RNA–Protein interactions for RNA: ENST00000495366.5

SSUH2-216, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 2

Gene SSUH2, Length 2,386 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-216ENST00000495366 NISCHQ9Y2I1 1504 aa32.43■■■□□ 2.78
SSUH2-216ENST00000495366 PELP1Q8IZL8 1130 aaKnown RBP29.7■■■□□ 2.35
SSUH2-216ENST00000495366 MYT1Q01538 1121 aa29.06■■■□□ 2.24
SSUH2-216ENST00000495366 HRCP23327 699 aa28.48■■■□□ 2.15
SSUH2-216ENST00000495366 TTBK1Q5TCY1 1321 aaPredicted RBP27.78■■■□□ 2.04
SSUH2-216ENST00000495366 CCDC180Q9P1Z9 1646 aa27.77■■■□□ 2.04
SSUH2-216ENST00000495366 SCAF1Q9H7N4 1312 aaKnown RBP27.54■■■□□ 2
SSUH2-216ENST00000495366 PPARGC1BQ86YN6 1023 aaKnown RBP27.48■■□□□ 1.99
SSUH2-216ENST00000495366 ZCCHC6Q5VYS8 1495 aaKnown RBP27.37■■□□□ 1.97
SSUH2-216ENST00000495366 SHROOM4Q9ULL8 1493 aa27.33■■□□□ 1.97
SSUH2-216ENST00000495366 PCGF6Q9BYE7 350 aa26.98■■□□□ 1.91
SSUH2-216ENST00000495366 DCAF8L2P0C7V8 631 aa26.9■■□□□ 1.9
SSUH2-216ENST00000495366 DCAF1Q9Y4B6 1507 aa26.64■■□□□ 1.85
SSUH2-216ENST00000495366 SUPT5HO00267 1087 aaKnown RBP26.63■■□□□ 1.85
SSUH2-216ENST00000495366 PRKCSHP14314 528 aaPredicted RBP26.62■■□□□ 1.85
SSUH2-216ENST00000495366 BCL11AQ9H165 835 aa26.61■■□□□ 1.85
SSUH2-216ENST00000495366 ACIN1Q9UKV3 1341 aaKnown RBP26.57■■□□□ 1.84
SSUH2-216ENST00000495366 MYO15BQ96JP2 1530 aa26.51■■□□□ 1.83
SSUH2-216ENST00000495366 ZEB1P37275 1124 aaPredicted RBP26.41■■□□□ 1.82
SSUH2-216ENST00000495366 CENPBP07199 599 aaPredicted RBP26.37■■□□□ 1.81
SSUH2-216ENST00000495366 FAM9AQ8IZU1 332 aaPredicted RBP26.3■■□□□ 1.8
SSUH2-216ENST00000495366 NEUROD1Q13562 356 aa26.29■■□□□ 1.8
SSUH2-216ENST00000495366 GTF3C3Q9Y5Q9 886 aa26.27■■□□□ 1.8
SSUH2-216ENST00000495366 ERICH6Q7L0X2 663 aa26.23■■□□□ 1.79
SSUH2-216ENST00000495366 APLP2Q06481 763 aa26.06■■□□□ 1.76
SSUH2-216ENST00000495366 TRIM26Q12899 539 aaPredicted RBP26.02■■□□□ 1.76
SSUH2-216ENST00000495366 ABCC9O60706 1549 aa25.95■■□□□ 1.74
SSUH2-216ENST00000495366 SCRIBQ14160 1630 aa25.93■■□□□ 1.74
SSUH2-216ENST00000495366 ANP32EQ9BTT0 268 aa25.82■■□□□ 1.72
SSUH2-216ENST00000495366 CHIC1Q5VXU3 224 aa25.76■■□□□ 1.71
SSUH2-216ENST00000495366 NACADO15069 1562 aa25.74■■□□□ 1.71
SSUH2-216ENST00000495366 RSF1Q96T23 1441 aaPredicted RBP25.52■■□□□ 1.68
SSUH2-216ENST00000495366 CSRNP3Q8WYN3 585 aa25.44■■□□□ 1.66
SSUH2-216ENST00000495366 RB1CC1Q8TDY2 1594 aa25.38■■□□□ 1.65
SSUH2-216ENST00000495366 DIEXFQ68CQ4 756 aaKnown RBP25.32■■□□□ 1.64
SSUH2-216ENST00000495366 CECR2Q9BXF3 1484 aa25.31■■□□□ 1.64
SSUH2-216ENST00000495366 MROH2BQ7Z745 1585 aa25.19■■□□□ 1.62
SSUH2-216ENST00000495366 CLSPNQ9HAW4 1339 aa25.08■■□□□ 1.6
SSUH2-216ENST00000495366 WIZO95785 1651 aa25.05■■□□□ 1.6
SSUH2-216ENST00000495366 UNC13AQ9UPW8 1703 aa25.05■■□□□ 1.6
SSUH2-216ENST00000495366 TSHZ2Q9NRE2 1034 aa25.04■■□□□ 1.6
SSUH2-216ENST00000495366 LOC105371045A0A1W2PR82 267 aa25.03■■□□□ 1.6
SSUH2-216ENST00000495366 BAZ1AQ9NRL2 1556 aaPredicted RBP24.93■■□□□ 1.58
SSUH2-216ENST00000495366 TRIM41Q8WV44 630 aa24.91■■□□□ 1.58
SSUH2-216ENST00000495366 SUPT16HQ9Y5B9 1047 aaKnown RBP24.79■■□□□ 1.56
SSUH2-216ENST00000495366 SMARCA4P51532 1647 aa24.78■■□□□ 1.56
SSUH2-216ENST00000495366 YTHDC1Q96MU7 727 aaKnown RBP24.78■■□□□ 1.56
SSUH2-216ENST00000495366 SLC24A1O60721 1099 aa24.75■■□□□ 1.55
SSUH2-216ENST00000495366 BICRAQ9NZM4 1560 aa24.73■■□□□ 1.55
SSUH2-216ENST00000495366 PABPN1Q86U42 306 aaKnown RBP eCLIP24.73■■□□□ 1.554e-7■■■□□ 16.6
SSUH2-216ENST00000495366 ANO8Q9HCE9 1232 aaPredicted RBP24.69■■□□□ 1.54
SSUH2-216ENST00000495366 UBE2Q2Q8WVN8 375 aa24.67■■□□□ 1.54
SSUH2-216ENST00000495366 TOP2AP11388 1531 aaKnown RBP24.65■■□□□ 1.54
SSUH2-216ENST00000495366 CCER1Q8TC90 406 aaPredicted RBP24.59■■□□□ 1.53
SSUH2-216ENST00000495366 ZNF316A6NFI3 1004 aaPredicted RBP24.58■■□□□ 1.53
SSUH2-216ENST00000495366 EIF4G1Q04637 1599 aaKnown RBP24.58■■□□□ 1.52
SSUH2-216ENST00000495366 MYT1LQ9UL68 1186 aa24.54■■□□□ 1.52
SSUH2-216ENST00000495366 CCDC88BA6NC98 1476 aa24.53■■□□□ 1.52
SSUH2-216ENST00000495366 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.51■■□□□ 1.51
SSUH2-216ENST00000495366 SMARCA2P51531 1590 aa24.51■■□□□ 1.51
SSUH2-216ENST00000495366 MIER1Q8N108 512 aa24.48■■□□□ 1.51
SSUH2-216ENST00000495366 ERICH6BQ5W0A0 696 aa24.43■■□□□ 1.5
SSUH2-216ENST00000495366 EIF5BO60841 1220 aaKnown RBP24.42■■□□□ 1.5
SSUH2-216ENST00000495366 EHMT2Q96KQ7 1210 aa24.39■■□□□ 1.49
SSUH2-216ENST00000495366 ABCC8Q09428 1581 aa24.35■■□□□ 1.49
SSUH2-216ENST00000495366 PEG3Q9GZU2 1588 aa24.34■■□□□ 1.49
SSUH2-216ENST00000495366 RBM19Q9Y4C8 960 aaKnown RBP24.31■■□□□ 1.48
SSUH2-216ENST00000495366 DAXXQ9UER7 740 aaPredicted RBP24.3■■□□□ 1.48
SSUH2-216ENST00000495366 SALL2Q9Y467 1007 aaPredicted RBP24.28■■□□□ 1.48
SSUH2-216ENST00000495366 ATAD2BQ9ULI0 1458 aa24.21■■□□□ 1.47
SSUH2-216ENST00000495366 MSH5O43196 834 aa24.21■■□□□ 1.47
SSUH2-216ENST00000495366 DEKP35659 375 aaKnown RBP24.18■■□□□ 1.46
SSUH2-216ENST00000495366 BAZ1BQ9UIG0 1483 aaKnown RBP24.12■■□□□ 1.45
SSUH2-216ENST00000495366 FANCIQ9NVI1 1328 aa24.09■■□□□ 1.45
SSUH2-216ENST00000495366 SOGA1O94964 1423 aa24.05■■□□□ 1.44
SSUH2-216ENST00000495366 CCDC136Q96JN2 1154 aa24.03■■□□□ 1.44
SSUH2-216ENST00000495366 PKNOX2Q96KN3 472 aa23.98■■□□□ 1.43
SSUH2-216ENST00000495366 WRNQ14191 1432 aaPredicted RBP eCLIP23.97■■□□□ 1.43
SSUH2-216ENST00000495366 RUSC2Q8N2Y8 1516 aa23.95■■□□□ 1.42
SSUH2-216ENST00000495366 SYNJ1O43426 1573 aa23.89■■□□□ 1.42
SSUH2-216ENST00000495366 EEA1Q15075 1411 aa23.86■■□□□ 1.41
SSUH2-216ENST00000495366 NCAPD3P42695 1498 aa23.81■■□□□ 1.4
SSUH2-216ENST00000495366 HMGXB3Q12766 1538 aa23.79■■□□□ 1.4
SSUH2-216ENST00000495366 BCANQ96GW7 911 aa23.78■■□□□ 1.4
SSUH2-216ENST00000495366 CEP162Q5TB80 1403 aa23.76■■□□□ 1.39
SSUH2-216ENST00000495366 TNIKQ9UKE5 1360 aa23.76■■□□□ 1.39
SSUH2-216ENST00000495366 PLEKHG5O94827 1062 aa23.73■■□□□ 1.39
SSUH2-216ENST00000495366 FKBP8Q14318 412 aa23.73■■□□□ 1.39
SSUH2-216ENST00000495366 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.72■■□□□ 1.39
SSUH2-216ENST00000495366 UBTFP17480 764 aaKnown RBP23.71■■□□□ 1.39
SSUH2-216ENST00000495366 GOLGA3Q08378 1498 aa23.68■■□□□ 1.38
SSUH2-216ENST00000495366 PODXL2Q9NZ53 605 aa23.68■■□□□ 1.38
SSUH2-216ENST00000495366 TOP2BQ02880 1626 aa23.64■■□□□ 1.37
SSUH2-216ENST00000495366 IL27Q8NEV9 243 aa23.6■■□□□ 1.37
SSUH2-216ENST00000495366 CEP164Q9UPV0 1460 aa23.58■■□□□ 1.37
SSUH2-216ENST00000495366 KIF21BO75037 1637 aa23.58■■□□□ 1.37
SSUH2-216ENST00000495366 BIVM-ERCC5R4GMW8 1640 aa23.57■■□□□ 1.36
SSUH2-216ENST00000495366 NEFLP07196 543 aa23.56■■□□□ 1.36
SSUH2-216ENST00000495366 CFTRP13569 1480 aa23.52■■□□□ 1.36
SSUH2-216ENST00000495366 CUX1P39880 1505 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms