RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 NISCHQ9Y2I1 1504 aa34.43■■■■□ 3.1
ABCD4-218ENST00000553486 ABCC9O60706 1549 aa30.85■■■□□ 2.53
ABCD4-218ENST00000553486 CCDC180Q9P1Z9 1646 aa30.84■■■□□ 2.53
ABCD4-218ENST00000553486 RB1CC1Q8TDY2 1594 aa29.37■■■□□ 2.29
ABCD4-218ENST00000553486 NACADO15069 1562 aa29.18■■■□□ 2.26
ABCD4-218ENST00000553486 DCAF8L2P0C7V8 631 aa29.04■■■□□ 2.24
ABCD4-218ENST00000553486 DNAJC5BQ9UF47 199 aa28.92■■■□□ 2.22
ABCD4-218ENST00000553486 MYO15BQ96JP2 1530 aa28.83■■■□□ 2.21
ABCD4-218ENST00000553486 PABPN1Q86U42 306 aaKnown RBP eCLIP28.73■■■□□ 2.194e-8■■□□□ 13.1
ABCD4-218ENST00000553486 UNC13AQ9UPW8 1703 aa28.63■■■□□ 2.17
ABCD4-218ENST00000553486 ZCCHC6Q5VYS8 1495 aaKnown RBP28.56■■■□□ 2.16
ABCD4-218ENST00000553486 BICRAQ9NZM4 1560 aa28.51■■■□□ 2.15
ABCD4-218ENST00000553486 DCAF1Q9Y4B6 1507 aa28.46■■■□□ 2.15
ABCD4-218ENST00000553486 SHROOM4Q9ULL8 1493 aa28.17■■■□□ 2.1
ABCD4-218ENST00000553486 SCRIBQ14160 1630 aa28.12■■■□□ 2.09
ABCD4-218ENST00000553486 CC2D2AQ9P2K1 1620 aa27.85■■■□□ 2.05
ABCD4-218ENST00000553486 EIF4G1Q04637 1599 aaKnown RBP27.82■■■□□ 2.04
ABCD4-218ENST00000553486 CECR2Q9BXF3 1484 aa27.8■■■□□ 2.04
ABCD4-218ENST00000553486 NCAPD3P42695 1498 aa26.97■■□□□ 1.91
ABCD4-218ENST00000553486 ATAD2BQ9ULI0 1458 aa26.88■■□□□ 1.89
ABCD4-218ENST00000553486 SUPT5HO00267 1087 aaKnown RBP26.86■■□□□ 1.89
ABCD4-218ENST00000553486 SMARCA4P51532 1647 aa26.83■■□□□ 1.89
ABCD4-218ENST00000553486 SMARCA2P51531 1590 aa26.8■■□□□ 1.88
ABCD4-218ENST00000553486 HMGXB3Q12766 1538 aa26.76■■□□□ 1.87
ABCD4-218ENST00000553486 BAZ1AQ9NRL2 1556 aaPredicted RBP26.73■■□□□ 1.87
ABCD4-218ENST00000553486 ERCC6Q03468 1493 aa26.64■■□□□ 1.85
ABCD4-218ENST00000553486 BAZ1BQ9UIG0 1483 aaKnown RBP26.62■■□□□ 1.85
ABCD4-218ENST00000553486 PEG3Q9GZU2 1588 aa26.6■■□□□ 1.85
ABCD4-218ENST00000553486 CUX2O14529 1486 aa26.58■■□□□ 1.85
ABCD4-218ENST00000553486 DNAJC5Q9H3Z4 198 aa26.54■■□□□ 1.84
ABCD4-218ENST00000553486 MROH2BQ7Z745 1585 aa26.53■■□□□ 1.84
ABCD4-218ENST00000553486 NESP48681 1621 aa26.51■■□□□ 1.83
ABCD4-218ENST00000553486 LAMC3Q9Y6N6 1575 aa26.33■■□□□ 1.81
ABCD4-218ENST00000553486 THOC2Q8NI27 1593 aaKnown RBP26.22■■□□□ 1.79
ABCD4-218ENST00000553486 PDS5BQ9NTI5 1447 aa26.2■■□□□ 1.78
ABCD4-218ENST00000553486 WIZO95785 1651 aa26.17■■□□□ 1.78
ABCD4-218ENST00000553486 CADPSQ9ULU8 1353 aa26.15■■□□□ 1.78
ABCD4-218ENST00000553486 RSF1Q96T23 1441 aaPredicted RBP26.14■■□□□ 1.77
ABCD4-218ENST00000553486 KIF21AQ7Z4S6 1674 aa26.12■■□□□ 1.77
ABCD4-218ENST00000553486 MRC2Q9UBG0 1479 aa25.96■■□□□ 1.75
ABCD4-218ENST00000553486 CHIC1Q5VXU3 224 aa25.93■■□□□ 1.74
ABCD4-218ENST00000553486 WDR62O43379 1518 aa25.89■■□□□ 1.74
ABCD4-218ENST00000553486 TOP2AP11388 1531 aaKnown RBP25.88■■□□□ 1.73
ABCD4-218ENST00000553486 CFTRP13569 1480 aa25.87■■□□□ 1.73
ABCD4-218ENST00000553486 CEP164Q9UPV0 1460 aa25.87■■□□□ 1.73
ABCD4-218ENST00000553486 FANCD2Q9BXW9 1451 aa25.85■■□□□ 1.73
ABCD4-218ENST00000553486 URB2Q14146 1524 aaKnown RBP25.62■■□□□ 1.69
ABCD4-218ENST00000553486 CCDC88BA6NC98 1476 aa25.59■■□□□ 1.69
ABCD4-218ENST00000553486 PRDM2Q13029 1718 aa25.5■■□□□ 1.67
ABCD4-218ENST00000553486 OSCARQ8IYS5 282 aa25.38■■□□□ 1.65
ABCD4-218ENST00000553486 TRIM41Q8WV44 630 aa25.37■■□□□ 1.65
ABCD4-218ENST00000553486 IFT140Q96RY7 1462 aa25.35■■□□□ 1.65
ABCD4-218ENST00000553486 TOPBP1Q92547 1522 aa25.35■■□□□ 1.65
ABCD4-218ENST00000553486 ZNF608Q9ULD9 1512 aaPredicted RBP25.3■■□□□ 1.64
ABCD4-218ENST00000553486 ABCC8Q09428 1581 aa25.3■■□□□ 1.64
ABCD4-218ENST00000553486 DNMBPQ6XZF7 1577 aa25.25■■□□□ 1.63
ABCD4-218ENST00000553486 EIF4G3O43432 1585 aaKnown RBP25.15■■□□□ 1.62
ABCD4-218ENST00000553486 TARBP1Q13395 1621 aaKnown RBP25.11■■□□□ 1.61
ABCD4-218ENST00000553486 POLA1P09884 1462 aaPredicted RBP25.1■■□□□ 1.61
ABCD4-218ENST00000553486 AQRO60306 1485 aaKnown RBP eCLIP25.08■■□□□ 1.613e-8■■■■■ 28.1
ABCD4-218ENST00000553486 RIMBP3CA6NJZ7 1639 aa25.01■■□□□ 1.59
ABCD4-218ENST00000553486 RIMBP3BA6NNM3 1639 aa25.01■■□□□ 1.59
ABCD4-218ENST00000553486 RIMBP3Q9UFD9 1639 aa25.01■■□□□ 1.59
ABCD4-218ENST00000553486 RAD54L2Q9Y4B4 1467 aa25■■□□□ 1.59
ABCD4-218ENST00000553486 SOGA1O94964 1423 aa24.98■■□□□ 1.59
ABCD4-218ENST00000553486 ARHGEF11O15085 1522 aa24.97■■□□□ 1.59
ABCD4-218ENST00000553486 LOC105371045A0A1W2PR82 267 aa24.97■■□□□ 1.59
ABCD4-218ENST00000553486 FGD5Q6ZNL6 1462 aa24.94■■□□□ 1.58
ABCD4-218ENST00000553486 TDRD9Q8NDG6 1382 aaKnown RBP24.94■■□□□ 1.58
ABCD4-218ENST00000553486 CUX1P39880 1505 aa24.92■■□□□ 1.58
ABCD4-218ENST00000553486 FBLN2P98095 1184 aa24.91■■□□□ 1.58
ABCD4-218ENST00000553486 CHD1O14646 1710 aa24.9■■□□□ 1.58
ABCD4-218ENST00000553486 WDR97A6NE52 1622 aa24.86■■□□□ 1.57
ABCD4-218ENST00000553486 SNAPC4Q5SXM2 1469 aa24.82■■□□□ 1.56
ABCD4-218ENST00000553486 CYB5RLQ6IPT4 315 aa24.78■■□□□ 1.56
ABCD4-218ENST00000553486 FAM9AQ8IZU1 332 aaPredicted RBP24.78■■□□□ 1.56
ABCD4-218ENST00000553486 MAGI1Q96QZ7 1491 aaPredicted RBP24.77■■□□□ 1.56
ABCD4-218ENST00000553486 GRIN2BQ13224 1484 aa24.77■■□□□ 1.56
ABCD4-218ENST00000553486 CHMP7Q8WUX9 453 aaPredicted RBP24.74■■□□□ 1.55
ABCD4-218ENST00000553486 ARAP1Q96P48 1450 aa24.73■■□□□ 1.55
ABCD4-218ENST00000553486 SYNJ2O15056 1496 aa24.69■■□□□ 1.54
ABCD4-218ENST00000553486 GAPVD1Q14C86 1478 aa24.68■■□□□ 1.54
ABCD4-218ENST00000553486 CLASP1Q7Z460 1538 aa24.68■■□□□ 1.54
ABCD4-218ENST00000553486 ABCA10Q8WWZ4 1543 aa24.67■■□□□ 1.54
ABCD4-218ENST00000553486 SYNJ1O43426 1573 aa24.66■■□□□ 1.54
ABCD4-218ENST00000553486 ABCA5Q8WWZ7 1642 aa24.61■■□□□ 1.53
ABCD4-218ENST00000553486 PBRM1Q86U86 1689 aa24.61■■□□□ 1.53
ABCD4-218ENST00000553486 WRNQ14191 1432 aaPredicted RBP eCLIP24.6■■□□□ 1.53
ABCD4-218ENST00000553486 TOP2BQ02880 1626 aa24.52■■□□□ 1.52
ABCD4-218ENST00000553486 EEA1Q15075 1411 aa24.5■■□□□ 1.51
ABCD4-218ENST00000553486 BIVM-ERCC5R4GMW8 1640 aa24.5■■□□□ 1.51
ABCD4-218ENST00000553486 TRHP20396 242 aaPredicted RBP24.49■■□□□ 1.51
ABCD4-218ENST00000553486 GRIN2AQ12879 1464 aa24.45■■□□□ 1.5
ABCD4-218ENST00000553486 ADAMTS12P58397 1594 aa24.43■■□□□ 1.5
ABCD4-218ENST00000553486 EHMT2Q96KQ7 1210 aa24.42■■□□□ 1.5
ABCD4-218ENST00000553486 FHAD1B1AJZ9 1412 aa24.38■■□□□ 1.49
ABCD4-218ENST00000553486 NUP160Q12769 1436 aa24.38■■□□□ 1.49
ABCD4-218ENST00000553486 ERICH3Q5RHP9 1530 aa24.36■■□□□ 1.49
ABCD4-218ENST00000553486 CSRNP3Q8WYN3 585 aa24.35■■□□□ 1.49
ABCD4-218ENST00000553486 CEP170Q5SW79 1584 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms