RNA–Protein interactions for RNA: ENST00000442139.5

ERGIC3-208, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-208ENST00000442139 NISCHQ9Y2I1 1504 aa29.79■■■□□ 2.36
ERGIC3-208ENST00000442139 CCDC180Q9P1Z9 1646 aa26.57■■□□□ 1.84
ERGIC3-208ENST00000442139 ABCC9O60706 1549 aa25.48■■□□□ 1.67
ERGIC3-208ENST00000442139 ZCCHC6Q5VYS8 1495 aaKnown RBP24.87■■□□□ 1.57
ERGIC3-208ENST00000442139 NACADO15069 1562 aa24.86■■□□□ 1.57
ERGIC3-208ENST00000442139 MYO15BQ96JP2 1530 aa24.82■■□□□ 1.56
ERGIC3-208ENST00000442139 RB1CC1Q8TDY2 1594 aa24.82■■□□□ 1.56
ERGIC3-208ENST00000442139 DCAF1Q9Y4B6 1507 aa24.78■■□□□ 1.56
ERGIC3-208ENST00000442139 DCAF8L2P0C7V8 631 aa24.62■■□□□ 1.53
ERGIC3-208ENST00000442139 UNC13AQ9UPW8 1703 aa24.27■■□□□ 1.48
ERGIC3-208ENST00000442139 SCRIBQ14160 1630 aa24.05■■□□□ 1.44
ERGIC3-208ENST00000442139 BICRAQ9NZM4 1560 aa23.94■■□□□ 1.42
ERGIC3-208ENST00000442139 SHROOM4Q9ULL8 1493 aa23.93■■□□□ 1.42
ERGIC3-208ENST00000442139 PABPN1Q86U42 306 aaKnown RBP eCLIP23.75■■□□□ 1.395e-10■■□□□ 14.5
ERGIC3-208ENST00000442139 EIF4G1Q04637 1599 aaKnown RBP23.32■■□□□ 1.32
ERGIC3-208ENST00000442139 CC2D2AQ9P2K1 1620 aa23.17■■□□□ 1.3
ERGIC3-208ENST00000442139 BAZ1AQ9NRL2 1556 aaPredicted RBP23.14■■□□□ 1.3
ERGIC3-208ENST00000442139 SMARCA4P51532 1647 aa23.1■■□□□ 1.29
ERGIC3-208ENST00000442139 CECR2Q9BXF3 1484 aa23.05■■□□□ 1.28
ERGIC3-208ENST00000442139 DNAJC5BQ9UF47 199 aa23.03■■□□□ 1.28
ERGIC3-208ENST00000442139 SMARCA2P51531 1590 aa22.96■■□□□ 1.27
ERGIC3-208ENST00000442139 PEG3Q9GZU2 1588 aa22.92■■□□□ 1.26
ERGIC3-208ENST00000442139 MROH2BQ7Z745 1585 aa22.89■■□□□ 1.25
ERGIC3-208ENST00000442139 ATAD2BQ9ULI0 1458 aa22.85■■□□□ 1.25
ERGIC3-208ENST00000442139 NCAPD3P42695 1498 aa22.85■■□□□ 1.25
ERGIC3-208ENST00000442139 HMGXB3Q12766 1538 aa22.82■■□□□ 1.24
ERGIC3-208ENST00000442139 BAZ1BQ9UIG0 1483 aaKnown RBP22.72■■□□□ 1.23
ERGIC3-208ENST00000442139 RSF1Q96T23 1441 aaPredicted RBP22.71■■□□□ 1.23
ERGIC3-208ENST00000442139 WIZO95785 1651 aa22.69■■□□□ 1.22
ERGIC3-208ENST00000442139 TOP2AP11388 1531 aaKnown RBP22.53■■□□□ 1.2
ERGIC3-208ENST00000442139 LAMC3Q9Y6N6 1575 aa22.29■■□□□ 1.16
ERGIC3-208ENST00000442139 SUPT5HO00267 1087 aaKnown RBP22.21■■□□□ 1.15
ERGIC3-208ENST00000442139 PRDM2Q13029 1718 aa22.18■■□□□ 1.14
ERGIC3-208ENST00000442139 CCDC88BA6NC98 1476 aa22.17■■□□□ 1.14
ERGIC3-208ENST00000442139 CADPSQ9ULU8 1353 aa22.16■■□□□ 1.14
ERGIC3-208ENST00000442139 CFTRP13569 1480 aa22.1■■□□□ 1.13
ERGIC3-208ENST00000442139 NESP48681 1621 aa22.09■■□□□ 1.13
ERGIC3-208ENST00000442139 PDS5BQ9NTI5 1447 aa22.08■■□□□ 1.13
ERGIC3-208ENST00000442139 ERCC6Q03468 1493 aa22.04■■□□□ 1.12
ERGIC3-208ENST00000442139 KIF21AQ7Z4S6 1674 aa22■■□□□ 1.11
ERGIC3-208ENST00000442139 FANCD2Q9BXW9 1451 aa21.9■■□□□ 1.1
ERGIC3-208ENST00000442139 CEP164Q9UPV0 1460 aa21.9■■□□□ 1.1
ERGIC3-208ENST00000442139 THOC2Q8NI27 1593 aaKnown RBP21.85■■□□□ 1.09
ERGIC3-208ENST00000442139 MRC2Q9UBG0 1479 aa21.81■■□□□ 1.08
ERGIC3-208ENST00000442139 CUX2O14529 1486 aa21.79■■□□□ 1.08
ERGIC3-208ENST00000442139 WDR62O43379 1518 aa21.75■■□□□ 1.07
ERGIC3-208ENST00000442139 ABCC8Q09428 1581 aa21.75■■□□□ 1.07
ERGIC3-208ENST00000442139 DNMBPQ6XZF7 1577 aa21.65■■□□□ 1.06
ERGIC3-208ENST00000442139 URB2Q14146 1524 aaKnown RBP21.64■■□□□ 1.05
ERGIC3-208ENST00000442139 TOPBP1Q92547 1522 aa21.59■■□□□ 1.05
ERGIC3-208ENST00000442139 BIVM-ERCC5R4GMW8 1640 aa21.48■■□□□ 1.03
ERGIC3-208ENST00000442139 CUX1P39880 1505 aa21.48■■□□□ 1.03
ERGIC3-208ENST00000442139 WRNQ14191 1432 aaPredicted RBP eCLIP21.46■■□□□ 1.03
ERGIC3-208ENST00000442139 TOP2BQ02880 1626 aa21.45■■□□□ 1.02
ERGIC3-208ENST00000442139 IFT140Q96RY7 1462 aa21.45■■□□□ 1.02
ERGIC3-208ENST00000442139 POLA1P09884 1462 aaPredicted RBP21.4■■□□□ 1.02
ERGIC3-208ENST00000442139 WDR97A6NE52 1622 aa21.39■■□□□ 1.01
ERGIC3-208ENST00000442139 FGD5Q6ZNL6 1462 aa21.38■■□□□ 1.01
ERGIC3-208ENST00000442139 TARBP1Q13395 1621 aaKnown RBP21.37■■□□□ 1.01
ERGIC3-208ENST00000442139 SYNJ1O43426 1573 aa21.36■■□□□ 1.01
ERGIC3-208ENST00000442139 SOGA1O94964 1423 aa21.32■■□□□ 1
ERGIC3-208ENST00000442139 ABCA10Q8WWZ4 1543 aa21.24■□□□□ 0.99
ERGIC3-208ENST00000442139 EIF4G3O43432 1585 aaKnown RBP21.24■□□□□ 0.99
ERGIC3-208ENST00000442139 RAD54L2Q9Y4B4 1467 aa21.22■□□□□ 0.99
ERGIC3-208ENST00000442139 ZNF608Q9ULD9 1512 aaPredicted RBP21.19■□□□□ 0.98
ERGIC3-208ENST00000442139 ABCA5Q8WWZ7 1642 aa21.16■□□□□ 0.98
ERGIC3-208ENST00000442139 PBRM1Q86U86 1689 aa21.15■□□□□ 0.98
ERGIC3-208ENST00000442139 GAPVD1Q14C86 1478 aa21.11■□□□□ 0.97
ERGIC3-208ENST00000442139 AQRO60306 1485 aaKnown RBP eCLIP21.1■□□□□ 0.972e-7■■■■□ 23.4
ERGIC3-208ENST00000442139 GRIN2BQ13224 1484 aa21.09■□□□□ 0.97
ERGIC3-208ENST00000442139 TDRD9Q8NDG6 1382 aaKnown RBP21.09■□□□□ 0.97
ERGIC3-208ENST00000442139 TRIM41Q8WV44 630 aa21.07■□□□□ 0.96
ERGIC3-208ENST00000442139 MAGI1Q96QZ7 1491 aaPredicted RBP21.07■□□□□ 0.96
ERGIC3-208ENST00000442139 ERICH3Q5RHP9 1530 aa21.04■□□□□ 0.96
ERGIC3-208ENST00000442139 KIF27Q86VH2 1401 aa21.04■□□□□ 0.96
ERGIC3-208ENST00000442139 SNAPC4Q5SXM2 1469 aa20.97■□□□□ 0.95
ERGIC3-208ENST00000442139 CHD1O14646 1710 aa20.97■□□□□ 0.95
ERGIC3-208ENST00000442139 CUL7Q14999 1698 aa20.96■□□□□ 0.95
ERGIC3-208ENST00000442139 SYNJ2O15056 1496 aa20.94■□□□□ 0.94
ERGIC3-208ENST00000442139 ADAMTS12P58397 1594 aa20.93■□□□□ 0.94
ERGIC3-208ENST00000442139 FHAD1B1AJZ9 1412 aa20.89■□□□□ 0.94
ERGIC3-208ENST00000442139 CHIC1Q5VXU3 224 aa20.88■□□□□ 0.93
ERGIC3-208ENST00000442139 EEA1Q15075 1411 aa20.87■□□□□ 0.93
ERGIC3-208ENST00000442139 OSCARQ8IYS5 282 aa20.85■□□□□ 0.93
ERGIC3-208ENST00000442139 CHMP7Q8WUX9 453 aaPredicted RBP20.84■□□□□ 0.93
ERGIC3-208ENST00000442139 IGF1RP08069 1367 aa20.83■□□□□ 0.92
ERGIC3-208ENST00000442139 GRIN2AQ12879 1464 aa20.81■□□□□ 0.92
ERGIC3-208ENST00000442139 FBLN2P98095 1184 aa20.8■□□□□ 0.92
ERGIC3-208ENST00000442139 CARMIL1Q5VZK9 1371 aa20.74■□□□□ 0.91
ERGIC3-208ENST00000442139 RUSC2Q8N2Y8 1516 aa20.73■□□□□ 0.91
ERGIC3-208ENST00000442139 DNAJC5Q9H3Z4 198 aa20.72■□□□□ 0.91
ERGIC3-208ENST00000442139 NUP160Q12769 1436 aa20.7■□□□□ 0.9
ERGIC3-208ENST00000442139 RAPGEF2Q9Y4G8 1499 aa20.69■□□□□ 0.9
ERGIC3-208ENST00000442139 CLASP1Q7Z460 1538 aa20.69■□□□□ 0.9
ERGIC3-208ENST00000442139 CEP170Q5SW79 1584 aa20.66■□□□□ 0.9
ERGIC3-208ENST00000442139 CSRNP3Q8WYN3 585 aa20.65■□□□□ 0.9
ERGIC3-208ENST00000442139 PRXQ9BXM0 1461 aa20.64■□□□□ 0.89
ERGIC3-208ENST00000442139 CTTNBP2Q8WZ74 1663 aa20.61■□□□□ 0.89
ERGIC3-208ENST00000442139 KIF21BO75037 1637 aa20.6■□□□□ 0.89
ERGIC3-208ENST00000442139 KIAA0586Q9BVV6 1533 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms