RNA–Protein interactions for RNA: ENST00000573448.1

RPH3AL-210, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 5

Gene RPH3AL, Length 487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-210ENST00000573448 NISCHQ9Y2I1 1504 aa30.09■■■□□ 2.41
RPH3AL-210ENST00000573448 CCDC180Q9P1Z9 1646 aa26.61■■□□□ 1.85
RPH3AL-210ENST00000573448 ABCC9O60706 1549 aa26.04■■□□□ 1.76
RPH3AL-210ENST00000573448 DCAF8L2P0C7V8 631 aa25.11■■□□□ 1.61
RPH3AL-210ENST00000573448 ZCCHC6Q5VYS8 1495 aaKnown RBP25.1■■□□□ 1.61
RPH3AL-210ENST00000573448 NACADO15069 1562 aa25.01■■□□□ 1.59
RPH3AL-210ENST00000573448 RB1CC1Q8TDY2 1594 aa25.01■■□□□ 1.59
RPH3AL-210ENST00000573448 MYO15BQ96JP2 1530 aa24.89■■□□□ 1.57
RPH3AL-210ENST00000573448 DCAF1Q9Y4B6 1507 aa24.86■■□□□ 1.57
RPH3AL-210ENST00000573448 UNC13AQ9UPW8 1703 aa24.48■■□□□ 1.51
RPH3AL-210ENST00000573448 PABPN1Q86U42 306 aaKnown RBP eCLIP24.39■■□□□ 1.49
RPH3AL-210ENST00000573448 SCRIBQ14160 1630 aa24.39■■□□□ 1.49
RPH3AL-210ENST00000573448 BICRAQ9NZM4 1560 aa24.34■■□□□ 1.49
RPH3AL-210ENST00000573448 SHROOM4Q9ULL8 1493 aa23.96■■□□□ 1.43
RPH3AL-210ENST00000573448 DNAJC5BQ9UF47 199 aa23.86■■□□□ 1.41
RPH3AL-210ENST00000573448 EIF4G1Q04637 1599 aaKnown RBP23.65■■□□□ 1.38
RPH3AL-210ENST00000573448 CC2D2AQ9P2K1 1620 aa23.52■■□□□ 1.36
RPH3AL-210ENST00000573448 CECR2Q9BXF3 1484 aa23.5■■□□□ 1.35
RPH3AL-210ENST00000573448 SMARCA4P51532 1647 aa23.31■■□□□ 1.32
RPH3AL-210ENST00000573448 BAZ1AQ9NRL2 1556 aaPredicted RBP23.27■■□□□ 1.32
RPH3AL-210ENST00000573448 MROH2BQ7Z745 1585 aa23.24■■□□□ 1.31
RPH3AL-210ENST00000573448 ATAD2BQ9ULI0 1458 aa23.17■■□□□ 1.3
RPH3AL-210ENST00000573448 NCAPD3P42695 1498 aa23.12■■□□□ 1.29
RPH3AL-210ENST00000573448 SMARCA2P51531 1590 aa23.08■■□□□ 1.29
RPH3AL-210ENST00000573448 PEG3Q9GZU2 1588 aa23.06■■□□□ 1.28
RPH3AL-210ENST00000573448 RSF1Q96T23 1441 aaPredicted RBP23.01■■□□□ 1.27
RPH3AL-210ENST00000573448 HMGXB3Q12766 1538 aa22.99■■□□□ 1.27
RPH3AL-210ENST00000573448 WIZO95785 1651 aa22.98■■□□□ 1.27
RPH3AL-210ENST00000573448 BAZ1BQ9UIG0 1483 aaKnown RBP22.96■■□□□ 1.27
RPH3AL-210ENST00000573448 TOP2AP11388 1531 aaKnown RBP22.7■■□□□ 1.22
RPH3AL-210ENST00000573448 NESP48681 1621 aa22.6■■□□□ 1.21
RPH3AL-210ENST00000573448 SUPT5HO00267 1087 aaKnown RBP22.54■■□□□ 1.2
RPH3AL-210ENST00000573448 CCDC88BA6NC98 1476 aa22.47■■□□□ 1.19
RPH3AL-210ENST00000573448 CADPSQ9ULU8 1353 aa22.46■■□□□ 1.19
RPH3AL-210ENST00000573448 LAMC3Q9Y6N6 1575 aa22.45■■□□□ 1.18
RPH3AL-210ENST00000573448 ERCC6Q03468 1493 aa22.36■■□□□ 1.17
RPH3AL-210ENST00000573448 CFTRP13569 1480 aa22.35■■□□□ 1.17
RPH3AL-210ENST00000573448 PDS5BQ9NTI5 1447 aa22.3■■□□□ 1.16
RPH3AL-210ENST00000573448 KIF21AQ7Z4S6 1674 aa22.26■■□□□ 1.15
RPH3AL-210ENST00000573448 FANCD2Q9BXW9 1451 aa22.21■■□□□ 1.15
RPH3AL-210ENST00000573448 THOC2Q8NI27 1593 aaKnown RBP22.17■■□□□ 1.14
RPH3AL-210ENST00000573448 CEP164Q9UPV0 1460 aa22.14■■□□□ 1.13
RPH3AL-210ENST00000573448 PRDM2Q13029 1718 aa22.1■■□□□ 1.13
RPH3AL-210ENST00000573448 MRC2Q9UBG0 1479 aa22.09■■□□□ 1.13
RPH3AL-210ENST00000573448 CUX2O14529 1486 aa22.06■■□□□ 1.12
RPH3AL-210ENST00000573448 WDR62O43379 1518 aa22.02■■□□□ 1.12
RPH3AL-210ENST00000573448 URB2Q14146 1524 aaKnown RBP22.01■■□□□ 1.11
RPH3AL-210ENST00000573448 TOPBP1Q92547 1522 aa21.87■■□□□ 1.09
RPH3AL-210ENST00000573448 DNMBPQ6XZF7 1577 aa21.82■■□□□ 1.08
RPH3AL-210ENST00000573448 CUX1P39880 1505 aa21.79■■□□□ 1.08
RPH3AL-210ENST00000573448 ABCC8Q09428 1581 aa21.78■■□□□ 1.08
RPH3AL-210ENST00000573448 POLA1P09884 1462 aaPredicted RBP21.71■■□□□ 1.07
RPH3AL-210ENST00000573448 FGD5Q6ZNL6 1462 aa21.67■■□□□ 1.06
RPH3AL-210ENST00000573448 IFT140Q96RY7 1462 aa21.66■■□□□ 1.06
RPH3AL-210ENST00000573448 WRNQ14191 1432 aaPredicted RBP eCLIP21.65■■□□□ 1.06
RPH3AL-210ENST00000573448 RAD54L2Q9Y4B4 1467 aa21.64■■□□□ 1.06
RPH3AL-210ENST00000573448 SYNJ1O43426 1573 aa21.64■■□□□ 1.05
RPH3AL-210ENST00000573448 ZNF608Q9ULD9 1512 aaPredicted RBP21.64■■□□□ 1.05
RPH3AL-210ENST00000573448 TARBP1Q13395 1621 aaKnown RBP21.62■■□□□ 1.05
RPH3AL-210ENST00000573448 SOGA1O94964 1423 aa21.6■■□□□ 1.05
RPH3AL-210ENST00000573448 TOP2BQ02880 1626 aa21.58■■□□□ 1.05
RPH3AL-210ENST00000573448 BIVM-ERCC5R4GMW8 1640 aa21.57■■□□□ 1.04
RPH3AL-210ENST00000573448 AQRO60306 1485 aaKnown RBP eCLIP21.52■■□□□ 1.04
RPH3AL-210ENST00000573448 TDRD9Q8NDG6 1382 aaKnown RBP21.5■■□□□ 1.03
RPH3AL-210ENST00000573448 EIF4G3O43432 1585 aaKnown RBP21.5■■□□□ 1.03
RPH3AL-210ENST00000573448 WDR97A6NE52 1622 aa21.46■■□□□ 1.03
RPH3AL-210ENST00000573448 ABCA10Q8WWZ4 1543 aa21.44■■□□□ 1.02
RPH3AL-210ENST00000573448 GAPVD1Q14C86 1478 aa21.35■■□□□ 1.01
RPH3AL-210ENST00000573448 ABCA5Q8WWZ7 1642 aa21.35■■□□□ 1.01
RPH3AL-210ENST00000573448 DNAJC5Q9H3Z4 198 aa21.32■■□□□ 1
RPH3AL-210ENST00000573448 GRIN2BQ13224 1484 aa21.31■■□□□ 1
RPH3AL-210ENST00000573448 SNAPC4Q5SXM2 1469 aa21.31■■□□□ 1
RPH3AL-210ENST00000573448 PBRM1Q86U86 1689 aa21.26■□□□□ 0.99
RPH3AL-210ENST00000573448 MAGI1Q96QZ7 1491 aaPredicted RBP21.22■□□□□ 0.99
RPH3AL-210ENST00000573448 TRIM41Q8WV44 630 aa21.22■□□□□ 0.99
RPH3AL-210ENST00000573448 FBLN2P98095 1184 aa21.2■□□□□ 0.98
RPH3AL-210ENST00000573448 CHD1O14646 1710 aa21.19■□□□□ 0.98
RPH3AL-210ENST00000573448 OSCARQ8IYS5 282 aa21.19■□□□□ 0.98
RPH3AL-210ENST00000573448 ERICH3Q5RHP9 1530 aa21.16■□□□□ 0.98
RPH3AL-210ENST00000573448 SYNJ2O15056 1496 aa21.16■□□□□ 0.98
RPH3AL-210ENST00000573448 KIF27Q86VH2 1401 aa21.16■□□□□ 0.98
RPH3AL-210ENST00000573448 ADAMTS12P58397 1594 aa21.14■□□□□ 0.98
RPH3AL-210ENST00000573448 RUSC2Q8N2Y8 1516 aa21.14■□□□□ 0.98
RPH3AL-210ENST00000573448 CHMP7Q8WUX9 453 aaPredicted RBP21.14■□□□□ 0.97
RPH3AL-210ENST00000573448 IGF1RP08069 1367 aa21.12■□□□□ 0.97
RPH3AL-210ENST00000573448 CHIC1Q5VXU3 224 aa21.12■□□□□ 0.97
RPH3AL-210ENST00000573448 FHAD1B1AJZ9 1412 aa21.09■□□□□ 0.97
RPH3AL-210ENST00000573448 GRIN2AQ12879 1464 aa21.06■□□□□ 0.96
RPH3AL-210ENST00000573448 CLASP1Q7Z460 1538 aa20.99■□□□□ 0.95
RPH3AL-210ENST00000573448 CEP170Q5SW79 1584 aa20.97■□□□□ 0.95
RPH3AL-210ENST00000573448 CUL7Q14999 1698 aa20.97■□□□□ 0.95
RPH3AL-210ENST00000573448 CARMIL1Q5VZK9 1371 aa20.97■□□□□ 0.95
RPH3AL-210ENST00000573448 NUP160Q12769 1436 aa20.96■□□□□ 0.95
RPH3AL-210ENST00000573448 ARHGEF11O15085 1522 aa20.88■□□□□ 0.93
RPH3AL-210ENST00000573448 RIMBP3CA6NJZ7 1639 aa20.86■□□□□ 0.93
RPH3AL-210ENST00000573448 RIMBP3BA6NNM3 1639 aa20.86■□□□□ 0.93
RPH3AL-210ENST00000573448 RIMBP3Q9UFD9 1639 aa20.86■□□□□ 0.93
RPH3AL-210ENST00000573448 FAM9AQ8IZU1 332 aaPredicted RBP20.86■□□□□ 0.93
RPH3AL-210ENST00000573448 RAPGEF2Q9Y4G8 1499 aa20.84■□□□□ 0.93
RPH3AL-210ENST00000573448 PRXQ9BXM0 1461 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms