RNA–Protein interactions for RNA: ENST00000273038.7

VGLL4-201, Transcript of vestigial like family member 4, humanhuman

TSL 1 (best) BASIC

Gene VGLL4, Length 3,725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL4-201ENST00000273038 NISCHQ9Y2I1 1504 aa22.45■■□□□ 1.18
VGLL4-201ENST00000273038 DCAF8L2P0C7V8 631 aa21.62■■□□□ 1.05
VGLL4-201ENST00000273038 SHROOM4Q9ULL8 1493 aa20.72■□□□□ 0.91
VGLL4-201ENST00000273038 SUPT5HO00267 1087 aaKnown RBP20.39■□□□□ 0.86
VGLL4-201ENST00000273038 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
VGLL4-201ENST00000273038 ABCC9O60706 1549 aa19.45■□□□□ 0.7
VGLL4-201ENST00000273038 PCGF6Q9BYE7 350 aa19.29■□□□□ 0.68
VGLL4-201ENST00000273038 FAM9AQ8IZU1 332 aaPredicted RBP19.17■□□□□ 0.66
VGLL4-201ENST00000273038 PABPN1Q86U42 306 aaKnown RBP eCLIP19.07■□□□□ 0.64
VGLL4-201ENST00000273038 PPARGC1BQ86YN6 1023 aaKnown RBP18.96■□□□□ 0.63
VGLL4-201ENST00000273038 TTBK1Q5TCY1 1321 aaPredicted RBP18.75■□□□□ 0.59
VGLL4-201ENST00000273038 RANGAP1P46060 587 aaPredicted RBP18.74■□□□□ 0.59
VGLL4-201ENST00000273038 HRCP23327 699 aa18.74■□□□□ 0.59
VGLL4-201ENST00000273038 TRIM41Q8WV44 630 aa18.68■□□□□ 0.58
VGLL4-201ENST00000273038 ZCCHC6Q5VYS8 1495 aaKnown RBP18.63■□□□□ 0.57
VGLL4-201ENST00000273038 CCDC180Q9P1Z9 1646 aa18.55■□□□□ 0.56
VGLL4-201ENST00000273038 SCRIBQ14160 1630 aa18.54■□□□□ 0.56
VGLL4-201ENST00000273038 LOC105371045A0A1W2PR82 267 aa18.52■□□□□ 0.56
VGLL4-201ENST00000273038 CHIC1Q5VXU3 224 aa18.49■□□□□ 0.55
VGLL4-201ENST00000273038 UBTFP17480 764 aaKnown RBP18.26■□□□□ 0.51
VGLL4-201ENST00000273038 YTHDC1Q96MU7 727 aaKnown RBP18.18■□□□□ 0.5
VGLL4-201ENST00000273038 ATP1B4Q9UN42 357 aaPredicted RBP18.13■□□□□ 0.49
VGLL4-201ENST00000273038 PELP1Q8IZL8 1130 aaKnown RBP18.1■□□□□ 0.49
VGLL4-201ENST00000273038 CCER1Q8TC90 406 aaPredicted RBP18.09■□□□□ 0.49
VGLL4-201ENST00000273038 TRIM26Q12899 539 aaPredicted RBP18.07■□□□□ 0.48
VGLL4-201ENST00000273038 APLP2Q06481 763 aa18■□□□□ 0.47
VGLL4-201ENST00000273038 CECR2Q9BXF3 1484 aa17.97■□□□□ 0.47
VGLL4-201ENST00000273038 ZEB1P37275 1124 aaPredicted RBP17.93■□□□□ 0.46
VGLL4-201ENST00000273038 CENPBP07199 599 aaPredicted RBP17.92■□□□□ 0.46
VGLL4-201ENST00000273038 RB1CC1Q8TDY2 1594 aa17.91■□□□□ 0.46
VGLL4-201ENST00000273038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.88■□□□□ 0.45
VGLL4-201ENST00000273038 RSF1Q96T23 1441 aaPredicted RBP17.87■□□□□ 0.45
VGLL4-201ENST00000273038 NACADO15069 1562 aa17.82■□□□□ 0.44
VGLL4-201ENST00000273038 GTF3C3Q9Y5Q9 886 aa17.75■□□□□ 0.43
VGLL4-201ENST00000273038 SCAF1Q9H7N4 1312 aaKnown RBP17.74■□□□□ 0.43
VGLL4-201ENST00000273038 MYO15BQ96JP2 1530 aa17.72■□□□□ 0.43
VGLL4-201ENST00000273038 ITGAEP38570 1179 aa17.71■□□□□ 0.43
VGLL4-201ENST00000273038 DCAF1Q9Y4B6 1507 aa17.66■□□□□ 0.42
VGLL4-201ENST00000273038 MROH2BQ7Z745 1585 aa17.63■□□□□ 0.41
VGLL4-201ENST00000273038 DIEXFQ68CQ4 756 aaKnown RBP17.61■□□□□ 0.41
VGLL4-201ENST00000273038 P3H3Q8IVL6 736 aa17.6■□□□□ 0.41
VGLL4-201ENST00000273038 FBLN2P98095 1184 aa17.59■□□□□ 0.41
VGLL4-201ENST00000273038 HNRNPUL2Q1KMD3 747 aaKnown RBP17.58■□□□□ 0.41
VGLL4-201ENST00000273038 ARID3CA6NKF2 412 aa17.56■□□□□ 0.4
VGLL4-201ENST00000273038 NEUROD1Q13562 356 aa17.53■□□□□ 0.4
VGLL4-201ENST00000273038 CSRNP3Q8WYN3 585 aa17.5■□□□□ 0.39
VGLL4-201ENST00000273038 ACIN1Q9UKV3 1341 aaKnown RBP17.48■□□□□ 0.39
VGLL4-201ENST00000273038 WIZO95785 1651 aa17.42■□□□□ 0.38
VGLL4-201ENST00000273038 BAZ1BQ9UIG0 1483 aaKnown RBP17.4■□□□□ 0.38
VGLL4-201ENST00000273038 BAZ1AQ9NRL2 1556 aaPredicted RBP17.37■□□□□ 0.37
VGLL4-201ENST00000273038 MYT1Q01538 1121 aa17.36■□□□□ 0.37
VGLL4-201ENST00000273038 BCANQ96GW7 911 aa17.29■□□□□ 0.36
VGLL4-201ENST00000273038 ABCC8Q09428 1581 aa17.27■□□□□ 0.36
VGLL4-201ENST00000273038 CCDC88BA6NC98 1476 aa17.27■□□□□ 0.35
VGLL4-201ENST00000273038 FAM50AQ14320 339 aaKnown RBP17.21■□□□□ 0.35
VGLL4-201ENST00000273038 DNAJC5BQ9UF47 199 aa17.19■□□□□ 0.34
VGLL4-201ENST00000273038 WRNQ14191 1432 aaPredicted RBP eCLIP17.19■□□□□ 0.34
VGLL4-201ENST00000273038 SOGA1O94964 1423 aa17.18■□□□□ 0.34
VGLL4-201ENST00000273038 ERICH6Q7L0X2 663 aa17.16■□□□□ 0.34
VGLL4-201ENST00000273038 MYT1LQ9UL68 1186 aa17.13■□□□□ 0.33
VGLL4-201ENST00000273038 ATAD2BQ9ULI0 1458 aa17.09■□□□□ 0.33
VGLL4-201ENST00000273038 SMARCA4P51532 1647 aa17.07■□□□□ 0.32
VGLL4-201ENST00000273038 ZNF316A6NFI3 1004 aaPredicted RBP17.06■□□□□ 0.32
VGLL4-201ENST00000273038 CNGB1Q14028 1251 aaPredicted RBP17.03■□□□□ 0.32
VGLL4-201ENST00000273038 NEFLP07196 543 aa17.03■□□□□ 0.32
VGLL4-201ENST00000273038 MIER1Q8N108 512 aa17■□□□□ 0.31
VGLL4-201ENST00000273038 RUSC2Q8N2Y8 1516 aa16.98■□□□□ 0.31
VGLL4-201ENST00000273038 TOP2AP11388 1531 aaKnown RBP16.95■□□□□ 0.3
VGLL4-201ENST00000273038 ZNF777Q9ULD5 760 aaPredicted RBP16.94■□□□□ 0.3
VGLL4-201ENST00000273038 CHMP7Q8WUX9 453 aaPredicted RBP16.93■□□□□ 0.3
VGLL4-201ENST00000273038 TDRD9Q8NDG6 1382 aaKnown RBP16.92■□□□□ 0.3
VGLL4-201ENST00000273038 SMARCA2P51531 1590 aa16.92■□□□□ 0.3
VGLL4-201ENST00000273038 CEP162Q5TB80 1403 aa16.91■□□□□ 0.3
VGLL4-201ENST00000273038 CLIP1P30622 1438 aa16.89■□□□□ 0.29
VGLL4-201ENST00000273038 ERCC6Q03468 1493 aa16.88■□□□□ 0.29
VGLL4-201ENST00000273038 POLR3GLQ9BT43 218 aa16.88■□□□□ 0.29
VGLL4-201ENST00000273038 BICRAQ9NZM4 1560 aa16.88■□□□□ 0.29
VGLL4-201ENST00000273038 TRIM52Q96A61 297 aa16.87■□□□□ 0.29
VGLL4-201ENST00000273038 CUX2O14529 1486 aa16.86■□□□□ 0.29
VGLL4-201ENST00000273038 EIF4G1Q04637 1599 aaKnown RBP16.85■□□□□ 0.29
VGLL4-201ENST00000273038 CHIC2Q9UKJ5 165 aa16.84■□□□□ 0.29
VGLL4-201ENST00000273038 CADPSQ9ULU8 1353 aa16.82■□□□□ 0.28
VGLL4-201ENST00000273038 KIF27Q86VH2 1401 aa16.81■□□□□ 0.28
VGLL4-201ENST00000273038 NESP48681 1621 aa16.78■□□□□ 0.28
VGLL4-201ENST00000273038 GOLGA3Q08378 1498 aa16.77■□□□□ 0.27
VGLL4-201ENST00000273038 UNC13AQ9UPW8 1703 aa16.75■□□□□ 0.27
VGLL4-201ENST00000273038 ZNF326Q5BKZ1 582 aaKnown RBP16.73■□□□□ 0.27
VGLL4-201ENST00000273038 CARMIL1Q5VZK9 1371 aa16.72■□□□□ 0.27
VGLL4-201ENST00000273038 FKBP8Q14318 412 aa16.72■□□□□ 0.27
VGLL4-201ENST00000273038 KCNH8Q96L42 1107 aa16.7■□□□□ 0.26
VGLL4-201ENST00000273038 TNIKQ9UKE5 1360 aa16.69■□□□□ 0.26
VGLL4-201ENST00000273038 KANK4Q5T7N3 995 aaPredicted RBP16.68■□□□□ 0.26
VGLL4-201ENST00000273038 HIRIP3Q9BW71 556 aaPredicted RBP16.67■□□□□ 0.26
VGLL4-201ENST00000273038 CEP164Q9UPV0 1460 aa16.66■□□□□ 0.26
VGLL4-201ENST00000273038 RAPGEF2Q9Y4G8 1499 aa16.66■□□□□ 0.26
VGLL4-201ENST00000273038 CC2D2AQ9P2K1 1620 aa16.65■□□□□ 0.26
VGLL4-201ENST00000273038 FANCD2Q9BXW9 1451 aa16.65■□□□□ 0.26
VGLL4-201ENST00000273038 RAD54L2Q9Y4B4 1467 aa16.64■□□□□ 0.25
VGLL4-201ENST00000273038 EEA1Q15075 1411 aa16.64■□□□□ 0.25
VGLL4-201ENST00000273038 NCAPD3P42695 1498 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms