Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 SGSH-204ENST00000571051 538 ntTSL 417.76■□□□□ 0.439e-6■■□□□ 13.2
XRN2Q9H0D6 GADD45B-206ENST00000592937 2007 ntTSL 217.69■□□□□ 0.429e-6■■□□□ 13.2
XRN2Q9H0D6 BSCL2-225ENST00000532818 662 ntTSL 217.67■□□□□ 0.429e-6■■□□□ 13.2
XRN2Q9H0D6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.429e-6■■□□□ 13.2
XRN2Q9H0D6 KHSRP-204ENST00000595112 745 ntTSL 317.58■□□□□ 0.49e-6■■□□□ 13.2
XRN2Q9H0D6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.57■□□□□ 0.49e-6■■□□□ 13.2
XRN2Q9H0D6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.399e-6■■□□□ 13.2
XRN2Q9H0D6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.379e-6■■□□□ 13.2
XRN2Q9H0D6 NUP62-215ENST00000599186 466 ntTSL 517.32■□□□□ 0.369e-6■■□□□ 13.2
XRN2Q9H0D6 NUP62-214ENST00000598301 565 ntTSL 417.32■□□□□ 0.369e-6■■□□□ 13.2
XRN2Q9H0D6 GADD45B-202ENST00000585359 750 ntTSL 317.3■□□□□ 0.369e-6■■□□□ 13.2
XRN2Q9H0D6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.349e-6■■□□□ 13.2
XRN2Q9H0D6 TMEM63B-206ENST00000525873 807 ntTSL 217.16■□□□□ 0.349e-6■■□□□ 13.2
XRN2Q9H0D6 FAM76B-208ENST00000540054 730 ntTSL 217.16■□□□□ 0.349e-6■■□□□ 13.2
XRN2Q9H0D6 DMKN-230ENST00000469960 772 ntTSL 217.1■□□□□ 0.339e-6■■□□□ 13.2
XRN2Q9H0D6 TSNARE1-203ENST00000518928 940 ntTSL 316.99■□□□□ 0.319e-6■■□□□ 13.2
XRN2Q9H0D6 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.319e-6■■□□□ 13.2
XRN2Q9H0D6 ABCD4-224ENST00000556119 838 ntTSL 516.98■□□□□ 0.319e-6■■□□□ 13.2
XRN2Q9H0D6 TMEM8A-207ENST00000475348 639 ntTSL 216.96■□□□□ 0.319e-6■■□□□ 13.2
XRN2Q9H0D6 C19orf54-206ENST00000596940 492 ntTSL 316.94■□□□□ 0.39e-6■■□□□ 13.2
XRN2Q9H0D6 OGG1-207ENST00000352937 1392 ntTSL 1 (best)16.82■□□□□ 0.289e-6■■□□□ 13.2
XRN2Q9H0D6 ABCD4-218ENST00000553486 1842 ntTSL 1 (best)16.73■□□□□ 0.279e-6■■□□□ 13.2
XRN2Q9H0D6 PRH1-205ENST00000541977 507 ntTSL 216.71■□□□□ 0.279e-6■■□□□ 13.2
XRN2Q9H0D6 AKT2-227ENST00000498350 562 ntTSL 416.65■□□□□ 0.269e-6■■□□□ 13.2
XRN2Q9H0D6 DMKN-265ENST00000601368 752 ntTSL 216.63■□□□□ 0.259e-6■■□□□ 13.2
XRN2Q9H0D6 DDX56-208ENST00000467318 1665 ntTSL 516.59■□□□□ 0.259e-6■■□□□ 13.2
XRN2Q9H0D6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.249e-6■■□□□ 13.2
XRN2Q9H0D6 ATP5C1-203ENST00000460362 414 ntTSL 316.56■□□□□ 0.249e-6■■□□□ 13.2
XRN2Q9H0D6 FAM76B-202ENST00000398187 3823 ntTSL 1 (best)16.44■□□□□ 0.229e-6■■□□□ 13.2
XRN2Q9H0D6 BZW1-208ENST00000452206 1059 ntTSL 516.38■□□□□ 0.219e-6■■□□□ 13.2
XRN2Q9H0D6 ABCD4-226ENST00000556971 637 ntTSL 316.35■□□□□ 0.219e-6■■□□□ 13.2
XRN2Q9H0D6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.29e-6■■□□□ 13.2
XRN2Q9H0D6 CPSF4-210ENST00000469897 689 ntTSL 216.1■□□□□ 0.179e-6■■□□□ 13.2
XRN2Q9H0D6 CASP3-204ENST00000447121 549 ntTSL 316.09■□□□□ 0.179e-6■■□□□ 13.2
XRN2Q9H0D6 CASP3-205ENST00000517513 964 ntTSL 5 BASIC16.09■□□□□ 0.179e-6■■□□□ 13.2
XRN2Q9H0D6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.169e-6■■□□□ 13.2
XRN2Q9H0D6 ARID3A-203ENST00000585733 581 ntTSL 216.03■□□□□ 0.169e-6■■□□□ 13.2
XRN2Q9H0D6 KIFC3-214ENST00000563266 568 ntTSL 215.98■□□□□ 0.159e-6■■□□□ 13.2
XRN2Q9H0D6 MAPK8IP3-211ENST00000567352 507 ntTSL 215.94■□□□□ 0.149e-6■■□□□ 13.2
XRN2Q9H0D6 SGSH-211ENST00000574505 587 ntTSL 515.93■□□□□ 0.149e-6■■□□□ 13.2
XRN2Q9H0D6 SSUH2-216ENST00000495366 2386 ntTSL 215.87■□□□□ 0.139e-6■■□□□ 13.2
XRN2Q9H0D6 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.139e-6■■□□□ 13.2
XRN2Q9H0D6 TMEM63B-203ENST00000371893 2921 ntTSL 1 (best)15.78■□□□□ 0.129e-6■■□□□ 13.2
XRN2Q9H0D6 PLXNB1-208ENST00000465117 627 ntTSL 315.77■□□□□ 0.129e-6■■□□□ 13.2
XRN2Q9H0D6 R3HDM4-207ENST00000591829 823 ntTSL 515.76■□□□□ 0.119e-6■■□□□ 13.2
XRN2Q9H0D6 NAXD-203ENST00000470164 2377 ntTSL 215.74■□□□□ 0.119e-6■■□□□ 13.2
XRN2Q9H0D6 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.72■□□□□ 0.119e-6■■□□□ 13.2
XRN2Q9H0D6 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.089e-6■■□□□ 13.2
XRN2Q9H0D6 IL4I1-207ENST00000597295 651 ntTSL 315.55■□□□□ 0.089e-6■■□□□ 13.2
XRN2Q9H0D6 ABCD4-205ENST00000469672 966 ntTSL 1 (best)15.52■□□□□ 0.089e-6■■□□□ 13.2
XRN2Q9H0D6 NUP62-216ENST00000599560 562 ntTSL 215.51■□□□□ 0.079e-6■■□□□ 13.2
XRN2Q9H0D6 RPH3AL-211ENST00000573588 593 ntTSL 415.46■□□□□ 0.079e-6■■□□□ 13.2
XRN2Q9H0D6 ABCD4-222ENST00000555617 542 ntTSL 415.45■□□□□ 0.069e-6■■□□□ 13.2
XRN2Q9H0D6 NUP62-223ENST00000601665 531 ntTSL 515.44■□□□□ 0.069e-6■■□□□ 13.2
XRN2Q9H0D6 NUP62-220ENST00000600583 782 ntTSL 415.43■□□□□ 0.069e-6■■□□□ 13.2
XRN2Q9H0D6 DMKN-243ENST00000478648 768 ntTSL 215.41■□□□□ 0.069e-6■■□□□ 13.2
XRN2Q9H0D6 MAPK8IP3-205ENST00000562042 330 ntTSL 315.39■□□□□ 0.059e-6■■□□□ 13.2
XRN2Q9H0D6 ABCD4-219ENST00000553745 1770 ntTSL 215.38■□□□□ 0.059e-6■■□□□ 13.2
XRN2Q9H0D6 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.38■□□□□ 0.059e-6■■□□□ 13.2
XRN2Q9H0D6 NR1H4-202ENST00000321046 1779 ntTSL 1 (best)15.35■□□□□ 0.059e-6■■□□□ 13.2
XRN2Q9H0D6 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.059e-6■■□□□ 13.2
XRN2Q9H0D6 PTPRF-214ENST00000496043 415 ntTSL 515.27■□□□□ 0.049e-6■■□□□ 13.2
XRN2Q9H0D6 CTSB-209ENST00000525315 586 ntTSL 215.11■□□□□ 0.019e-6■■□□□ 13.2
XRN2Q9H0D6 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.019e-6■■□□□ 13.2
XRN2Q9H0D6 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 09e-6■■□□□ 13.2
XRN2Q9H0D6 CPSF4-208ENST00000452047 687 ntTSL 314.96□□□□□ -0.019e-6■■□□□ 13.2
XRN2Q9H0D6 DDX56-205ENST00000433257 1682 ntTSL 514.93□□□□□ -0.029e-6■■□□□ 13.2
XRN2Q9H0D6 URM1-205ENST00000470840 723 ntTSL 214.87□□□□□ -0.039e-6■■□□□ 13.2
XRN2Q9H0D6 PSAP-203ENST00000493143 576 ntTSL 214.87□□□□□ -0.039e-6■■□□□ 13.2
XRN2Q9H0D6 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.059e-6■■□□□ 13.2
XRN2Q9H0D6 CLPTM1L-212ENST00000511786 559 ntTSL 514.73□□□□□ -0.059e-6■■□□□ 13.2
XRN2Q9H0D6 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.069e-6■■□□□ 13.2
XRN2Q9H0D6 DMKN-248ENST00000484064 658 ntTSL 214.66□□□□□ -0.069e-6■■□□□ 13.2
XRN2Q9H0D6 C19orf54-208ENST00000598352 546 ntTSL 1 (best)14.65□□□□□ -0.069e-6■■□□□ 13.2
XRN2Q9H0D6 TRAPPC12-207ENST00000433382 578 ntTSL 514.57□□□□□ -0.088e-6■■□□□ 13.2
XRN2Q9H0D6 MARS-220ENST00000549827 465 ntTSL 214.57□□□□□ -0.086e-6■■□□□ 13.2
XRN2Q9H0D6 NUP62-209ENST00000596437 894 ntTSL 414.54□□□□□ -0.089e-6■■□□□ 13.2
XRN2Q9H0D6 DMKN-238ENST00000472365 606 ntTSL 214.53□□□□□ -0.089e-6■■□□□ 13.2
XRN2Q9H0D6 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.099e-6■■□□□ 13.2
XRN2Q9H0D6 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.119e-6■■□□□ 13.2
XRN2Q9H0D6 RPH3AL-210ENST00000573448 487 ntTSL 514.38□□□□□ -0.119e-6■■□□□ 13.2
XRN2Q9H0D6 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.116e-6■■□□□ 13.2
XRN2Q9H0D6 PTPRF-213ENST00000481019 459 ntTSL 314.29□□□□□ -0.129e-6■■□□□ 13.2
XRN2Q9H0D6 ERGIC3-208ENST00000442139 472 ntTSL 314.24□□□□□ -0.139e-6■■□□□ 13.2
XRN2Q9H0D6 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.18□□□□□ -0.149e-6■■□□□ 13.2
XRN2Q9H0D6 ATP5C1-205ENST00000462760 573 ntTSL 214.18□□□□□ -0.149e-6■■□□□ 13.2
XRN2Q9H0D6 DDX56-206ENST00000446987 1853 ntTSL 514.17□□□□□ -0.149e-6■■□□□ 13.2
XRN2Q9H0D6 ERGIC3-220ENST00000640748 832 ntTSL 5 BASIC14.17□□□□□ -0.149e-6■■□□□ 13.2
XRN2Q9H0D6 ACADVL-228ENST00000582166 550 ntTSL 414.16□□□□□ -0.142e-12■■□□□ 13.2
XRN2Q9H0D6 SGSH-210ENST00000573150 2612 ntTSL 214.11□□□□□ -0.159e-6■■□□□ 13.2
XRN2Q9H0D6 TRAPPC12-217ENST00000473348 491 ntTSL 514.09□□□□□ -0.158e-6■■□□□ 13.2
XRN2Q9H0D6 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.179e-6■■□□□ 13.2
XRN2Q9H0D6 NUP62-222ENST00000600935 587 ntTSL 413.98□□□□□ -0.179e-6■■□□□ 13.2
XRN2Q9H0D6 ERGIC3-206ENST00000416206 1235 ntTSL 513.95□□□□□ -0.189e-6■■□□□ 13.2
XRN2Q9H0D6 DNAJB6-202ENST00000412557 506 ntTSL 313.94□□□□□ -0.189e-6■■□□□ 13.2
XRN2Q9H0D6 SGSH-213ENST00000575282 5562 ntTSL 1 (best)13.84□□□□□ -0.199e-6■■□□□ 13.2
XRN2Q9H0D6 CSDE1-215ENST00000533818 552 ntTSL 413.84□□□□□ -0.199e-6■■□□□ 13.2
XRN2Q9H0D6 ABCD4-211ENST00000481935 2336 ntTSL 513.81□□□□□ -0.29e-6■■□□□ 13.2
XRN2Q9H0D6 CPSF4-206ENST00000441580 942 ntTSL 2 BASIC13.73□□□□□ -0.219e-6■■□□□ 13.2
XRN2Q9H0D6 BSCL2-220ENST00000528874 553 ntTSL 413.71□□□□□ -0.219e-6■■□□□ 13.2
Retrieved 100 of 21,068 protein–RNA pairs in 207.9 ms