP162Q5TB80 1403 aa10.6□□□□□ -0.71
CELF1-218ENST00000535982 HMGXB3Q12766 1538 aa10.58□□□□□ -0.72
CELF1-218ENST00000535982 ADGRL1O94910 1474 aa10.57□□□□□ -0.72
CELF1-218ENST00000535982 APLP2Q06481 763 aa10.55□□□□□ -0.72
CELF1-218ENST00000535982 CHD1O14646 1710 aa10.53□□□□□ -0.72
CELF1-218ENST00000535982 ZNF608Q9ULD9 1512 aaPredicted RBP10.51□□□□□ -0.73
CELF1-218ENST00000535982 KIF13AQ9H1H9 1805 aa10.5□□□□□ -0.73
CELF1-218ENST00000535982 FANCIQ9NVI1 1328 aa10.5□□□□□ -0.73
CELF1-218ENST00000535982 FBLN2P98095 1184 aa10.48□□□□□ -0.73
CELF1-218ENST00000535982 GOLGA3Q08378 1498 aa10.48□□□□□ -0.73
CELF1-218ENST00000535982 CEP164Q9UPV0 1460 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms