RNA–Protein interactions for RNA: ENST00000554023.1

SLC39A9-204, Transcript of solute carrier family 39 member 9, humanhuman

TSL 2

Gene SLC39A9, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A9-204ENST00000554023 NISCHQ9Y2I1 1504 aa29.03■■■□□ 2.24
SLC39A9-204ENST00000554023 CCDC180Q9P1Z9 1646 aa25.84■■□□□ 1.73
SLC39A9-204ENST00000554023 ABCC9O60706 1549 aa25.03■■□□□ 1.6
SLC39A9-204ENST00000554023 NACADO15069 1562 aa24.25■■□□□ 1.47
SLC39A9-204ENST00000554023 MYO15BQ96JP2 1530 aa24.23■■□□□ 1.47
SLC39A9-204ENST00000554023 RB1CC1Q8TDY2 1594 aa24.22■■□□□ 1.47
SLC39A9-204ENST00000554023 ZCCHC6Q5VYS8 1495 aaKnown RBP24.22■■□□□ 1.47
SLC39A9-204ENST00000554023 DCAF1Q9Y4B6 1507 aa24.12■■□□□ 1.45
SLC39A9-204ENST00000554023 DCAF8L2P0C7V8 631 aa23.99■■□□□ 1.43
SLC39A9-204ENST00000554023 UNC13AQ9UPW8 1703 aa23.65■■□□□ 1.38
SLC39A9-204ENST00000554023 BICRAQ9NZM4 1560 aa23.48■■□□□ 1.35
SLC39A9-204ENST00000554023 SCRIBQ14160 1630 aa23.44■■□□□ 1.34
SLC39A9-204ENST00000554023 SHROOM4Q9ULL8 1493 aa23.38■■□□□ 1.33
SLC39A9-204ENST00000554023 PABPN1Q86U42 306 aaKnown RBP eCLIP23.35■■□□□ 1.33
SLC39A9-204ENST00000554023 DNAJC5BQ9UF47 199 aa22.88■■□□□ 1.25
SLC39A9-204ENST00000554023 EIF4G1Q04637 1599 aaKnown RBP22.84■■□□□ 1.25
SLC39A9-204ENST00000554023 CC2D2AQ9P2K1 1620 aa22.71■■□□□ 1.23
SLC39A9-204ENST00000554023 CECR2Q9BXF3 1484 aa22.54■■□□□ 1.2
SLC39A9-204ENST00000554023 BAZ1AQ9NRL2 1556 aaPredicted RBP22.51■■□□□ 1.19
SLC39A9-204ENST00000554023 SMARCA4P51532 1647 aa22.5■■□□□ 1.19
SLC39A9-204ENST00000554023 NCAPD3P42695 1498 aa22.37■■□□□ 1.17
SLC39A9-204ENST00000554023 SMARCA2P51531 1590 aa22.37■■□□□ 1.17
SLC39A9-204ENST00000554023 PEG3Q9GZU2 1588 aa22.37■■□□□ 1.17
SLC39A9-204ENST00000554023 ATAD2BQ9ULI0 1458 aa22.35■■□□□ 1.17
SLC39A9-204ENST00000554023 MROH2BQ7Z745 1585 aa22.33■■□□□ 1.16
SLC39A9-204ENST00000554023 HMGXB3Q12766 1538 aa22.29■■□□□ 1.16
SLC39A9-204ENST00000554023 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
SLC39A9-204ENST00000554023 RSF1Q96T23 1441 aaPredicted RBP22.12■■□□□ 1.13
SLC39A9-204ENST00000554023 WIZO95785 1651 aa22.07■■□□□ 1.12
SLC39A9-204ENST00000554023 TOP2AP11388 1531 aaKnown RBP21.91■■□□□ 1.1
SLC39A9-204ENST00000554023 LAMC3Q9Y6N6 1575 aa21.76■■□□□ 1.07
SLC39A9-204ENST00000554023 NESP48681 1621 aa21.69■■□□□ 1.06
SLC39A9-204ENST00000554023 CADPSQ9ULU8 1353 aa21.68■■□□□ 1.06
SLC39A9-204ENST00000554023 CCDC88BA6NC98 1476 aa21.6■■□□□ 1.05
SLC39A9-204ENST00000554023 CFTRP13569 1480 aa21.6■■□□□ 1.05
SLC39A9-204ENST00000554023 ERCC6Q03468 1493 aa21.58■■□□□ 1.05
SLC39A9-204ENST00000554023 PDS5BQ9NTI5 1447 aa21.58■■□□□ 1.05
SLC39A9-204ENST00000554023 KIF21AQ7Z4S6 1674 aa21.47■■□□□ 1.03
SLC39A9-204ENST00000554023 PRDM2Q13029 1718 aa21.46■■□□□ 1.03
SLC39A9-204ENST00000554023 SUPT5HO00267 1087 aaKnown RBP21.45■■□□□ 1.02
SLC39A9-204ENST00000554023 THOC2Q8NI27 1593 aaKnown RBP21.44■■□□□ 1.02
SLC39A9-204ENST00000554023 CUX2O14529 1486 aa21.43■■□□□ 1.02
SLC39A9-204ENST00000554023 FANCD2Q9BXW9 1451 aa21.41■■□□□ 1.02
SLC39A9-204ENST00000554023 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.01
SLC39A9-204ENST00000554023 MRC2Q9UBG0 1479 aa21.35■■□□□ 1.01
SLC39A9-204ENST00000554023 WDR62O43379 1518 aa21.31■■□□□ 1
SLC39A9-204ENST00000554023 URB2Q14146 1524 aaKnown RBP21.19■□□□□ 0.98
SLC39A9-204ENST00000554023 ABCC8Q09428 1581 aa21.16■□□□□ 0.98
SLC39A9-204ENST00000554023 DNMBPQ6XZF7 1577 aa21.1■□□□□ 0.97
SLC39A9-204ENST00000554023 TOPBP1Q92547 1522 aa21.09■□□□□ 0.97
SLC39A9-204ENST00000554023 IFT140Q96RY7 1462 aa20.96■□□□□ 0.95
SLC39A9-204ENST00000554023 CUX1P39880 1505 aa20.94■□□□□ 0.94
SLC39A9-204ENST00000554023 POLA1P09884 1462 aaPredicted RBP20.92■□□□□ 0.94
SLC39A9-204ENST00000554023 TARBP1Q13395 1621 aaKnown RBP20.87■□□□□ 0.93
SLC39A9-204ENST00000554023 FGD5Q6ZNL6 1462 aa20.86■□□□□ 0.93
SLC39A9-204ENST00000554023 WRNQ14191 1432 aaPredicted RBP eCLIP20.85■□□□□ 0.93
SLC39A9-204ENST00000554023 BIVM-ERCC5R4GMW8 1640 aa20.84■□□□□ 0.93
SLC39A9-204ENST00000554023 TOP2BQ02880 1626 aa20.83■□□□□ 0.93
SLC39A9-204ENST00000554023 WDR97A6NE52 1622 aa20.81■□□□□ 0.92
SLC39A9-204ENST00000554023 SOGA1O94964 1423 aa20.8■□□□□ 0.92
SLC39A9-204ENST00000554023 ZNF608Q9ULD9 1512 aaPredicted RBP20.79■□□□□ 0.92
SLC39A9-204ENST00000554023 SYNJ1O43426 1573 aa20.78■□□□□ 0.92
SLC39A9-204ENST00000554023 RAD54L2Q9Y4B4 1467 aa20.76■□□□□ 0.91
SLC39A9-204ENST00000554023 EIF4G3O43432 1585 aaKnown RBP20.76■□□□□ 0.91
SLC39A9-204ENST00000554023 ABCA10Q8WWZ4 1543 aa20.72■□□□□ 0.91
SLC39A9-204ENST00000554023 AQRO60306 1485 aaKnown RBP eCLIP20.67■□□□□ 0.9
SLC39A9-204ENST00000554023 TDRD9Q8NDG6 1382 aaKnown RBP20.63■□□□□ 0.89
SLC39A9-204ENST00000554023 ABCA5Q8WWZ7 1642 aa20.62■□□□□ 0.89
SLC39A9-204ENST00000554023 DNAJC5Q9H3Z4 198 aa20.61■□□□□ 0.89
SLC39A9-204ENST00000554023 GRIN2BQ13224 1484 aa20.59■□□□□ 0.89
SLC39A9-204ENST00000554023 GAPVD1Q14C86 1478 aa20.58■□□□□ 0.89
SLC39A9-204ENST00000554023 MAGI1Q96QZ7 1491 aaPredicted RBP20.56■□□□□ 0.88
SLC39A9-204ENST00000554023 PBRM1Q86U86 1689 aa20.54■□□□□ 0.88
SLC39A9-204ENST00000554023 SNAPC4Q5SXM2 1469 aa20.5■□□□□ 0.87
SLC39A9-204ENST00000554023 ERICH3Q5RHP9 1530 aa20.48■□□□□ 0.87
SLC39A9-204ENST00000554023 OSCARQ8IYS5 282 aa20.48■□□□□ 0.87
SLC39A9-204ENST00000554023 SYNJ2O15056 1496 aa20.46■□□□□ 0.87
SLC39A9-204ENST00000554023 CHD1O14646 1710 aa20.46■□□□□ 0.87
SLC39A9-204ENST00000554023 KIF27Q86VH2 1401 aa20.42■□□□□ 0.86
SLC39A9-204ENST00000554023 ADAMTS12P58397 1594 aa20.41■□□□□ 0.86
SLC39A9-204ENST00000554023 FHAD1B1AJZ9 1412 aa20.37■□□□□ 0.85
SLC39A9-204ENST00000554023 CHMP7Q8WUX9 453 aaPredicted RBP20.35■□□□□ 0.85
SLC39A9-204ENST00000554023 TRIM41Q8WV44 630 aa20.33■□□□□ 0.85
SLC39A9-204ENST00000554023 GRIN2AQ12879 1464 aa20.32■□□□□ 0.84
SLC39A9-204ENST00000554023 FBLN2P98095 1184 aa20.32■□□□□ 0.84
SLC39A9-204ENST00000554023 CUL7Q14999 1698 aa20.31■□□□□ 0.84
SLC39A9-204ENST00000554023 IGF1RP08069 1367 aa20.31■□□□□ 0.84
SLC39A9-204ENST00000554023 CLASP1Q7Z460 1538 aa20.29■□□□□ 0.84
SLC39A9-204ENST00000554023 NUP160Q12769 1436 aa20.27■□□□□ 0.83
SLC39A9-204ENST00000554023 CEP170Q5SW79 1584 aa20.2■□□□□ 0.82
SLC39A9-204ENST00000554023 CARMIL1Q5VZK9 1371 aa20.18■□□□□ 0.82
SLC39A9-204ENST00000554023 RUSC2Q8N2Y8 1516 aa20.17■□□□□ 0.82
SLC39A9-204ENST00000554023 ARHGEF11O15085 1522 aa20.17■□□□□ 0.82
SLC39A9-204ENST00000554023 CHIC1Q5VXU3 224 aa20.16■□□□□ 0.82
SLC39A9-204ENST00000554023 RIMBP3CA6NJZ7 1639 aa20.15■□□□□ 0.82
SLC39A9-204ENST00000554023 RIMBP3BA6NNM3 1639 aa20.15■□□□□ 0.82
SLC39A9-204ENST00000554023 RIMBP3Q9UFD9 1639 aa20.15■□□□□ 0.82
SLC39A9-204ENST00000554023 EEA1Q15075 1411 aa20.14■□□□□ 0.81
SLC39A9-204ENST00000554023 SHROOM2Q13796 1616 aa20.11■□□□□ 0.81
SLC39A9-204ENST00000554023 RAPGEF2Q9Y4G8 1499 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms