RNA–Protein interactions for RNA: ENST00000563266.1

KIFC3-214, Transcript of kinesin family member C3, humanhuman

TSL 2

Gene KIFC3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-214ENST00000563266 NISCHQ9Y2I1 1504 aa32.92■■■□□ 2.86
KIFC3-214ENST00000563266 CCDC180Q9P1Z9 1646 aa29.42■■■□□ 2.3
KIFC3-214ENST00000563266 ABCC9O60706 1549 aa29.01■■■□□ 2.23
KIFC3-214ENST00000563266 RB1CC1Q8TDY2 1594 aa27.86■■■□□ 2.05
KIFC3-214ENST00000563266 NACADO15069 1562 aa27.78■■■□□ 2.04
KIFC3-214ENST00000563266 DCAF8L2P0C7V8 631 aa27.65■■■□□ 2.02
KIFC3-214ENST00000563266 MYO15BQ96JP2 1530 aa27.57■■■□□ 2
KIFC3-214ENST00000563266 ZCCHC6Q5VYS8 1495 aaKnown RBP27.35■■□□□ 1.97
KIFC3-214ENST00000563266 DCAF1Q9Y4B6 1507 aa27.3■■□□□ 1.96
KIFC3-214ENST00000563266 PABPN1Q86U42 306 aaKnown RBP eCLIP27.06■■□□□ 1.92
KIFC3-214ENST00000563266 UNC13AQ9UPW8 1703 aa27.04■■□□□ 1.92
KIFC3-214ENST00000563266 BICRAQ9NZM4 1560 aa26.91■■□□□ 1.9
KIFC3-214ENST00000563266 DNAJC5BQ9UF47 199 aa26.85■■□□□ 1.89
KIFC3-214ENST00000563266 SHROOM4Q9ULL8 1493 aa26.82■■□□□ 1.88
KIFC3-214ENST00000563266 SCRIBQ14160 1630 aa26.73■■□□□ 1.87
KIFC3-214ENST00000563266 EIF4G1Q04637 1599 aaKnown RBP26.28■■□□□ 1.8
KIFC3-214ENST00000563266 CC2D2AQ9P2K1 1620 aa26.23■■□□□ 1.79
KIFC3-214ENST00000563266 CECR2Q9BXF3 1484 aa26.16■■□□□ 1.78
KIFC3-214ENST00000563266 NCAPD3P42695 1498 aa25.63■■□□□ 1.69
KIFC3-214ENST00000563266 BAZ1AQ9NRL2 1556 aaPredicted RBP25.58■■□□□ 1.69
KIFC3-214ENST00000563266 SMARCA4P51532 1647 aa25.58■■□□□ 1.69
KIFC3-214ENST00000563266 SMARCA2P51531 1590 aa25.56■■□□□ 1.68
KIFC3-214ENST00000563266 ATAD2BQ9ULI0 1458 aa25.55■■□□□ 1.68
KIFC3-214ENST00000563266 HMGXB3Q12766 1538 aa25.46■■□□□ 1.67
KIFC3-214ENST00000563266 PEG3Q9GZU2 1588 aa25.39■■□□□ 1.65
KIFC3-214ENST00000563266 BAZ1BQ9UIG0 1483 aaKnown RBP25.34■■□□□ 1.65
KIFC3-214ENST00000563266 MROH2BQ7Z745 1585 aa25.31■■□□□ 1.64
KIFC3-214ENST00000563266 ERCC6Q03468 1493 aa25.12■■□□□ 1.61
KIFC3-214ENST00000563266 CUX2O14529 1486 aa24.99■■□□□ 1.59
KIFC3-214ENST00000563266 LAMC3Q9Y6N6 1575 aa24.99■■□□□ 1.59
KIFC3-214ENST00000563266 WIZO95785 1651 aa24.98■■□□□ 1.59
KIFC3-214ENST00000563266 NESP48681 1621 aa24.97■■□□□ 1.59
KIFC3-214ENST00000563266 RSF1Q96T23 1441 aaPredicted RBP24.96■■□□□ 1.59
KIFC3-214ENST00000563266 PDS5BQ9NTI5 1447 aa24.9■■□□□ 1.58
KIFC3-214ENST00000563266 CADPSQ9ULU8 1353 aa24.87■■□□□ 1.57
KIFC3-214ENST00000563266 TOP2AP11388 1531 aaKnown RBP24.79■■□□□ 1.56
KIFC3-214ENST00000563266 THOC2Q8NI27 1593 aaKnown RBP24.68■■□□□ 1.54
KIFC3-214ENST00000563266 KIF21AQ7Z4S6 1674 aa24.65■■□□□ 1.54
KIFC3-214ENST00000563266 CFTRP13569 1480 aa24.64■■□□□ 1.54
KIFC3-214ENST00000563266 MRC2Q9UBG0 1479 aa24.58■■□□□ 1.53
KIFC3-214ENST00000563266 CEP164Q9UPV0 1460 aa24.57■■□□□ 1.52
KIFC3-214ENST00000563266 DNAJC5Q9H3Z4 198 aa24.56■■□□□ 1.52
KIFC3-214ENST00000563266 FANCD2Q9BXW9 1451 aa24.55■■□□□ 1.52
KIFC3-214ENST00000563266 CCDC88BA6NC98 1476 aa24.49■■□□□ 1.51
KIFC3-214ENST00000563266 WDR62O43379 1518 aa24.49■■□□□ 1.51
KIFC3-214ENST00000563266 PRDM2Q13029 1718 aa24.35■■□□□ 1.49
KIFC3-214ENST00000563266 URB2Q14146 1524 aaKnown RBP24.27■■□□□ 1.48
KIFC3-214ENST00000563266 ABCC8Q09428 1581 aa24.21■■□□□ 1.47
KIFC3-214ENST00000563266 TOPBP1Q92547 1522 aa24.1■■□□□ 1.45
KIFC3-214ENST00000563266 SUPT5HO00267 1087 aaKnown RBP24.1■■□□□ 1.45
KIFC3-214ENST00000563266 IFT140Q96RY7 1462 aa24.09■■□□□ 1.45
KIFC3-214ENST00000563266 DNMBPQ6XZF7 1577 aa24.06■■□□□ 1.44
KIFC3-214ENST00000563266 OSCARQ8IYS5 282 aa23.93■■□□□ 1.42
KIFC3-214ENST00000563266 ZNF608Q9ULD9 1512 aaPredicted RBP23.89■■□□□ 1.42
KIFC3-214ENST00000563266 POLA1P09884 1462 aaPredicted RBP23.87■■□□□ 1.41
KIFC3-214ENST00000563266 TARBP1Q13395 1621 aaKnown RBP23.83■■□□□ 1.41
KIFC3-214ENST00000563266 SOGA1O94964 1423 aa23.82■■□□□ 1.4
KIFC3-214ENST00000563266 EIF4G3O43432 1585 aaKnown RBP23.79■■□□□ 1.4
KIFC3-214ENST00000563266 CUX1P39880 1505 aa23.78■■□□□ 1.4
KIFC3-214ENST00000563266 FGD5Q6ZNL6 1462 aa23.76■■□□□ 1.39
KIFC3-214ENST00000563266 WDR97A6NE52 1622 aa23.75■■□□□ 1.39
KIFC3-214ENST00000563266 AQRO60306 1485 aaKnown RBP eCLIP23.75■■□□□ 1.394e-7■■■■■ 50.4
KIFC3-214ENST00000563266 RAD54L2Q9Y4B4 1467 aa23.73■■□□□ 1.39
KIFC3-214ENST00000563266 TDRD9Q8NDG6 1382 aaKnown RBP23.67■■□□□ 1.38
KIFC3-214ENST00000563266 GRIN2BQ13224 1484 aa23.6■■□□□ 1.37
KIFC3-214ENST00000563266 FBLN2P98095 1184 aa23.59■■□□□ 1.37
KIFC3-214ENST00000563266 WRNQ14191 1432 aaPredicted RBP eCLIP23.59■■□□□ 1.37
KIFC3-214ENST00000563266 MAGI1Q96QZ7 1491 aaPredicted RBP23.57■■□□□ 1.36
KIFC3-214ENST00000563266 ABCA10Q8WWZ4 1543 aa23.57■■□□□ 1.36
KIFC3-214ENST00000563266 TRIM41Q8WV44 630 aa23.56■■□□□ 1.36
KIFC3-214ENST00000563266 SNAPC4Q5SXM2 1469 aa23.54■■□□□ 1.36
KIFC3-214ENST00000563266 GAPVD1Q14C86 1478 aa23.53■■□□□ 1.36
KIFC3-214ENST00000563266 TOP2BQ02880 1626 aa23.52■■□□□ 1.36
KIFC3-214ENST00000563266 CHMP7Q8WUX9 453 aaPredicted RBP23.52■■□□□ 1.36
KIFC3-214ENST00000563266 CHD1O14646 1710 aa23.5■■□□□ 1.35
KIFC3-214ENST00000563266 BIVM-ERCC5R4GMW8 1640 aa23.5■■□□□ 1.35
KIFC3-214ENST00000563266 SYNJ2O15056 1496 aa23.46■■□□□ 1.35
KIFC3-214ENST00000563266 ABCA5Q8WWZ7 1642 aa23.44■■□□□ 1.34
KIFC3-214ENST00000563266 ARHGEF11O15085 1522 aa23.43■■□□□ 1.34
KIFC3-214ENST00000563266 RIMBP3CA6NJZ7 1639 aa23.43■■□□□ 1.34
KIFC3-214ENST00000563266 RIMBP3BA6NNM3 1639 aa23.43■■□□□ 1.34
KIFC3-214ENST00000563266 RIMBP3Q9UFD9 1639 aa23.43■■□□□ 1.34
KIFC3-214ENST00000563266 SYNJ1O43426 1573 aa23.43■■□□□ 1.34
KIFC3-214ENST00000563266 PBRM1Q86U86 1689 aa23.4■■□□□ 1.34
KIFC3-214ENST00000563266 CLASP1Q7Z460 1538 aa23.31■■□□□ 1.32
KIFC3-214ENST00000563266 ERICH3Q5RHP9 1530 aa23.3■■□□□ 1.32
KIFC3-214ENST00000563266 FHAD1B1AJZ9 1412 aa23.28■■□□□ 1.32
KIFC3-214ENST00000563266 CYB5RLQ6IPT4 315 aa23.27■■□□□ 1.32
KIFC3-214ENST00000563266 GRIN2AQ12879 1464 aa23.24■■□□□ 1.31
KIFC3-214ENST00000563266 ADAMTS12P58397 1594 aa23.23■■□□□ 1.31
KIFC3-214ENST00000563266 ARAP1Q96P48 1450 aa23.21■■□□□ 1.31
KIFC3-214ENST00000563266 NUP160Q12769 1436 aa23.16■■□□□ 1.3
KIFC3-214ENST00000563266 KIF27Q86VH2 1401 aa23.16■■□□□ 1.3
KIFC3-214ENST00000563266 CEP170Q5SW79 1584 aa23.08■■□□□ 1.29
KIFC3-214ENST00000563266 IGF1RP08069 1367 aa23.05■■□□□ 1.28
KIFC3-214ENST00000563266 CUL7Q14999 1698 aa23.01■■□□□ 1.27
KIFC3-214ENST00000563266 SHROOM2Q13796 1616 aa22.98■■□□□ 1.27
KIFC3-214ENST00000563266 JPH4Q96JJ6 628 aa22.98■■□□□ 1.27
KIFC3-214ENST00000563266 CARMIL1Q5VZK9 1371 aa22.93■■□□□ 1.26
KIFC3-214ENST00000563266 TRHP20396 242 aaPredicted RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms