RNA–Protein interactions for RNA: ENST00000556119.5

ABCD4-224, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-224ENST00000556119 NISCHQ9Y2I1 1504 aa34.47■■■■□ 3.11
ABCD4-224ENST00000556119 ABCC9O60706 1549 aa32.17■■■□□ 2.74
ABCD4-224ENST00000556119 CCDC180Q9P1Z9 1646 aa31.3■■■□□ 2.6
ABCD4-224ENST00000556119 DNAJC5BQ9UF47 199 aa31.05■■■□□ 2.56
ABCD4-224ENST00000556119 RB1CC1Q8TDY2 1594 aa30.2■■■□□ 2.43
ABCD4-224ENST00000556119 PABPN1Q86U42 306 aaKnown RBP eCLIP29.84■■■□□ 2.37
ABCD4-224ENST00000556119 NACADO15069 1562 aa29.79■■■□□ 2.36
ABCD4-224ENST00000556119 UNC13AQ9UPW8 1703 aa29.63■■■□□ 2.33
ABCD4-224ENST00000556119 DCAF8L2P0C7V8 631 aa29.49■■■□□ 2.31
ABCD4-224ENST00000556119 BICRAQ9NZM4 1560 aa29.43■■■□□ 2.3
ABCD4-224ENST00000556119 DNAJC5Q9H3Z4 198 aa29.1■■■□□ 2.25
ABCD4-224ENST00000556119 MYO15BQ96JP2 1530 aa29.08■■■□□ 2.25
ABCD4-224ENST00000556119 CECR2Q9BXF3 1484 aa29.06■■■□□ 2.24
ABCD4-224ENST00000556119 CC2D2AQ9P2K1 1620 aa29.03■■■□□ 2.24
ABCD4-224ENST00000556119 SHROOM4Q9ULL8 1493 aa28.83■■■□□ 2.21
ABCD4-224ENST00000556119 EIF4G1Q04637 1599 aaKnown RBP28.74■■■□□ 2.19
ABCD4-224ENST00000556119 SCRIBQ14160 1630 aa28.47■■■□□ 2.15
ABCD4-224ENST00000556119 DCAF1Q9Y4B6 1507 aa28.39■■■□□ 2.14
ABCD4-224ENST00000556119 ZCCHC6Q5VYS8 1495 aaKnown RBP28.35■■■□□ 2.13
ABCD4-224ENST00000556119 CUX2O14529 1486 aa28.05■■■□□ 2.08
ABCD4-224ENST00000556119 ERCC6Q03468 1493 aa27.79■■■□□ 2.04
ABCD4-224ENST00000556119 NCAPD3P42695 1498 aa27.53■■■□□ 2
ABCD4-224ENST00000556119 TRIM41Q8WV44 630 aa27.44■■□□□ 1.98
ABCD4-224ENST00000556119 NESP48681 1621 aa27.41■■□□□ 1.98
ABCD4-224ENST00000556119 ATAD2BQ9ULI0 1458 aa27.32■■□□□ 1.96
ABCD4-224ENST00000556119 THOC2Q8NI27 1593 aaKnown RBP27.29■■□□□ 1.96
ABCD4-224ENST00000556119 HMGXB3Q12766 1538 aa27.21■■□□□ 1.95
ABCD4-224ENST00000556119 SMARCA2P51531 1590 aa27.17■■□□□ 1.94
ABCD4-224ENST00000556119 SMARCA4P51532 1647 aa27.08■■□□□ 1.93
ABCD4-224ENST00000556119 KIF21AQ7Z4S6 1674 aa27.05■■□□□ 1.92
ABCD4-224ENST00000556119 LAMC3Q9Y6N6 1575 aa27.03■■□□□ 1.92
ABCD4-224ENST00000556119 BAZ1BQ9UIG0 1483 aaKnown RBP26.98■■□□□ 1.91
ABCD4-224ENST00000556119 PDS5BQ9NTI5 1447 aa26.89■■□□□ 1.89
ABCD4-224ENST00000556119 PEG3Q9GZU2 1588 aa26.82■■□□□ 1.88
ABCD4-224ENST00000556119 BAZ1AQ9NRL2 1556 aaPredicted RBP26.78■■□□□ 1.88
ABCD4-224ENST00000556119 MRC2Q9UBG0 1479 aa26.71■■□□□ 1.87
ABCD4-224ENST00000556119 WDR62O43379 1518 aa26.7■■□□□ 1.86
ABCD4-224ENST00000556119 OSCARQ8IYS5 282 aa26.66■■□□□ 1.86
ABCD4-224ENST00000556119 CADPSQ9ULU8 1353 aa26.64■■□□□ 1.86
ABCD4-224ENST00000556119 MROH2BQ7Z745 1585 aa26.57■■□□□ 1.84
ABCD4-224ENST00000556119 RIMBP3CA6NJZ7 1639 aa26.43■■□□□ 1.82
ABCD4-224ENST00000556119 RIMBP3BA6NNM3 1639 aa26.43■■□□□ 1.82
ABCD4-224ENST00000556119 RIMBP3Q9UFD9 1639 aa26.43■■□□□ 1.82
ABCD4-224ENST00000556119 CEP164Q9UPV0 1460 aa26.42■■□□□ 1.82
ABCD4-224ENST00000556119 FANCD2Q9BXW9 1451 aa26.34■■□□□ 1.81
ABCD4-224ENST00000556119 ARHGEF11O15085 1522 aa26.23■■□□□ 1.79
ABCD4-224ENST00000556119 WIZO95785 1651 aa26.22■■□□□ 1.79
ABCD4-224ENST00000556119 URB2Q14146 1524 aaKnown RBP26.2■■□□□ 1.79
ABCD4-224ENST00000556119 CFTRP13569 1480 aa26.16■■□□□ 1.78
ABCD4-224ENST00000556119 CYB5RLQ6IPT4 315 aa26.12■■□□□ 1.77
ABCD4-224ENST00000556119 TRHP20396 242 aaPredicted RBP26.07■■□□□ 1.76
ABCD4-224ENST00000556119 ZNF608Q9ULD9 1512 aaPredicted RBP26.04■■□□□ 1.76
ABCD4-224ENST00000556119 AEBP2Q6ZN18 517 aaPredicted RBP25.94■■□□□ 1.74
ABCD4-224ENST00000556119 IFT140Q96RY7 1462 aa25.93■■□□□ 1.74
ABCD4-224ENST00000556119 ARAP1Q96P48 1450 aa25.91■■□□□ 1.74
ABCD4-224ENST00000556119 PRDM2Q13029 1718 aa25.85■■□□□ 1.73
ABCD4-224ENST00000556119 CHD1O14646 1710 aa25.83■■□□□ 1.73
ABCD4-224ENST00000556119 EIF4G3O43432 1585 aaKnown RBP25.82■■□□□ 1.72
ABCD4-224ENST00000556119 TOP2AP11388 1531 aaKnown RBP25.77■■□□□ 1.72
ABCD4-224ENST00000556119 TOPBP1Q92547 1522 aa25.75■■□□□ 1.71
ABCD4-224ENST00000556119 RSF1Q96T23 1441 aaPredicted RBP25.74■■□□□ 1.71
ABCD4-224ENST00000556119 AQRO60306 1485 aaKnown RBP eCLIP25.69■■□□□ 1.77e-8■■■■■ 35.6
ABCD4-224ENST00000556119 FBLN2P98095 1184 aa25.67■■□□□ 1.7
ABCD4-224ENST00000556119 TARBP1Q13395 1621 aaKnown RBP25.63■■□□□ 1.69
ABCD4-224ENST00000556119 ABCC8Q09428 1581 aa25.61■■□□□ 1.69
ABCD4-224ENST00000556119 DNMBPQ6XZF7 1577 aa25.56■■□□□ 1.68
ABCD4-224ENST00000556119 CCDC88BA6NC98 1476 aa25.53■■□□□ 1.68
ABCD4-224ENST00000556119 CLASP1Q7Z460 1538 aa25.48■■□□□ 1.67
ABCD4-224ENST00000556119 POLA1P09884 1462 aaPredicted RBP25.44■■□□□ 1.66
ABCD4-224ENST00000556119 TDRD9Q8NDG6 1382 aaKnown RBP25.38■■□□□ 1.65
ABCD4-224ENST00000556119 RAD54L2Q9Y4B4 1467 aa25.38■■□□□ 1.65
ABCD4-224ENST00000556119 SNAPC4Q5SXM2 1469 aa25.35■■□□□ 1.65
ABCD4-224ENST00000556119 SYNJ1O43426 1573 aa25.35■■□□□ 1.65
ABCD4-224ENST00000556119 CHMP7Q8WUX9 453 aaPredicted RBP25.33■■□□□ 1.65
ABCD4-224ENST00000556119 SOGA1O94964 1423 aa25.3■■□□□ 1.64
ABCD4-224ENST00000556119 GAPVD1Q14C86 1478 aa25.28■■□□□ 1.64
ABCD4-224ENST00000556119 MAGI1Q96QZ7 1491 aaPredicted RBP25.24■■□□□ 1.63
ABCD4-224ENST00000556119 WDR97A6NE52 1622 aa25.23■■□□□ 1.63
ABCD4-224ENST00000556119 SYNJ2O15056 1496 aa25.19■■□□□ 1.62
ABCD4-224ENST00000556119 GRIN2BQ13224 1484 aa25.15■■□□□ 1.62
ABCD4-224ENST00000556119 FGD5Q6ZNL6 1462 aa25.15■■□□□ 1.62
ABCD4-224ENST00000556119 ERCC6L2Q5T890 1561 aa25.06■■□□□ 1.6
ABCD4-224ENST00000556119 PBRM1Q86U86 1689 aa25.04■■□□□ 1.6
ABCD4-224ENST00000556119 KIF13AQ9H1H9 1805 aa25.03■■□□□ 1.6
ABCD4-224ENST00000556119 CUX1P39880 1505 aa25■■□□□ 1.59
ABCD4-224ENST00000556119 ILDR1Q86SU0 546 aaPredicted RBP24.99■■□□□ 1.59
ABCD4-224ENST00000556119 CEP170Q5SW79 1584 aa24.9■■□□□ 1.58
ABCD4-224ENST00000556119 ABCA5Q8WWZ7 1642 aa24.86■■□□□ 1.57
ABCD4-224ENST00000556119 KDM4FA0A1W2PPD8 638 aa24.85■■□□□ 1.57
ABCD4-224ENST00000556119 GRIN2AQ12879 1464 aa24.84■■□□□ 1.57
ABCD4-224ENST00000556119 SHROOM2Q13796 1616 aa24.82■■□□□ 1.56
ABCD4-224ENST00000556119 ABCA10Q8WWZ4 1543 aa24.81■■□□□ 1.56
ABCD4-224ENST00000556119 NUP160Q12769 1436 aa24.8■■□□□ 1.56
ABCD4-224ENST00000556119 FAM69CQ0P6D2 419 aa24.75■■□□□ 1.55
ABCD4-224ENST00000556119 ADAMTS12P58397 1594 aa24.71■■□□□ 1.55
ABCD4-224ENST00000556119 ABCC10Q5T3U5 1492 aa24.71■■□□□ 1.55
ABCD4-224ENST00000556119 PRG4Q92954 1404 aaPredicted RBP24.64■■□□□ 1.54
ABCD4-224ENST00000556119 KDM6BO15054 1643 aa24.64■■□□□ 1.53
ABCD4-224ENST00000556119 DIP2BQ9P265 1576 aa24.63■■□□□ 1.53
ABCD4-224ENST00000556119 MAPKBP1O60336 1514 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms