RNA–Protein interactions for RNA: ENST00000357394.8

ERGIC3-203, Transcript of ERGIC and golgi 3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene ERGIC3, Length 1,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-203ENST00000357394 NISCHQ9Y2I1 1504 aa35.17■■■■□ 3.22
ERGIC3-203ENST00000357394 CCDC180Q9P1Z9 1646 aa31.46■■■□□ 2.63
ERGIC3-203ENST00000357394 ABCC9O60706 1549 aa31.15■■■□□ 2.58
ERGIC3-203ENST00000357394 RB1CC1Q8TDY2 1594 aa29.79■■■□□ 2.36
ERGIC3-203ENST00000357394 NACADO15069 1562 aa29.65■■■□□ 2.34
ERGIC3-203ENST00000357394 DCAF8L2P0C7V8 631 aa29.5■■■□□ 2.31
ERGIC3-203ENST00000357394 MYO15BQ96JP2 1530 aa29.34■■■□□ 2.29
ERGIC3-203ENST00000357394 ZCCHC6Q5VYS8 1495 aaKnown RBP29.23■■■□□ 2.27
ERGIC3-203ENST00000357394 UNC13AQ9UPW8 1703 aa29.14■■■□□ 2.25
ERGIC3-203ENST00000357394 DCAF1Q9Y4B6 1507 aa29.08■■■□□ 2.25
ERGIC3-203ENST00000357394 PABPN1Q86U42 306 aaKnown RBP eCLIP29.01■■■□□ 2.245e-10■■□□□ 14.5
ERGIC3-203ENST00000357394 BICRAQ9NZM4 1560 aa28.92■■■□□ 2.22
ERGIC3-203ENST00000357394 DNAJC5BQ9UF47 199 aa28.92■■■□□ 2.22
ERGIC3-203ENST00000357394 SCRIBQ14160 1630 aa28.68■■■□□ 2.18
ERGIC3-203ENST00000357394 SHROOM4Q9ULL8 1493 aa28.56■■■□□ 2.16
ERGIC3-203ENST00000357394 EIF4G1Q04637 1599 aaKnown RBP28.19■■■□□ 2.1
ERGIC3-203ENST00000357394 CC2D2AQ9P2K1 1620 aa28.16■■■□□ 2.1
ERGIC3-203ENST00000357394 CECR2Q9BXF3 1484 aa28.03■■■□□ 2.08
ERGIC3-203ENST00000357394 SMARCA4P51532 1647 aa27.39■■□□□ 1.98
ERGIC3-203ENST00000357394 NCAPD3P42695 1498 aa27.36■■□□□ 1.97
ERGIC3-203ENST00000357394 ATAD2BQ9ULI0 1458 aa27.32■■□□□ 1.96
ERGIC3-203ENST00000357394 BAZ1AQ9NRL2 1556 aaPredicted RBP27.29■■□□□ 1.96
ERGIC3-203ENST00000357394 SMARCA2P51531 1590 aa27.27■■□□□ 1.96
ERGIC3-203ENST00000357394 HMGXB3Q12766 1538 aa27.21■■□□□ 1.95
ERGIC3-203ENST00000357394 PEG3Q9GZU2 1588 aa27.12■■□□□ 1.93
ERGIC3-203ENST00000357394 MROH2BQ7Z745 1585 aa27.11■■□□□ 1.93
ERGIC3-203ENST00000357394 BAZ1BQ9UIG0 1483 aaKnown RBP27.08■■□□□ 1.93
ERGIC3-203ENST00000357394 ERCC6Q03468 1493 aa26.87■■□□□ 1.89
ERGIC3-203ENST00000357394 NESP48681 1621 aa26.85■■□□□ 1.89
ERGIC3-203ENST00000357394 WIZO95785 1651 aa26.8■■□□□ 1.88
ERGIC3-203ENST00000357394 CUX2O14529 1486 aa26.74■■□□□ 1.87
ERGIC3-203ENST00000357394 LAMC3Q9Y6N6 1575 aa26.72■■□□□ 1.87
ERGIC3-203ENST00000357394 RSF1Q96T23 1441 aaPredicted RBP26.64■■□□□ 1.86
ERGIC3-203ENST00000357394 THOC2Q8NI27 1593 aaKnown RBP26.55■■□□□ 1.84
ERGIC3-203ENST00000357394 CADPSQ9ULU8 1353 aa26.53■■□□□ 1.84
ERGIC3-203ENST00000357394 KIF21AQ7Z4S6 1674 aa26.53■■□□□ 1.84
ERGIC3-203ENST00000357394 PDS5BQ9NTI5 1447 aa26.52■■□□□ 1.84
ERGIC3-203ENST00000357394 TOP2AP11388 1531 aaKnown RBP26.49■■□□□ 1.83
ERGIC3-203ENST00000357394 DNAJC5Q9H3Z4 198 aa26.47■■□□□ 1.83
ERGIC3-203ENST00000357394 CFTRP13569 1480 aa26.31■■□□□ 1.8
ERGIC3-203ENST00000357394 MRC2Q9UBG0 1479 aa26.3■■□□□ 1.8
ERGIC3-203ENST00000357394 CEP164Q9UPV0 1460 aa26.26■■□□□ 1.79
ERGIC3-203ENST00000357394 FANCD2Q9BXW9 1451 aa26.25■■□□□ 1.79
ERGIC3-203ENST00000357394 WDR62O43379 1518 aa26.23■■□□□ 1.79
ERGIC3-203ENST00000357394 CCDC88BA6NC98 1476 aa26.16■■□□□ 1.78
ERGIC3-203ENST00000357394 PRDM2Q13029 1718 aa26.11■■□□□ 1.77
ERGIC3-203ENST00000357394 URB2Q14146 1524 aaKnown RBP26.03■■□□□ 1.76
ERGIC3-203ENST00000357394 TOPBP1Q92547 1522 aa25.79■■□□□ 1.72
ERGIC3-203ENST00000357394 ABCC8Q09428 1581 aa25.73■■□□□ 1.71
ERGIC3-203ENST00000357394 DNMBPQ6XZF7 1577 aa25.73■■□□□ 1.71
ERGIC3-203ENST00000357394 IFT140Q96RY7 1462 aa25.71■■□□□ 1.71
ERGIC3-203ENST00000357394 ZNF608Q9ULD9 1512 aaPredicted RBP25.65■■□□□ 1.7
ERGIC3-203ENST00000357394 SUPT5HO00267 1087 aaKnown RBP25.64■■□□□ 1.69
ERGIC3-203ENST00000357394 POLA1P09884 1462 aaPredicted RBP25.55■■□□□ 1.68
ERGIC3-203ENST00000357394 EIF4G3O43432 1585 aaKnown RBP25.55■■□□□ 1.68
ERGIC3-203ENST00000357394 TARBP1Q13395 1621 aaKnown RBP25.55■■□□□ 1.68
ERGIC3-203ENST00000357394 OSCARQ8IYS5 282 aa25.5■■□□□ 1.67
ERGIC3-203ENST00000357394 CUX1P39880 1505 aa25.46■■□□□ 1.67
ERGIC3-203ENST00000357394 AQRO60306 1485 aaKnown RBP eCLIP25.44■■□□□ 1.662e-7■■■■□ 24
ERGIC3-203ENST00000357394 RAD54L2Q9Y4B4 1467 aa25.44■■□□□ 1.66
ERGIC3-203ENST00000357394 FGD5Q6ZNL6 1462 aa25.43■■□□□ 1.66
ERGIC3-203ENST00000357394 SOGA1O94964 1423 aa25.4■■□□□ 1.66
ERGIC3-203ENST00000357394 TRIM41Q8WV44 630 aa25.32■■□□□ 1.64
ERGIC3-203ENST00000357394 TDRD9Q8NDG6 1382 aaKnown RBP25.32■■□□□ 1.64
ERGIC3-203ENST00000357394 WDR97A6NE52 1622 aa25.31■■□□□ 1.64
ERGIC3-203ENST00000357394 CHD1O14646 1710 aa25.3■■□□□ 1.64
ERGIC3-203ENST00000357394 SNAPC4Q5SXM2 1469 aa25.22■■□□□ 1.63
ERGIC3-203ENST00000357394 RIMBP3CA6NJZ7 1639 aa25.21■■□□□ 1.63
ERGIC3-203ENST00000357394 RIMBP3BA6NNM3 1639 aa25.21■■□□□ 1.63
ERGIC3-203ENST00000357394 RIMBP3Q9UFD9 1639 aa25.21■■□□□ 1.63
ERGIC3-203ENST00000357394 FBLN2P98095 1184 aa25.18■■□□□ 1.62
ERGIC3-203ENST00000357394 GRIN2BQ13224 1484 aa25.18■■□□□ 1.62
ERGIC3-203ENST00000357394 ARHGEF11O15085 1522 aa25.16■■□□□ 1.62
ERGIC3-203ENST00000357394 ABCA10Q8WWZ4 1543 aa25.16■■□□□ 1.62
ERGIC3-203ENST00000357394 MAGI1Q96QZ7 1491 aaPredicted RBP25.15■■□□□ 1.62
ERGIC3-203ENST00000357394 BIVM-ERCC5R4GMW8 1640 aa25.14■■□□□ 1.62
ERGIC3-203ENST00000357394 WRNQ14191 1432 aaPredicted RBP eCLIP25.13■■□□□ 1.61
ERGIC3-203ENST00000357394 TOP2BQ02880 1626 aa25.13■■□□□ 1.61
ERGIC3-203ENST00000357394 PBRM1Q86U86 1689 aa25.13■■□□□ 1.61
ERGIC3-203ENST00000357394 GAPVD1Q14C86 1478 aa25.12■■□□□ 1.61
ERGIC3-203ENST00000357394 SYNJ1O43426 1573 aa25.12■■□□□ 1.61
ERGIC3-203ENST00000357394 ABCA5Q8WWZ7 1642 aa25.12■■□□□ 1.61
ERGIC3-203ENST00000357394 SYNJ2O15056 1496 aa25.06■■□□□ 1.6
ERGIC3-203ENST00000357394 CHMP7Q8WUX9 453 aaPredicted RBP25.05■■□□□ 1.6
ERGIC3-203ENST00000357394 CLASP1Q7Z460 1538 aa25.02■■□□□ 1.6
ERGIC3-203ENST00000357394 ARAP1Q96P48 1450 aa24.93■■□□□ 1.58
ERGIC3-203ENST00000357394 ADAMTS12P58397 1594 aa24.91■■□□□ 1.58
ERGIC3-203ENST00000357394 CYB5RLQ6IPT4 315 aa24.9■■□□□ 1.58
ERGIC3-203ENST00000357394 GRIN2AQ12879 1464 aa24.86■■□□□ 1.57
ERGIC3-203ENST00000357394 ERICH3Q5RHP9 1530 aa24.85■■□□□ 1.57
ERGIC3-203ENST00000357394 FHAD1B1AJZ9 1412 aa24.82■■□□□ 1.56
ERGIC3-203ENST00000357394 CEP170Q5SW79 1584 aa24.77■■□□□ 1.56
ERGIC3-203ENST00000357394 NUP160Q12769 1436 aa24.77■■□□□ 1.56
ERGIC3-203ENST00000357394 ERCC6L2Q5T890 1561 aa24.64■■□□□ 1.54
ERGIC3-203ENST00000357394 SHROOM2Q13796 1616 aa24.63■■□□□ 1.53
ERGIC3-203ENST00000357394 KIF27Q86VH2 1401 aa24.62■■□□□ 1.53
ERGIC3-203ENST00000357394 IGF1RP08069 1367 aa24.57■■□□□ 1.52
ERGIC3-203ENST00000357394 CUL7Q14999 1698 aa24.56■■□□□ 1.52
ERGIC3-203ENST00000357394 RUSC2Q8N2Y8 1516 aa24.55■■□□□ 1.52
ERGIC3-203ENST00000357394 TRHP20396 242 aaPredicted RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms