RNA–Protein interactions for RNA: ENST00000342628.6

FOXM1-201, Transcript of forkhead box M1, humanhuman

TSL 1 (best) BASIC

Gene FOXM1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXM1-201ENST00000342628 NISCHQ9Y2I1 1504 aa19.1■□□□□ 0.65
FOXM1-201ENST00000342628 CCDC180Q9P1Z9 1646 aa16.84■□□□□ 0.29
FOXM1-201ENST00000342628 ABCC9O60706 1549 aa16.22■□□□□ 0.19
FOXM1-201ENST00000342628 DCAF8L2P0C7V8 631 aa15.98■□□□□ 0.15
FOXM1-201ENST00000342628 ZCCHC6Q5VYS8 1495 aaKnown RBP15.96■□□□□ 0.15
FOXM1-201ENST00000342628 DCAF1Q9Y4B6 1507 aa15.8■□□□□ 0.12
FOXM1-201ENST00000342628 NACADO15069 1562 aa15.78■□□□□ 0.12
FOXM1-201ENST00000342628 MYO15BQ96JP2 1530 aa15.75■□□□□ 0.11
FOXM1-201ENST00000342628 RB1CC1Q8TDY2 1594 aa15.74■□□□□ 0.11
FOXM1-201ENST00000342628 SCRIBQ14160 1630 aa15.42■□□□□ 0.06
FOXM1-201ENST00000342628 SHROOM4Q9ULL8 1493 aa15.35■□□□□ 0.05
FOXM1-201ENST00000342628 UNC13AQ9UPW8 1703 aa15.33■□□□□ 0.04
FOXM1-201ENST00000342628 PABPN1Q86U42 306 aaKnown RBP eCLIP15.23■□□□□ 0.03
FOXM1-201ENST00000342628 BICRAQ9NZM4 1560 aa15.17■□□□□ 0.02
FOXM1-201ENST00000342628 CECR2Q9BXF3 1484 aa14.83□□□□□ -0.03
FOXM1-201ENST00000342628 BAZ1AQ9NRL2 1556 aaPredicted RBP14.81□□□□□ -0.04
FOXM1-201ENST00000342628 EIF4G1Q04637 1599 aaKnown RBP14.79□□□□□ -0.04
FOXM1-201ENST00000342628 SMARCA4P51532 1647 aa14.75□□□□□ -0.05
FOXM1-201ENST00000342628 MROH2BQ7Z745 1585 aa14.72□□□□□ -0.05
FOXM1-201ENST00000342628 RSF1Q96T23 1441 aaPredicted RBP14.67□□□□□ -0.06
FOXM1-201ENST00000342628 CC2D2AQ9P2K1 1620 aa14.66□□□□□ -0.06
FOXM1-201ENST00000342628 SUPT5HO00267 1087 aaKnown RBP14.65□□□□□ -0.06
FOXM1-201ENST00000342628 SMARCA2P51531 1590 aa14.63□□□□□ -0.07
FOXM1-201ENST00000342628 ATAD2BQ9ULI0 1458 aa14.6□□□□□ -0.07
FOXM1-201ENST00000342628 WIZO95785 1651 aa14.58□□□□□ -0.07
FOXM1-201ENST00000342628 PEG3Q9GZU2 1588 aa14.57□□□□□ -0.08
FOXM1-201ENST00000342628 DNAJC5BQ9UF47 199 aa14.55□□□□□ -0.08
FOXM1-201ENST00000342628 NCAPD3P42695 1498 aa14.54□□□□□ -0.08
FOXM1-201ENST00000342628 BAZ1BQ9UIG0 1483 aaKnown RBP14.54□□□□□ -0.08
FOXM1-201ENST00000342628 HMGXB3Q12766 1538 aa14.49□□□□□ -0.09
FOXM1-201ENST00000342628 TOP2AP11388 1531 aaKnown RBP14.45□□□□□ -0.1
FOXM1-201ENST00000342628 CCDC88BA6NC98 1476 aa14.29□□□□□ -0.12
FOXM1-201ENST00000342628 CADPSQ9ULU8 1353 aa14.16□□□□□ -0.14
FOXM1-201ENST00000342628 LAMC3Q9Y6N6 1575 aa14.13□□□□□ -0.15
FOXM1-201ENST00000342628 CFTRP13569 1480 aa14.11□□□□□ -0.15
FOXM1-201ENST00000342628 NESP48681 1621 aa14.09□□□□□ -0.15
FOXM1-201ENST00000342628 PDS5BQ9NTI5 1447 aa14.06□□□□□ -0.16
FOXM1-201ENST00000342628 PRDM2Q13029 1718 aa14.04□□□□□ -0.16
FOXM1-201ENST00000342628 ERCC6Q03468 1493 aa14□□□□□ -0.17
FOXM1-201ENST00000342628 FANCD2Q9BXW9 1451 aa14□□□□□ -0.17
FOXM1-201ENST00000342628 CEP164Q9UPV0 1460 aa13.96□□□□□ -0.17
FOXM1-201ENST00000342628 KIF21AQ7Z4S6 1674 aa13.94□□□□□ -0.18
FOXM1-201ENST00000342628 WRNQ14191 1432 aaPredicted RBP eCLIP13.87□□□□□ -0.19
FOXM1-201ENST00000342628 MRC2Q9UBG0 1479 aa13.86□□□□□ -0.19
FOXM1-201ENST00000342628 ABCC8Q09428 1581 aa13.86□□□□□ -0.19
FOXM1-201ENST00000342628 TRIM41Q8WV44 630 aa13.83□□□□□ -0.2
FOXM1-201ENST00000342628 DNMBPQ6XZF7 1577 aa13.81□□□□□ -0.2
FOXM1-201ENST00000342628 CHIC1Q5VXU3 224 aa13.81□□□□□ -0.2
FOXM1-201ENST00000342628 URB2Q14146 1524 aaKnown RBP13.8□□□□□ -0.2
FOXM1-201ENST00000342628 TOPBP1Q92547 1522 aa13.79□□□□□ -0.2
FOXM1-201ENST00000342628 CUX1P39880 1505 aa13.79□□□□□ -0.2
FOXM1-201ENST00000342628 THOC2Q8NI27 1593 aaKnown RBP13.78□□□□□ -0.2
FOXM1-201ENST00000342628 WDR62O43379 1518 aa13.77□□□□□ -0.21
FOXM1-201ENST00000342628 TOP2BQ02880 1626 aa13.77□□□□□ -0.21
FOXM1-201ENST00000342628 SYNJ1O43426 1573 aa13.76□□□□□ -0.21
FOXM1-201ENST00000342628 BIVM-ERCC5R4GMW8 1640 aa13.75□□□□□ -0.21
FOXM1-201ENST00000342628 FGD5Q6ZNL6 1462 aa13.72□□□□□ -0.21
FOXM1-201ENST00000342628 POLA1P09884 1462 aaPredicted RBP13.69□□□□□ -0.22
FOXM1-201ENST00000342628 SOGA1O94964 1423 aa13.69□□□□□ -0.22
FOXM1-201ENST00000342628 CUX2O14529 1486 aa13.68□□□□□ -0.22
FOXM1-201ENST00000342628 IFT140Q96RY7 1462 aa13.65□□□□□ -0.22
FOXM1-201ENST00000342628 RAD54L2Q9Y4B4 1467 aa13.64□□□□□ -0.23
FOXM1-201ENST00000342628 ABCA10Q8WWZ4 1543 aa13.59□□□□□ -0.23
FOXM1-201ENST00000342628 TARBP1Q13395 1621 aaKnown RBP13.59□□□□□ -0.23
FOXM1-201ENST00000342628 KIF27Q86VH2 1401 aa13.57□□□□□ -0.24
FOXM1-201ENST00000342628 TDRD9Q8NDG6 1382 aaKnown RBP13.56□□□□□ -0.24
FOXM1-201ENST00000342628 WDR97A6NE52 1622 aa13.54□□□□□ -0.24
FOXM1-201ENST00000342628 FAM9AQ8IZU1 332 aaPredicted RBP13.54□□□□□ -0.24
FOXM1-201ENST00000342628 EEA1Q15075 1411 aa13.53□□□□□ -0.24
FOXM1-201ENST00000342628 ZNF608Q9ULD9 1512 aaPredicted RBP13.53□□□□□ -0.24
FOXM1-201ENST00000342628 GAPVD1Q14C86 1478 aa13.52□□□□□ -0.24
FOXM1-201ENST00000342628 AQRO60306 1485 aaKnown RBP eCLIP13.52□□□□□ -0.254e-7■■■■■ 32.4
FOXM1-201ENST00000342628 EIF4G3O43432 1585 aaKnown RBP13.49□□□□□ -0.25
FOXM1-201ENST00000342628 ABCA5Q8WWZ7 1642 aa13.48□□□□□ -0.25
FOXM1-201ENST00000342628 RUSC2Q8N2Y8 1516 aa13.48□□□□□ -0.25
FOXM1-201ENST00000342628 CSRNP3Q8WYN3 585 aa13.48□□□□□ -0.25
FOXM1-201ENST00000342628 GRIN2BQ13224 1484 aa13.48□□□□□ -0.25
FOXM1-201ENST00000342628 PBRM1Q86U86 1689 aa13.45□□□□□ -0.26
FOXM1-201ENST00000342628 ERICH3Q5RHP9 1530 aa13.45□□□□□ -0.26
FOXM1-201ENST00000342628 IGF1RP08069 1367 aa13.44□□□□□ -0.26
FOXM1-201ENST00000342628 SNAPC4Q5SXM2 1469 aa13.4□□□□□ -0.26
FOXM1-201ENST00000342628 CARMIL1Q5VZK9 1371 aa13.4□□□□□ -0.26
FOXM1-201ENST00000342628 MAGI1Q96QZ7 1491 aaPredicted RBP13.4□□□□□ -0.26
FOXM1-201ENST00000342628 CUL7Q14999 1698 aa13.4□□□□□ -0.26
FOXM1-201ENST00000342628 FBLN2P98095 1184 aa13.39□□□□□ -0.27
FOXM1-201ENST00000342628 CHMP7Q8WUX9 453 aaPredicted RBP13.39□□□□□ -0.27
FOXM1-201ENST00000342628 FHAD1B1AJZ9 1412 aa13.38□□□□□ -0.27
FOXM1-201ENST00000342628 ADAMTS12P58397 1594 aa13.35□□□□□ -0.27
FOXM1-201ENST00000342628 EHMT2Q96KQ7 1210 aa13.35□□□□□ -0.27
FOXM1-201ENST00000342628 RAPGEF2Q9Y4G8 1499 aa13.35□□□□□ -0.27
FOXM1-201ENST00000342628 SYNJ2O15056 1496 aa13.34□□□□□ -0.27
FOXM1-201ENST00000342628 PRXQ9BXM0 1461 aa13.33□□□□□ -0.27
FOXM1-201ENST00000342628 UBTFP17480 764 aaKnown RBP13.32□□□□□ -0.28
FOXM1-201ENST00000342628 KIF21BO75037 1637 aa13.31□□□□□ -0.28
FOXM1-201ENST00000342628 GOLGA3Q08378 1498 aa13.3□□□□□ -0.28
FOXM1-201ENST00000342628 GRIN2AQ12879 1464 aa13.29□□□□□ -0.28
FOXM1-201ENST00000342628 CHD1O14646 1710 aa13.27□□□□□ -0.28
FOXM1-201ENST00000342628 LOC105371045A0A1W2PR82 267 aa13.25□□□□□ -0.29
FOXM1-201ENST00000342628 OSCARQ8IYS5 282 aa13.23□□□□□ -0.29
FOXM1-201ENST00000342628 AEBP2Q6ZN18 517 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms