RNA–Protein interactions for RNA: ENST00000326181.10

TRAF7-201, Transcript of TNF receptor associated factor 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF7, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7-201ENST00000326181 NISCHQ9Y2I1 1504 aa30.05■■■□□ 2.4
TRAF7-201ENST00000326181 SHROOM4Q9ULL8 1493 aa26.59■■□□□ 1.85
TRAF7-201ENST00000326181 SUPT5HO00267 1087 aaKnown RBP26.25■■□□□ 1.79
TRAF7-201ENST00000326181 DCAF8L2P0C7V8 631 aa25.79■■□□□ 1.72
TRAF7-201ENST00000326181 ZCCHC6Q5VYS8 1495 aaKnown RBP25.4■■□□□ 1.66
TRAF7-201ENST00000326181 CHIC1Q5VXU3 224 aa25.3■■□□□ 1.64
TRAF7-201ENST00000326181 MYO15BQ96JP2 1530 aa25.21■■□□□ 1.63
TRAF7-201ENST00000326181 PCGF6Q9BYE7 350 aa25.14■■□□□ 1.61
TRAF7-201ENST00000326181 CCDC180Q9P1Z9 1646 aa25.09■■□□□ 1.61
TRAF7-201ENST00000326181 HRCP23327 699 aa25.04■■□□□ 1.6
TRAF7-201ENST00000326181 LOC105371045A0A1W2PR82 267 aa24.85■■□□□ 1.57
TRAF7-201ENST00000326181 PPARGC1BQ86YN6 1023 aaKnown RBP24.81■■□□□ 1.56
TRAF7-201ENST00000326181 EHMT2Q96KQ7 1210 aa24.43■■□□□ 1.5
TRAF7-201ENST00000326181 FAM9AQ8IZU1 332 aaPredicted RBP24.37■■□□□ 1.49
TRAF7-201ENST00000326181 DCAF1Q9Y4B6 1507 aa24.34■■□□□ 1.49
TRAF7-201ENST00000326181 TRIM26Q12899 539 aaPredicted RBP24.3■■□□□ 1.48
TRAF7-201ENST00000326181 TRIM41Q8WV44 630 aa24.24■■□□□ 1.47
TRAF7-201ENST00000326181 SCRIBQ14160 1630 aa24.1■■□□□ 1.45
TRAF7-201ENST00000326181 RSF1Q96T23 1441 aaPredicted RBP24.02■■□□□ 1.44
TRAF7-201ENST00000326181 ABCC9O60706 1549 aa24■■□□□ 1.43
TRAF7-201ENST00000326181 RB1CC1Q8TDY2 1594 aa23.84■■□□□ 1.41
TRAF7-201ENST00000326181 ZEB1P37275 1124 aaPredicted RBP23.8■■□□□ 1.4
TRAF7-201ENST00000326181 TTBK1Q5TCY1 1321 aaPredicted RBP23.66■■□□□ 1.38
TRAF7-201ENST00000326181 CECR2Q9BXF3 1484 aa23.65■■□□□ 1.38
TRAF7-201ENST00000326181 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.55■■□□□ 1.36
TRAF7-201ENST00000326181 MROH2BQ7Z745 1585 aa23.51■■□□□ 1.35
TRAF7-201ENST00000326181 CCER1Q8TC90 406 aaPredicted RBP23.49■■□□□ 1.35
TRAF7-201ENST00000326181 WIZO95785 1651 aa23.4■■□□□ 1.34
TRAF7-201ENST00000326181 SCAF1Q9H7N4 1312 aaKnown RBP23.38■■□□□ 1.33
TRAF7-201ENST00000326181 NACADO15069 1562 aa23.29■■□□□ 1.32
TRAF7-201ENST00000326181 UBTFP17480 764 aaKnown RBP23.17■■□□□ 1.3
TRAF7-201ENST00000326181 ABCC8Q09428 1581 aa23.13■■□□□ 1.29
TRAF7-201ENST00000326181 DIEXFQ68CQ4 756 aaKnown RBP23.09■■□□□ 1.29
TRAF7-201ENST00000326181 CCDC88BA6NC98 1476 aa23.08■■□□□ 1.28
TRAF7-201ENST00000326181 BAZ1AQ9NRL2 1556 aaPredicted RBP23.06■■□□□ 1.28
TRAF7-201ENST00000326181 NEUROD1Q13562 356 aa23.05■■□□□ 1.28
TRAF7-201ENST00000326181 SOGA1O94964 1423 aa23.01■■□□□ 1.27
TRAF7-201ENST00000326181 PELP1Q8IZL8 1130 aaKnown RBP23.01■■□□□ 1.27
TRAF7-201ENST00000326181 ACIN1Q9UKV3 1341 aaKnown RBP23■■□□□ 1.27
TRAF7-201ENST00000326181 CEP162Q5TB80 1403 aa22.99■■□□□ 1.27
TRAF7-201ENST00000326181 RANGAP1P46060 587 aaPredicted RBP22.98■■□□□ 1.27
TRAF7-201ENST00000326181 PABPN1Q86U42 306 aaKnown RBP eCLIP22.96■■□□□ 1.27
TRAF7-201ENST00000326181 CSRNP3Q8WYN3 585 aa22.94■■□□□ 1.26
TRAF7-201ENST00000326181 GTF3C3Q9Y5Q9 886 aa22.91■■□□□ 1.26
TRAF7-201ENST00000326181 HNRNPUL2Q1KMD3 747 aaKnown RBP22.9■■□□□ 1.26
TRAF7-201ENST00000326181 CENPBP07199 599 aaPredicted RBP22.9■■□□□ 1.26
TRAF7-201ENST00000326181 YTHDC1Q96MU7 727 aaKnown RBP22.89■■□□□ 1.26
TRAF7-201ENST00000326181 RUSC2Q8N2Y8 1516 aa22.88■■□□□ 1.25
TRAF7-201ENST00000326181 EIF4G1Q04637 1599 aaKnown RBP22.87■■□□□ 1.25
TRAF7-201ENST00000326181 TOP2AP11388 1531 aaKnown RBP22.86■■□□□ 1.25
TRAF7-201ENST00000326181 TNIKQ9UKE5 1360 aa22.81■■□□□ 1.24
TRAF7-201ENST00000326181 SMARCA4P51532 1647 aa22.8■■□□□ 1.24
TRAF7-201ENST00000326181 SMARCA2P51531 1590 aa22.79■■□□□ 1.24
TRAF7-201ENST00000326181 WRNQ14191 1432 aaPredicted RBP eCLIP22.77■■□□□ 1.24
TRAF7-201ENST00000326181 ZNF316A6NFI3 1004 aaPredicted RBP22.73■■□□□ 1.23
TRAF7-201ENST00000326181 APLP2Q06481 763 aa22.7■■□□□ 1.22
TRAF7-201ENST00000326181 GOLGA3Q08378 1498 aa22.65■■□□□ 1.22
TRAF7-201ENST00000326181 EEA1Q15075 1411 aa22.61■■□□□ 1.21
TRAF7-201ENST00000326181 MIER1Q8N108 512 aa22.56■■□□□ 1.2
TRAF7-201ENST00000326181 UNC13AQ9UPW8 1703 aa22.53■■□□□ 1.2
TRAF7-201ENST00000326181 CLIP1P30622 1438 aa22.53■■□□□ 1.2
TRAF7-201ENST00000326181 CEP164Q9UPV0 1460 aa22.45■■□□□ 1.19
TRAF7-201ENST00000326181 SYNJ1O43426 1573 aa22.41■■□□□ 1.18
TRAF7-201ENST00000326181 RAPGEF2Q9Y4G8 1499 aa22.37■■□□□ 1.17
TRAF7-201ENST00000326181 VPS8Q8N3P4 1428 aa22.34■■□□□ 1.17
TRAF7-201ENST00000326181 ITGAEP38570 1179 aa22.31■■□□□ 1.16
TRAF7-201ENST00000326181 BAZ1BQ9UIG0 1483 aaKnown RBP22.29■■□□□ 1.16
TRAF7-201ENST00000326181 BICRAQ9NZM4 1560 aa22.28■■□□□ 1.16
TRAF7-201ENST00000326181 ATAD2BQ9ULI0 1458 aa22.23■■□□□ 1.15
TRAF7-201ENST00000326181 KIF21BO75037 1637 aa22.23■■□□□ 1.15
TRAF7-201ENST00000326181 KANK4Q5T7N3 995 aaPredicted RBP22.21■■□□□ 1.15
TRAF7-201ENST00000326181 PEG3Q9GZU2 1588 aa22.09■■□□□ 1.13
TRAF7-201ENST00000326181 DHX57Q6P158 1386 aaKnown RBP22.06■■□□□ 1.12
TRAF7-201ENST00000326181 ATP1B4Q9UN42 357 aaPredicted RBP22.01■■□□□ 1.11
TRAF7-201ENST00000326181 ARAP1Q96P48 1450 aa21.97■■□□□ 1.11
TRAF7-201ENST00000326181 TOP2BQ02880 1626 aa21.97■■□□□ 1.11
TRAF7-201ENST00000326181 CLSPNQ9HAW4 1339 aa21.91■■□□□ 1.1
TRAF7-201ENST00000326181 PRXQ9BXM0 1461 aa21.9■■□□□ 1.1
TRAF7-201ENST00000326181 P3H3Q8IVL6 736 aa21.9■■□□□ 1.1
TRAF7-201ENST00000326181 KIF27Q86VH2 1401 aa21.89■■□□□ 1.1
TRAF7-201ENST00000326181 FAM50AQ14320 339 aaKnown RBP21.88■■□□□ 1.09
TRAF7-201ENST00000326181 CCNB3Q8WWL7 1395 aa21.87■■□□□ 1.09
TRAF7-201ENST00000326181 SUPT16HQ9Y5B9 1047 aaKnown RBP21.87■■□□□ 1.09
TRAF7-201ENST00000326181 KCNH8Q96L42 1107 aa21.87■■□□□ 1.09
TRAF7-201ENST00000326181 MYT1Q01538 1121 aa21.84■■□□□ 1.09
TRAF7-201ENST00000326181 CUX1P39880 1505 aa21.82■■□□□ 1.08
TRAF7-201ENST00000326181 ERICH3Q5RHP9 1530 aa21.82■■□□□ 1.08
TRAF7-201ENST00000326181 BCANQ96GW7 911 aa21.81■■□□□ 1.08
TRAF7-201ENST00000326181 HIRIP3Q9BW71 556 aaPredicted RBP21.8■■□□□ 1.08
TRAF7-201ENST00000326181 BIVM-ERCC5R4GMW8 1640 aa21.78■■□□□ 1.08
TRAF7-201ENST00000326181 SIN3AQ96ST3 1273 aa21.78■■□□□ 1.08
TRAF7-201ENST00000326181 DDX10Q13206 875 aaKnown RBP21.77■■□□□ 1.08
TRAF7-201ENST00000326181 RAB3GAP2Q9H2M9 1393 aa21.77■■□□□ 1.08
TRAF7-201ENST00000326181 RRBP1Q9P2E9 1410 aaKnown RBP21.77■■□□□ 1.08
TRAF7-201ENST00000326181 ARHGAP35Q9NRY4 1499 aa21.76■■□□□ 1.07
TRAF7-201ENST00000326181 CUX2O14529 1486 aa21.72■■□□□ 1.07
TRAF7-201ENST00000326181 NCAPD3P42695 1498 aa21.63■■□□□ 1.05
TRAF7-201ENST00000326181 IGF1RP08069 1367 aa21.63■■□□□ 1.05
TRAF7-201ENST00000326181 CARMIL1Q5VZK9 1371 aa21.62■■□□□ 1.05
TRAF7-201ENST00000326181 SETD5Q9C0A6 1442 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms